BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,562,867	T→C	V115A (GTG→GCG)	yffP →	CPZ‑55 prophage; uncharacterized protein YffP

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,562,867	0	T	C	100.0%	1049.2 / NA	250	V115A (GTG→GCG)	yffP	CPZ‑55 prophage; uncharacterized protein YffP
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (126/124); total (126/124)

Only 100 of 252 total aligned reads displayed.

GCCGGTGCATCCAGAATATGCGAAGCACTGGAACATGAAAGGCGTCATGAATGACAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGTGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAAC  >  NC_000913/2562769‑2562964

 ccGGTGCATCCAGAATATGCGAAGCACTGGAACATGAAAGGCGTCATGAATGACAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCt                                                                                                <  1:3729806/101‑1 (MQ=255)

 ccGGTGCATCCAGAATATGCGAAGCACTGGAACATGAAAGGCGTCATGAATGACAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCt                                                                                                <  1:3729963/101‑1 (MQ=255)

  cGGTGCATCCAGAATATGCGAAGCACTGGAACATGAAAGGCGTCATGAATGACAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCtt                                                                                               <  1:3729912/101‑1 (MQ=255)

  cGGTGCATCCAGAATATGCGAAGCACTGGAACATGAAAGGCGTCATGAATGACAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCtt                                                                                               >  2:3730317/1‑101 (MQ=255)

     tGCATCCAGAATATGCGAAGCACTGGAACATGAAAGGCGTCATGAATGACAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGcc                                                                                            >  2:3730320/1‑101 (MQ=255)

      gCATCCAGAATATGCGAAGCACTGGAACATGAAAGGCGTCATGAATGACAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCt                                                                                           <  1:3730001/101‑1 (MQ=255)

         tCCAGAATATGCGAAGCACTGGAACATGAAAGGCGTCATGAATGACAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTggg                                                                                        >  2:3730323/1‑101 (MQ=255)

          ccAGAATATGCGAAGCACTGGAACATGAAAGGCGTCATGAATGACAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGt                                                                                       <  1:3729679/101‑1 (MQ=255)

            aGAATATGCGAAGCACTGGAACATGAAAGGCGTCATGAATGACAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGa                                                                                     >  1:3730324/1‑101 (MQ=255)

            aGAATATGCGAAGCACTGGAACATGAAAGGCGTCATGAATGACAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGa                                                                                     <  1:3729888/101‑1 (MQ=255)

              aaTATGCGAAGCACTGGAACATGAAAGGCGTCATGAATGACAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGc                                                                                   <  1:3729897/101‑1 (MQ=255)

                tatGCGAAGCACTGGAACATGAAAGGCGTCATGAATGACAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCtt                                                                                 >  1:3730326/1‑101 (MQ=255)

                tatGCGAAGCACTGGAACATGAAAGGCGTCATGAATGACAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCtt                                                                                 <  1:3730118/101‑1 (MQ=255)

                  tGCGAAGCACTGGAACATGAAAGGCGTCATGAATGACAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTAt                                                                               <  1:3729928/101‑1 (MQ=255)

                   gCGAAGCACTGGAACATGAAAGGCGTCATGAATGACAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATc                                                                              <  2:3729988/101‑1 (MQ=255)

                    cGAAGCACTGGAACATGAAAGGCGTCATGAATGACAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCg                                                                             <  2:3730002/101‑1 (MQ=255)

                     gAAGCACTGGAACATGAAAGGCGTCATGAATGACAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGc                                                                            <  2:3729859/101‑1 (MQ=255)

                     gAAGCACTGGAACATGAAAGGCGTCATGAATGACAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGc                                                                            >  1:3730333/1‑101 (MQ=255)

                      aaGCACTGGAACATGAAAGGCGTCATGAATGACAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGca                                                                           >  2:3730335/1‑101 (MQ=255)

                      aaGCACTGGAACATGAAAGGCGTCATGAATGACAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGca                                                                           >  1:3730336/1‑101 (MQ=255)

                        gCACTGGAACATGAAAGGCGTCATGAATGACAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGcaca                                                                         >  2:3730339/1‑101 (MQ=255)

