BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,880,319	T→C	P147P (CCA→CCG)	leuE ←	leucine exporter

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,880,319	0	T	C	100.0%	1257.8 / NA	296	P147P (CCA→CCG)	leuE	leucine exporter
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (129/167); total (129/167)

Only 100 of 296 total aligned reads displayed.

TGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAG  >  NC_000913/1880221‑1880416

 gCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCggg                                                                                                <  1:2741524/101‑1 (MQ=255)

  cGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGGATGAAATTCTCGTATGCgggg                                                                                               <  1:2741960/101‑1 (MQ=255)

  cGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCgggg                                                                                               <  2:2741885/101‑1 (MQ=255)

   gTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGc                                                                                              >  1:2742141/1‑101 (MQ=255)

    tGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCa                                                                                             >  1:2742144/1‑101 (MQ=255)

    tGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCa                                                                                             <  2:2741597/101‑1 (MQ=255)

    tGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCa                                                                                             >  2:2742146/1‑101 (MQ=255)

      aCAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCAtt                                                                                           <  1:2741691/101‑1 (MQ=255)

       cAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTa                                                                                          <  1:2741661/101‑1 (MQ=255)

        aaaaGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTaa                                                                                         >  1:2742150/1‑101 (MQ=255)

          aaGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACa                                                                                       >  1:2742155/1‑101 (MQ=255)

          aaGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACa                                                                                       >  2:2742154/1‑101 (MQ=255)

          aaGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACa                                                                                       <  1:2741471/101‑1 (MQ=255)

             cACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCg                                                                                    >  2:2742159/1‑101 (MQ=255)

              aCCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGa                                                                                   <  1:2741893/101‑1 (MQ=255)

                  gATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATaaa                                                                               >  2:2742162/1‑101 (MQ=255)

                   atatAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAAc                                                                              <  1:2741697/101‑1 (MQ=255)

                   atatAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAAc                                                                              >  1:2742163/1‑101 (MQ=255)

                   atatAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAAc                                                                              <  2:2741713/101‑1 (MQ=255)

                    tataATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACt                                                                             <  2:2741554/101‑1 (MQ=255)

                     ataATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTg                                                                            >  1:2742172/1‑101 (MQ=255)

                     ataATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTg                                                                            >  2:2742167/1‑101 (MQ=255)

                     ataATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTg                                                                            >  1:2742169/1‑101 (MQ=255)

                       aaTCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTa                                                                          <  1:2741937/101‑1 (MQ=255)

                       aaTCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTa                                                                          <  1:2741684/101‑1 (MQ=255)

                        aTCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTAc                                                                         >  2:2742176/1‑101 (MQ=255)

                        aTCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTAc                                                                         <  1:2741768/101‑1 (MQ=255)

                        aTCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTAc                                                                         <  2:2741644/101‑1 (MQ=255)

                         tCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACg                                                                        <  2:2741660/101‑1 (MQ=255)

                         tCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACg                                                                        >  1:2742178/1‑101 (MQ=255)

                           aGGAAGCTCAAATAGCAGAGACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGaa                                                                      >  1:2742182/1‑101 (MQ=255)

                            ggAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCggg                                                                                                >  1:2742186/1‑74 (MQ=255)

                             gAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGaaaa                                                                    <  1:2741550/101‑1 (MQ=255)

                              aaGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGaaaaa                                                                   <  1:2741595/101‑1 (MQ=255)

                               aGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAAc                                                                  <  1:2741831/101‑1 (MQ=255)

                                 cTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGa                                                                >  2:2742188/1‑101 (MQ=255)

                                 cTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGa                                                                <  2:2741737/101‑1 (MQ=255)

                                    aaaTAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGacac                                                             >  1:2742191/1‑101 (MQ=255)

                                       tAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATa                                                          >  1:2742195/1‑101 (MQ=255)

                                       tAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATa                                                          <  1:2741820/101‑1 (MQ=255)

                                         gCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGa                                                        <  2:2741777/101‑1 (MQ=255)

                                           aGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAAc                                                      <  1:2741678/101‑1 (MQ=255)

                                           aGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAAc                                                      >  2:2742198/1‑101 (MQ=255)

                                            gAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACa                                                     >  1:2742200/1‑101 (MQ=255)

                                             aaaCTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACaa                                                    >  1:2742205/1‑101 (MQ=255)

                                             aaaCTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACaa                                                    >  2:2742204/1‑101 (MQ=255)

                                                cTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAAt                                                 <  1:2741749/101‑1 (MQ=255)

                                                cTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAAt                                                 <  1:2741758/101‑1 (MQ=255)

                                                cTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAAt                                                 <  1:2741785/101‑1 (MQ=255)

