| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,154,123 | C→T | A36A (GCC→GCT) | mdtA → | multidrug efflux pump membrane fusion protein MdtA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,154,123 | 0 | C | T | 99.6% | 1025.5 / NA | 244 | A36A (GCC→GCT) | mdtA | multidrug efflux pump membrane fusion protein MdtA |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base T (128/115); minor base A (1/0); total (129/115) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 247 total aligned reads displayed.
AGTTATAAATCCCGTTGGGTAATCGTAATCGTGGTGGTTATCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCCCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTCCGGCCCATTAGCCCCGGTTCAGGCGGCGACCGCCGTAG > NC_000913/2154025‑2154220 | gTTATAAATCCCGTTGGGTAATCGTAATCGTGGTGGTTATCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCa > 1:3135874/1‑101 (MQ=255) ttATAAATCCCGTTGGGTAATCGTAATCGTGGTGGTTATCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAg > 2:3135876/1‑101 (MQ=255) ataAATCCCGTTGGGTAATCGTAATCGTGGTGGTTATCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAggg < 1:3135201/101‑1 (MQ=255) ataAATCCCGTTGGGTAATCGTAATCGTGGTGGTTATCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAggg > 1:3135879/1‑101 (MQ=255) taAATCCCGTTGGGTAATCGTAATCGTGGTGGTTATCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAgggg > 2:3135881/1‑101 (MQ=255) aaaTCCCGTTGGGTAATCGTAATCGTGGTGGTTATCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGc > 2:3135886/1‑101 (MQ=255) aaaTCCCGTTGGGTAATCGTAATCGTGGTGGTTATCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGc > 1:3135885/1‑101 (MQ=255) aaaTCCCGTTGGGTAATCGTAATCGTGGTGGTTATCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGc > 1:3135888/1‑101 (MQ=255) aaTCCCGTTGGGTAATCGTAATCGTGGTGGTTATCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGcg < 1:3135372/101‑1 (MQ=255) aaTCCCGTTGGGTAATCGTAATCGTGGTGGTTATCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGcg < 1:3135616/101‑1 (MQ=255) aTCCCGTTGGGTAATCGTAATCGTGGTGGTTATCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGcga < 2:3134932/101‑1 (MQ=255) cccGTTGGGTAATCGTAATCGTGGTGGTTATCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGcgacg > 2:3135894/1‑101 (MQ=255) cccGTTGGGTAATCGTAATCGTGGTGGTTATCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGcgacg > 2:3135892/1‑101 (MQ=255) cccGTTGGGTAATCGTAATCGTGGTGGTTATCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGcgacg < 2:3135626/101‑1 (MQ=255) ccGTTGGGTAATCGTAATCGTGGTGGTTATCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGcga < 2:3135235/98‑1 (MQ=255) gTTGGGTAATCGTAATCGTGGTGGTTATCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGaaa > 2:3135898/1‑101 (MQ=255) ttGGGTAATCGTAATCGTGGTGGTTATCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAAc < 1:3135550/101‑1 (MQ=255) ttGGGTAATCGTAATCGTGGTGGTTATCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAAc < 1:3135540/101‑1 (MQ=255) tGGGTAATCGTAATCGTGGTGGTTATCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACa > 2:3135900/1‑101 (MQ=255) gggTAATCGTAATCGTGGTGGTTATCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACaa > 1:3135902/1‑101 (MQ=255) gggTAATCGTAATCGTGGTGGTTATCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACaa < 1:3135346/101‑1 (MQ=255) taatcgtaatcgTGGTGGTTATCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGcg < 2:3135394/89‑1 (MQ=255) atcgtaatcgtGGTGGTTATCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCgca > 1:3135904/1‑101 (MQ=255) taatcgtGGTGGTTATCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCaa > 2:3135909/1‑101 (MQ=255) taatcgtGGTGGTTATCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCaa > 1:3135910/1‑101 (MQ=255) aatcgtGGTGGTTATCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAAt < 1:3135432/101‑1 (MQ=255) aatcgtGGTGGTTATCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAAt > 1:3135912/1‑101 (MQ=255) aatcgtGGTGGTTATCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAAt > 2:3135914/1‑101 (MQ=255) atcgtGGTGGTTATCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATc < 1:3135557/101‑1 (MQ=255) cgtGGTGGTTATCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGc > 2:3135918/1‑101 (MQ=255) tggtggTTATCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCa < 2:3135463/101‑1 (MQ=255) tggtggTTATCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCa < 2:3135669/101‑1 (MQ=255) tggtggTTATCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCa > 1:3135921/1‑101 (MQ=255) ggtggtTATCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAg > 2:3135922/1‑101 (MQ=255) gtggtTATCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGc < 2:3135471/101‑1 (MQ=255) tggtTATCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCg > 1:3135924/1‑101 (MQ=255) ggtTATCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCgg < 2:3135415/101‑1 (MQ=255) ttATCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGggt > 2:3135927/1‑101 (MQ=255) ttATCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGggt < 1:3135686/101‑1 (MQ=255) tATCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGc > 1:3135930/1‑96 (MQ=255) tATCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGggtg < 1:3135483/101‑1 (MQ=255) aTCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGggtgg > 2:3135931/1‑101 (MQ=255) gccgccATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCg < 1:3135505/101‑1 (MQ=255) gccgccATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCg > 2:3135934/1‑101 (MQ=255) gccATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACg > 1:3135936/1‑101 (MQ=255) cgccgcATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGcg < 2:3135434/58‑1 (MQ=255) cgccgcATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTa < 1:3135529/101‑1 (MQ=255) gccgcATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTAt > 1:3135939/1‑101 (MQ=255) cgcATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGc < 2:3135586/101‑1 (MQ=255) cgcATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGc < 2:3135703/101‑1 (MQ=255) cgcATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGc < 2:3135497/101‑1 (MQ=255) gcATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCg < 1:3135627/101‑1 (MQ=255) gcATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCg > 2:3135943/1‑101 (MQ=255) aTTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTgg > 2:3135949/1‑93 (MQ=255) aTTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGtt > 1:3135945/1‑101 (MQ=255) ttctggttctggCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTc < 2:3135609/101‑1 (MQ=255) ctggttctggCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTCCg < 2:3135309/101‑1 (MQ=255) ctggttctggCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTCCg > 1:3135951/1‑101 (MQ=255) tggttctggCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTCCgg < 1:3135714/101‑1 (MQ=255) gttctggCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCggg > 1:3135957/1‑75 (MQ=255) gttctggCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTCCGGcc > 2:3135956/1‑101 (MQ=255) tctggCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTCCGGCCCa < 2:3135813/101‑1 (MQ=255) ctggCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTCCGGCCCAt > 2:3135959/1‑101 (MQ=255) tggCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTCCg < 2:3135768/94‑1 (MQ=255) tggCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTCCGGCCCAtt < 1:3135679/101‑1 (MQ=255) ggCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGggtggt < 2:3135544/74‑1 (MQ=255) ggCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTCCGGCCCATTa < 1:3135475/101‑1 (MQ=255) ggCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTCCGGCCCATTa < 2:3135578/101‑1 (MQ=255) gCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTCCGGCCCATTAg < 2:3135379/101‑1 (MQ=255) gCAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTCCGGCCCATTAg > 2:3135963/1‑101 (MQ=255) cAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTCCGGCCCATTAGc > 2:3135967/1‑101 (MQ=255) cAAGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTCCGGCCCATTAGc > 1:3135966/1‑101 (MQ=255) aGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTCCGGCCCATTAGccc < 1:3135631/101‑1 (MQ=255) aGGCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTCCGGCCCATTAGccc > 1:3135970/1‑101 (MQ=255) ggCCGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTCCGGCCCATTAGcccc > 2:3135972/1‑101 (MQ=255) ccGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTCCGGCCCATTAGCCCCgg > 2:3135977/1‑101 (MQ=255) ccGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTCCGGCCCATTAGCCCCgg > 1:3135976/1‑101 (MQ=255) ccGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTCCGGCCCATTAGCCCCgg < 2:3135361/101‑1 (MQ=255) cGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTCCGGCCCATTAGCCCCGGt < 1:3135729/101‑1 (MQ=255) cGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTCCGGCCCATTAGCCCCGGt < 1:3135450/101‑1 (MQ=255) cGCAATGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTCCGGCCCATTAGCCCCGGt > 1:3135979/1‑101 (MQ=255) gaaaTGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCg < 1:3135520/77‑1 (MQ=255) aaTGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTCCGGCCCATTAGCCCCGGTTCa > 2:3135984/1‑101 (MQ=255) aTGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTCCGGCCCATTAGCCCCGGTTCAg < 1:3135587/101‑1 (MQ=255) aTGACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTCCGGCCCATTAGCCCCGGTTCAg > 1:3135985/1‑101 (MQ=255) gACTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTCCGGCCCATTAGCCCCGGTTCAggc < 2:3135481/101‑1 (MQ=255) cTCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTCCGGCCCATTAGCCCCGGTTCAggcgg > 1:3135988/1‑101 (MQ=255) tCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTCCgg > 2:3135990/1‑77 (MQ=255) tCCCGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTCCGGCCCATTAGCCCCGGTTCAggcggc < 1:3135600/101‑1 (MQ=255) cccGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTCCGGCCCATTAGCCCCGGtt < 1:3135492/92‑1 (MQ=255) ccGGAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTCCGGCCCATTAGCCCCGGTTCAggcg < 2:3135509/97‑1 (MQ=255) ggAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTCCGGCCCATTAGCCCCGGTTCAGGCGGCGAcc > 1:3135995/1‑101 (MQ=255) ggAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTCCGGCCCATTAGCCCCGGTTCAGGCGGCGAcc > 2:3135994/1‑101 (MQ=255) ggAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTCCGGCCCATTAGCCCCGGTTCAGGCGGCGAcc < 1:3135568/101‑1 (MQ=255) gAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTCCGGCCCATTAGCCCCGGTTCAggcgg > 2:3135997/1‑95 (MQ=255) gAGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTCCGGCCCATTAGCCCCGGTTCAGGCGGCGAccg < 2:3135489/101‑1 (MQ=255) aGTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTCCGGCCCATTAGCCCCGGTTCAGGCGGCGAccgc < 1:3135947/101‑1 (MQ=255) gTGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTCCGGCCCATTAGCCCCGGTTCAGGCGGCGAccgcc > 1:3136001/1‑101 (MQ=255) tGCAGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTCCGGCCCATTAGCCCCGGTTCAGGCGGCGAccgcc > 2:3136003/1‑100 (MQ=255) aGCTCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTCCGGCCCATTAGCCCCGGTTCAGGCGGCGACCGCCGTAg > 2:3136005/1‑101 (MQ=255) | AGTTATAAATCCCGTTGGGTAATCGTAATCGTGGTGGTTATCGCCGCCATCGCCGCATTCTGGTTCTGGCAAGGCCGCAATGACTCCCGGAGTGCAGCCCCAGGGGCGACGAAACAAGCGCAGCAATCGCCAGCGGGTGGTCGACGTGGTATGCGTTCCGGCCCATTAGCCCCGGTTCAGGCGGCGACCGCCGTAG > NC_000913/2154025‑2154220 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |