BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	368,372	G→A	R17C (CGC→TGC)	mhpR ←	DNA‑binding transcriptional activator MhpR

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	368,372	0	G	A	100.0%	1365.8 / NA	316	R17C (CGC→TGC)	mhpR	DNA‑binding transcriptional activator MhpR
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (155/161); total (155/161)

Only 100 of 321 total aligned reads displayed.

CCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGCAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCGGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCTATAGTTAAAACAACGTGGTGCACCTGGTGCACA  >  NC_000913/368274‑368469

 cgcACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGCAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGt                                                                                                <  2:551302/101‑1 (MQ=255)

    acaGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGCAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTaa                                                                                             <  1:551476/101‑1 (MQ=255)

    acaGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGCAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTaa                                                                                             >  2:551735/1‑101 (MQ=255)

    acaGTGGTGCGATGCAGCCCGCTGAGTTCCGCCAGCAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTaa                                                                                             <  1:551314/101‑1 (MQ=255)

     caGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGCAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAg                                                                                            >  1:551739/1‑101 (MQ=255)

       gtggtgCGATGCAGGCCGCTGAGTTCCGCCAGCAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGcc                                                                                          >  2:551742/1‑101 (MQ=255)

         ggtgCGATGCAGGCCGCTGAGTTCCGCCAGCAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCcgc                                                                                        <  2:551310/101‑1 (MQ=255)

            gCGATGCAGGCCGCTGAGTTCCGCCAGCAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCa                                                                                     >  1:551745/1‑101 (MQ=255)

             cGATGCAGGCCGCTGAGTTCCGCCAGCAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCAc                                                                                    <  1:551260/101‑1 (MQ=255)

              gATGCAGGCCGCTGAGTTCCGCCAGCAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACg                                                                                   >  2:551748/1‑101 (MQ=255)

              gATGCAGGCCGCTGAGTTCCGCCAGCAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACg                                                                                   <  1:551203/101‑1 (MQ=255)

              gATGCAGGCCGCTGAGTTCCGCCAGCAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACg                                                                                   <  2:551131/101‑1 (MQ=255)

                 gCAGGCCGCTGAGTTCCGCCAGCAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGtt                                                                                >  2:551752/1‑101 (MQ=255)

                  cAGGCCGCTGAGTTCCGCCAGCAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGttt                                                                               <  1:551538/101‑1 (MQ=255)

                   aGGCCGCTGAGTTCCGCCAGCAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGtttt                                                                              <  2:551339/101‑1 (MQ=255)

                   aGGCCGCTGAGTTCCGCCAGCAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGtttt                                                                              >  1:551753/1‑101 (MQ=255)

                    ggCCGCTGAGTTCCGCCAGCAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTg                                                                             >  2:551758/1‑101 (MQ=255)

                       cGCTGAGTTCCGCCAGCAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTatat                                                                          <  2:551224/101‑1 (MQ=255)

                        gCTGAGTTCCGCCAGCAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTAtt                                                                         <  2:551489/101‑1 (MQ=255)

                         cTGAGTTCCGCCAGCAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTc                                                                        >  1:551764/1‑101 (MQ=255)

                            aGTTCCGCCAGCAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGt                                                                     <  2:551478/101‑1 (MQ=255)

                             gTTCCGCCAGCAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTc                                                                    >  1:551769/1‑101 (MQ=255)

                              ttCCGCCAGCAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCt                                                                   <  1:551248/101‑1 (MQ=255)

                                 cGCCAGCAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCt                                                                >  2:551771/1‑101 (MQ=255)

                                  gCCAGCAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGccc                                                               <  1:551229/101‑3 (MQ=255)

                                  gCCAGCAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTc                                                               >  2:551774/1‑101 (MQ=255)

                                     agcagcCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCAtt                                                            >  1:551776/1‑101 (MQ=255)

                                      gcagcCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTg                                                           <  1:551296/101‑1 (MQ=255)

                                       cagcCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGt                                                          <  1:551344/101‑1 (MQ=255)

                                        agcCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGtt                                                         <  1:551331/101‑1 (MQ=255)

                                          cccGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCt                                                       <  2:551401/101‑1 (MQ=255)

                                          cccGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCt                                                       <  2:551501/101‑1 (MQ=255)

                                            cGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGc                                                     <  1:551408/101‑1 (MQ=255)

                                              aCGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCat                                                   >  2:551783/1‑101 (MQ=255)

                                              aCGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCat                                                   >  1:551782/1‑101 (MQ=255)

                                                gCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCatat                                                 <  2:551322/101‑1 (MQ=255)

                                                gCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCatat                                                 <  2:551349/101‑1 (MQ=255)

                                                gCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCatat                                                 <  2:551569/101‑1 (MQ=255)

                                                gCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCatat                                                 >  1:551788/1‑101 (MQ=255)

                                                gCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCatat                                                 <  1:551459/101‑1 (MQ=255)

                                                 cTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATAtt                                                >  2:551789/1‑101 (MQ=255)

                                                 cTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATAtt                                                <  1:551388/101‑1 (MQ=255)

                                                  tGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTa                                               <  1:551414/101‑1 (MQ=255)

                                                   ggCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTaa                                              <  2:551673/101‑1 (MQ=255)

                                                   ggCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTaa                                              <  2:551373/101‑1 (MQ=255)

                                                    gCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAAt                                             <  1:551724/101‑1 (MQ=255)

                                                    gCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAAt                                             >  2:551792/1‑101 (MQ=255)

                                                      aCCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTg                                           >  1:551798/1‑101 (MQ=255)

                                                       ccGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGa                                          >  2:551800/1‑101 (MQ=255)

                                                        cGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGAc                                         >  1:551803/1‑101 (MQ=255)

                                                        cGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGAc                                         >  2:551806/1‑101 (MQ=255)

                                                          ccATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTaa                                                                                             <  2:551295/47‑1 (MQ=255)

                                                          ccATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACAt                                       >  2:551811/1‑101 (MQ=255)

                                                           cATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACAtt                                      >  1:551812/1‑101 (MQ=255)

                                                           cATCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACAtt                                      <  1:551357/101‑1 (MQ=255)

                                                            aTCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACAttt                                     >  1:551817/1‑101 (MQ=255)

                                                             tCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTc                                    >  2:551818/1‑101 (MQ=255)

                                                             tCAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTc                                    <  1:551172/101‑1 (MQ=255)

                                                              cAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCt                                   <  2:551255/101‑1 (MQ=255)

                                                              cAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCt                                   <  1:551277/101‑1 (MQ=255)

                                                              cAAGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCt                                   >  2:551822/1‑101 (MQ=255)

                                                               aaGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCta                                  <  2:551286/101‑1 (MQ=255)

                                                               aaGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCta                                  >  2:551826/1‑101 (MQ=255)

                                                                aGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCtat                                 >  2:551830/1‑101 (MQ=255)

                                                                aGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCtat                                 <  2:551539/101‑1 (MQ=255)

                                                                aGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCtat                                 <  1:551155/101‑1 (MQ=255)

                                                                aGTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCtat                                 >  1:551828/1‑101 (MQ=255)

                                                                 gTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTCAt                                             >  2:551836/1‑88 (MQ=255)

                                                                 gTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCtata                                <  2:551445/101‑1 (MQ=255)

                                                                 gTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCtata                                <  2:551581/101‑1 (MQ=255)

                                                                 gTTTATTTAACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCtata                                <  1:551381/101‑1 (MQ=255)

                                                                  tttatttaACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCTATAg                               >  2:551840/1‑101 (MQ=255)

                                                                   ttatttaACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCTATAGt                              >  1:551841/1‑101 (MQ=255)

                                                                    tatttaACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCTATAGtt                             <  2:551194/101‑1 (MQ=255)

                                                                    tatttaACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCTATAGtt                             <  2:551231/101‑1 (MQ=255)

                                                                    tatttaACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCTATAGtt                             >  1:551846/1‑101 (MQ=255)

                                                                      tttaACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCTATAGTTaa                           >  2:551848/1‑101 (MQ=255)

                                                                      tttaACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCTATAGTTaa                           <  1:551320/101‑1 (MQ=255)

                                                                      tttaACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCTATAGTTaa                           <  1:551664/101‑1 (MQ=255)

                                                                      tttaACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCTATAGTTaa                           <  2:551763/101‑1 (MQ=255)

                                                                       ttaACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCTATAGTTaaa                          <  1:551396/101‑1 (MQ=255)

                                                                        taACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCTATAGTTaaaa                         >  1:551851/1‑101 (MQ=255)

                                                                        taACATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCTATAGTTaaaa                         >  2:551853/1‑101 (MQ=255)

                                                                          aCATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCTATAGTTAAaaca                       <  2:551424/101‑1 (MQ=255)

                                                                           cATATTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCTATAGTTAAaacaa                      <  1:551452/101‑1 (MQ=255)

                                                                            atatTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCTATAGTTAAaacaac                     <  2:551552/101‑1 (MQ=255)

                                                                             tatTTAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCTATAGTTAAAACAACg                    >  1:551858/1‑101 (MQ=255)

                                                                               tttAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCTATAGTTAAAACAACgtg                  <  1:551570/101‑1 (MQ=255)

                                                                               tttAATAACATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCTATAGTTAAAACAACgtg                  >  2:551860/1‑101 (MQ=255)

                                                                                 taataaCATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCTATAGTTAAAACAACgtggt                >  1:551865/1‑101 (MQ=255)

                                                                                   ataaCATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCTATAGTTAAAACAACGTGGTGc              >  1:551871/1‑101 (MQ=255)

                                                                                   ataaCATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCTATAGTTAAAACAACGTGGTGc              >  2:551874/1‑101 (MQ=255)

                                                                                   ataaCATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCTATAGTTAAAACAACGTGGTGc              >  2:551869/1‑101 (MQ=255)

                                                                                       cATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCTATAGtt                             >  2:551879/1‑82 (MQ=255)

                                                                                       cATTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCTATAGTTAAAACAACGTGGTGCACCt          >  1:551878/1‑101 (MQ=255)

                                                                                        aTTAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCTATAGTTAAAACAACGTGGTGCACCTg         <  1:551438/101‑1 (MQ=255)

                                                                                         ttAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCTATAGTTAAAACAACGTGGTGCACCTgg        >  1:551882/1‑101 (MQ=255)

                                                                                          tAGACCGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCTATAGTTAAAACAACGTGGTGCACCTGGt       >  1:551885/1‑101 (MQ=255)

                                                                                              ccGCAGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCTATAGTTAAAACAACGTGGTGCACCTGGTGcac   <  2:551409/101‑1 (MQ=255)

                                                                                               cgcaGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCTATAGTTAAAACAACGTGGTGCACCTGGTGcaca  >  2:551890/1‑101 (MQ=255)

CCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGCAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCGGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCATTGTTCTGCATATTAATTGACATTTCTATAGTTAAAACAACGTGGTGCACCTGGTGCACA  >  NC_000913/368274‑368469

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`