                         cACTGGAACATGAAAGGCGTCATGAATGACAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACaa                                                                        <  2:3730039/101‑1 (MQ=255)

                         cACTGGAACATGAAAGGCGTCATGAATGACAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACaa                                                                        >  1:3730341/1‑101 (MQ=255)

                          aCTGGAACATGAAAGGCGTCATGAATGACAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACaaa                                                                       <  2:3729812/101‑1 (MQ=255)

                          aCTGGAACATGAAAGGCGTCATGAATGACAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACaaa                                                                       >  1:3730343/1‑101 (MQ=255)

                             ggAACATGAAAGGCGTCATGAATGACAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGac                                                                    >  1:3730346/1‑101 (MQ=255)

                              gAACATGAAAGGCGTCATGAATGACAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGaca                                                                   >  1:3730349/1‑101 (MQ=255)

                                aCATGAAAGGCGTCATGAATGACAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACAcc                                                                 <  1:3730038/101‑1 (MQ=255)

                                  aTGAAAGGCGTCATGAATGACAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCtt                                                               <  2:3729789/101‑1 (MQ=255)

                                  aTGAAAGGCGTCATGAATGACAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCtt                                                               <  2:3729820/101‑1 (MQ=255)

                                  aTGAAAGGCGTCATGAATGACAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCtt                                                               >  1:3730353/1‑101 (MQ=255)

                                   tGAAAGGCGTCATGAATGACAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTc                                                              >  2:3730354/1‑101 (MQ=255)

                                     aaaGGCGTCATGAATGACAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCAc                                                            <  1:3730076/101‑1 (MQ=255)

                                     aaaGGCGTCATGAATGACAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCAc                                                            >  2:3730356/1‑101 (MQ=255)

                                       aGGCGTCATGAATGACAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACgg                                                          <  1:3729919/101‑1 (MQ=255)

                                       aGGCGTCATGAATGACAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACgg                                                          >  1:3730360/1‑101 (MQ=255)

                                          cGTCATGAATGACAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTg                                                       <  2:3729971/101‑1 (MQ=255)

                                           gTCATGAATGACAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGc                                                      >  1:3730363/1‑101 (MQ=255)

                                           gTCATGAATGACAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGc                                                      >  2:3730364/1‑101 (MQ=255)

                                            tCATGAATGACAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCg                                                     >  1:3730367/1‑101 (MQ=255)

                                              atgaatgaCAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGaa                                                   >  1:3730371/1‑101 (MQ=255)

                                              atgaatgaCAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGaa                                                   >  2:3730369/1‑101 (MQ=255)

                                                gaatgaCAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAAc                                                 >  1:3730375/1‑101 (MQ=255)

                                                 aatgaCAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACg                                                >  2:3730377/1‑101 (MQ=255)

                                                  atgaCAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACgg                                               >  1:3730381/1‑101 (MQ=255)

                                                  atgaCAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACgg                                               <  1:3729819/101‑1 (MQ=255)

                                                   tgaCAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGt                                              >  1:3730383/1‑101 (MQ=255)

                                                    gaCAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGtt                                             <  1:3730229/101‑1 (MQ=255)

                                                    gaCAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGtt                                             <  1:3729976/101‑1 (MQ=255)

                                                     aCAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACgg                                               <  2:3729910/98‑1 (MQ=255)

                                                       aaaaCCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCa                                          >  2:3730385/1‑101 (MQ=255)

                                                        aaaCCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCaa                                         >  1:3730388/1‑101 (MQ=255)

                                                         aaCCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAAt                                        >  2:3730390/1‑101 (MQ=255)

                                                         aaCCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAAt                                        <  2:3730052/101‑1 (MQ=255)

                                                          aCCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATa                                       >  2:3730392/1‑101 (MQ=255)

                                                          aCCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATa                                       <  1:3729948/101‑1 (MQ=255)

                                                             cGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACtt                                    <  2:3730091/101‑1 (MQ=255)

                                                             cGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACtt                                    >  1:3730395/1‑101 (MQ=255)

                                                              gCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTc                                   >  2:3730397/1‑101 (MQ=255)

                                                               cTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTcc                                  <  2:3729920/101‑1 (MQ=255)