                                                 tCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATg                                                <  2:2741865/101‑1 (MQ=255)

                                                  cACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATgg                                               <  2:2742084/101‑1 (MQ=255)

                                                    ccAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATaaa                                                                               <  1:2741611/67‑1 (MQ=255)

                                                     cAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCtt                                            >  1:2742210/1‑101 (MQ=255)

                                                      aGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCttt                                           >  2:2742211/1‑101 (MQ=255)

                                                       gTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTc                                          <  2:2741955/101‑1 (MQ=255)

                                                        ttCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTCg                                         <  2:2741763/101‑1 (MQ=255)

                                                        ttCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTCg                                         >  1:2742215/1‑101 (MQ=255)

                                                          ccAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTCGGa                                       <  1:2742059/101‑1 (MQ=255)

                                                            aGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTCGGAtt                                     <  2:2741917/101‑1 (MQ=255)

                                                            aGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTCGGAtt                                     <  1:2741712/101‑1 (MQ=255)

                                                             gCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTCGGATTa                                    <  2:2741988/101‑1 (MQ=255)

                                                              cGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTCGGATTAg                                   >  2:2742217/1‑101 (MQ=255)

                                                                 cgccgcCAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGa                                                                <  1:2741667/69‑1 (MQ=255)

                                                                  gccgccAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTCGGATTAGTCAg                               >  1:2742222/1‑101 (MQ=255)

                                                                  gccgccAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTCGGATTAGTCAg                               >  2:2742223/1‑101 (MQ=255)

                                                                    cgccAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTc                                          <  2:2741890/88‑1 (MQ=255)

                                                                      ccAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTCGGATTAGTCAGGCTc                           >  2:2742228/1‑101 (MQ=255)

                                                                       cAGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCa                          >  1:2742229/1‑101 (MQ=255)

                                                                        aGAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCaa                         <  2:2741746/101‑1 (MQ=255)

                                                                         gAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCaaa                        <  1:2741633/101‑1 (MQ=255)

                                                                         gAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCaaa                        >  2:2742234/1‑101 (MQ=255)

                                                                         gAATAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCaaa                        >  1:2742233/1‑101 (MQ=255)

                                                                           aTAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAAt                      >  1:2742238/1‑101 (MQ=255)

                                                                            tAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAAtt                     <  1:2741849/101‑1 (MQ=255)

                                                                            tAAAGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAAtt                     <  2:2741943/101‑1 (MQ=255)

                                                                             aaaGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTa                    >  2:2742241/1‑101 (MQ=255)

                                                                              aaGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTaa                   <  2:2741904/101‑1 (MQ=255)

                                                                              aaGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTaa                   <  2:2741528/101‑1 (MQ=255)

                                                                               aGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAAc                  >  2:2742244/1‑101 (MQ=255)

                                                                               aGAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAAc                  <  1:2741780/101‑1 (MQ=255)

                                                                                gAATGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAAcg                 >  1:2742247/1‑101 (MQ=255)

                                                                                 aaTGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAAcgc                <  1:2741929/101‑1 (MQ=255)

                                                                                 aaTGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAAcgc                <  1:2741882/101‑1 (MQ=255)

                                                                                  aTGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAAcgcg               >  1:2742250/1‑101 (MQ=255)

                                                                                   tGAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAAcgcgc              <  1:2741728/101‑1 (MQ=255)

                                                                                    gAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAAcgcgcg             >  2:2742253/1‑101 (MQ=255)

                                                                                    gAAATTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAAcgcgcg             <  2:2741682/101‑1 (MQ=255)

                                                                                     aaaTTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGt            <  1:2741795/101‑1 (MQ=255)

                                                                                      aaTTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGtt           >  1:2742257/1‑101 (MQ=255)

                                                                                       aTTCCCGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGttt          >  2:2742258/1‑101 (MQ=255)

                                                                                          cccGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTaaa       >  2:2742262/1‑101 (MQ=255)

                                                                                           ccGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTaaaa      <  2:2741612/101‑1 (MQ=255)

                                                                                           ccGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTaaaa      <  2:2741803/101‑1 (MQ=255)

                                                                                            cGTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTaaaaa     <  1:2741872/101‑1 (MQ=255)

                                                                                             gTATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAAt    <  2:2742054/101‑1 (MQ=255)

                                                                                              tATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTTGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATa   <  1:2741910/101‑1 (MQ=255)

                                                                                              tATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATa   <  1:2741802/101‑1 (MQ=255)

                                                                                              tATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATa   <  1:2742023/101‑1 (MQ=255)

                                                                                              tATGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATa   <  2:2741841/101‑1 (MQ=255)

                                                                                               aTGCGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAg  >  1:2742265/1‑101 (MQ=255)

TGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACACATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAG  >  NC_000913/1880221‑1880416

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`