                                                               cTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTcc                                  >  1:3730401/1‑101 (MQ=255)

                                                                 tCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCaa                                <  1:3730032/101‑1 (MQ=255)

                                                                 tCCACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCaa                                <  1:3730132/101‑1 (MQ=255)

                                                                  ccACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTc                                   <  2:3730024/97‑1 (MQ=255)

                                                                  ccACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCaaa                               <  2:3729893/101‑1 (MQ=255)

                                                                   cACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAAc                              >  1:3730403/1‑101 (MQ=255)

                                                                   cACGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAAc                              <  2:3729940/101‑1 (MQ=255)

                                                                    aCGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACg                             <  2:3729947/101‑1 (MQ=255)

                                                                     cGCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGa                            <  2:3730102/101‑1 (MQ=255)

                                                                      gCCGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGAt                           >  1:3730406/1‑101 (MQ=255)

                                                                        cGACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGt                         >  1:3730408/1‑101 (MQ=255)

                                                                         gACAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTa                        >  2:3730409/1‑101 (MQ=255)

                                                                           cAAGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACg                      <  1:3730165/101‑1 (MQ=255)

                                                                            aaGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGa                     >  2:3730414/1‑101 (MQ=255)

                                                                            aaGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGa                     <  2:3730163/101‑1 (MQ=255)

                                                                             aGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGAc                    >  1:3730416/1‑101 (MQ=255)

                                                                             aGTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGAc                    >  2:3730417/1‑101 (MQ=255)

                                                                              gTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACa                   <  1:3730154/101‑1 (MQ=255)

                                                                              gTGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACa                   <  1:3730070/101‑1 (MQ=255)

                                                                               tGGGTAGGGTACAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACAt                  >  2:3730420/1‑101 (MQ=255)

                                                                                gggtagggtaCAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATg                 >  1:3730424/1‑101 (MQ=255)

                                                                                gggtagggtaCAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATg                 <  2:3730310/101‑1 (MQ=255)

                                                                                gggtagggtaCAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATg                 <  1:3730011/101‑1 (MQ=255)

                                                                                gggtagggtaCAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATg                 >  2:3730422/1‑101 (MQ=255)

                                                                                  gtagggtaCAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGa               <  1:3729833/101‑1 (MQ=255)

                                                                                   tagggtaCAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGaa              <  2:3729978/101‑1 (MQ=255)

                                                                                   tagggtaCAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGaa              >  2:3730428/1‑101 (MQ=255)

                                                                                    agggtaCAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAAc             >  2:3730431/1‑101 (MQ=255)

                                                                                    agggtaCAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAAc             <  1:3729864/101‑1 (MQ=255)

                                                                                    agggtaCAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAAc             <  1:3729713/101‑1 (MQ=255)

                                                                                     gggtaCAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACg            <  2:3730050/101‑1 (MQ=255)

                                                                                       gtaCAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGc          <  2:3729654/101‑1 (MQ=255)

                                                                                         aCAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCaa        <  2:3729869/101‑1 (MQ=255)

                                                                                          cAGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCaaa       >  2:3730434/1‑101 (MQ=255)

                                                                                           aGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAAt      >  2:3730437/1‑101 (MQ=255)

                                                                                           aGCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAAt      >  1:3730436/1‑101 (MQ=255)

                                                                                            gCAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATc     >  1:3730440/1‑101 (MQ=255)

                                                                                             cAAGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCa    <  2:3729884/101‑1 (MQ=255)

                                                                                              aaGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAAc                              <  2:3729784/74‑1 (MQ=255)

                                                                                              aaGGCGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCaa   >  2:3730443/1‑101 (MQ=255)

GCCGGTGCATCCAGAATATGCGAAGCACTGGAACATGAAAGGCGTCATGAATGACAAAACCCGCTTCCACGCCGACAAGTGGGTAGGGTACAGCAAGGTGCTTGCCTGGGTGAGCTTATCGCACAAAGACACCTTCACGGGTGCGAAACGGTTTCAATACTTCCAAACGATGTACGACATGGAACGGCAAATCAAC  >  NC_000913/2562769‑2562964

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`