BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,267,773	G→T	intergenic (+175/‑81)	tdcR → / → yhaB	DNA‑binding transcriptional activator TdcR/protein YhaB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,267,773	0	G	T	100.0%	1424.4 / NA	331	intergenic (+175/‑81)	tdcR/yhaB	DNA‑binding transcriptional activator TdcR/protein YhaB
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (159/172); total (159/172)

Only 100 of 331 total aligned reads displayed.

TAAGGTCAGACAAAGACAACAAGGGAAATTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAAT  >  NC_000913/3267675‑3267870

tAAGGTCAGACAAAGACAACAAGGGAAATTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCg                                                                                                 <  1:4783726/101‑1 (MQ=255)

tAAGGTCAGACAAAGACAACAAGGGAAATTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCg                                                                                                 <  2:4783855/101‑1 (MQ=255)

  aGGTCAGACAAAGACAACAAGGGAAATTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGtt                                                                                               >  2:4784374/1‑101 (MQ=255)

   ggTCAGACAAAGACAACAAGGGAAATTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGttt                                                                                              <  2:4783783/101‑1 (MQ=255)

      cAGACAAAGACAACAAGGGAAATTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGttttt                                                                                            <  1:4783968/100‑1 (MQ=255)

        gacaaagacaaCAAGGGAAATTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGa                                                                                         >  1:4784380/1‑101 (MQ=255)

          caaagacaaCAAGGGAAATTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATa                                                                                       >  1:4784384/1‑101 (MQ=255)

          caaagacaaCAAGGGAAATTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATa                                                                                       >  2:4784387/1‑101 (MQ=255)

           aaagacaaCAAGGGAAATTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAg                                                                                      <  2:4783905/101‑1 (MQ=255)

            aagacaaCAAGGGAAATTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGt                                                                                     >  1:4784390/1‑101 (MQ=255)

            aagacaaCAAGGGAAATTTTCACAGAGCTTTTGATCGGCGTAGGCCACACAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGt                                                                                     <  1:4783859/101‑1 (MQ=255)

            aagacaaCAAGGGAAATTTTCACAGAGCNTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGt                                                                                     >  2:4784391/1‑101 (MQ=255)

             agacaaCAAGGGAAATTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTg                                                                                    <  1:4783911/101‑1 (MQ=255)

               acaacaAGGGATATTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCg                                                                                  <  1:4783636/101‑1 (MQ=255)

               acaacaAGGGAAATTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCg                                                                                  >  2:4784396/1‑101 (MQ=255)

               acaacaAGGGAAATTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCg                                                                                  <  1:4783501/101‑1 (MQ=255)

                caacaaGGGAAATTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGa                                                                                 >  2:4784401/1‑101 (MQ=255)

                  acaaGGGAAATTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGaaa                                                                               >  1:4784404/1‑101 (MQ=255)

                   caaGGGAAATTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAg                                                                              >  2:4784405/1‑101 (MQ=255)

                    aaGGGAAATTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGa                                                                             >  1:4784409/1‑101 (MQ=255)

                       ggAAATTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAAcc                                                                          >  1:4784414/1‑101 (MQ=255)

                       ggAAATTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAAcc                                                                          >  2:4784415/1‑101 (MQ=255)

                       ggAAATTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAAcc                                                                          <  2:4783805/101‑1 (MQ=255)

                       ggAAATTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAAcc                                                                          <  2:4783929/101‑1 (MQ=255)

                         aaaTTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCt                                                                        <  2:4783293/101‑1 (MQ=255)

                         aaaTTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCt                                                                        <  2:4783952/101‑1 (MQ=255)

                          aaTTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTg                                                                       <  1:4783884/101‑1 (MQ=255)

                          aaTTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTg                                                                       <  1:4783947/101‑1 (MQ=255)

                          aaTTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTg                                                                       >  1:4784423/1‑101 (MQ=255)

                          aaTTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTg                                                                       >  2:4784421/1‑101 (MQ=255)

                              ttCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAg                                                                   <  1:4784054/101‑1 (MQ=255)

                              ttCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAg                                                                   <  1:4784044/101‑1 (MQ=255)

                              ttCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAg                                                                   <  1:4783766/101‑1 (MQ=255)

                               tCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAgg                                                                  <  1:4783799/101‑1 (MQ=255)

                                cacaGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGa                                                                 <  1:4783974/101‑1 (MQ=255)

                                 acaGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGaa                                                                >  2:4784428/1‑101 (MQ=255)

                                 acaGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGaa                                                                <  1:4783877/101‑1 (MQ=255)

                                   agagCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGaaaa                                                              >  1:4784429/1‑101 (MQ=255)

                                   agagCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGaaaa                                                              <  1:4783669/101‑1 (MQ=255)

                                     agCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTGACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATa                                                            <  2:4783733/101‑1 (MQ=255)

                                     agCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATa                                                            <  2:4784193/101‑1 (MQ=255)

                                     agCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATa                                                            >  2:4784433/1‑101 (MQ=255)

                                      gCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATaa                                                           <  2:4784036/101‑1 (MQ=255)

                                      gCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATaa                                                           <  2:4783631/101‑1 (MQ=255)

                                        ttttGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGc                                                         >  1:4784437/1‑101 (MQ=255)

                                          ttGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCAt                                                       <  1:4784008/101‑1 (MQ=255)

                                          ttGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCAt                                                       >  2:4784440/1‑101 (MQ=255)

                                           tGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATc                                                      >  1:4784442/1‑101 (MQ=255)

                                             aTCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCta                                                    >  1:4784448/1‑101 (MQ=255)

                                             aTCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCta                                                    >  2:4784449/1‑101 (MQ=255)

                                             aTCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCta                                                    <  1:4783845/101‑1 (MQ=255)

                                                ggCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCtatta                                                 >  2:4784456/1‑101 (MQ=255)

                                                ggCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCtatta                                                 >  1:4784454/1‑101 (MQ=255)

                                                  cGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTattatt                                               <  1:4784239/101‑1 (MQ=255)

                                                    tAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTAttgt                                             >  2:4784462/1‑101 (MQ=255)

                                                    tAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTAttgt                                             >  1:4784465/1‑101 (MQ=255)

                                                     aGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTAttgtt                                            <  2:4784089/101‑1 (MQ=255)

                                                      ggCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTAttgttt                                           >  2:4784468/1‑101 (MQ=255)

                                                      ggCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTAttgttt                                           <  2:4783886/101‑1 (MQ=255)

                                                         cacaGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTGTTTGTc                                        <  1:4784458/101‑1 (MQ=255)

                                                           caGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTGTTTGTCat                                      >  1:4784474/1‑101 (MQ=255)

                                                           caGAATGTTGCTTCGTTTACTGTAACGCCGGGGAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTGTTTGTCat                                      >  2:4784473/1‑101 (MQ=255)

                                                            aGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTGTTTGTCatg                                     >  1:4784480/1‑101 (MQ=255)

                                                            aGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTGTTTGTCatg                                     >  2:4784479/1‑101 (MQ=255)

                                                              aaTGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTGTTTGTCatgat                                   <  2:4784163/101‑1 (MQ=255)

                                                               aTGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTGTTTGTCatgatg                                  <  2:4784074/101‑1 (MQ=255)

                                                                tGTTGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTGTTTGTCAtgatga                                 <  1:4784073/101‑1 (MQ=255)

                                                                  ttGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACa                               >  1:4784485/1‑101 (MQ=255)

                                                                   tGCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACaa                              <  2:4783761/101‑1 (MQ=255)

                                                                    gCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAg                                                                                      >  1:4784489/1‑44 (MQ=255)

                                                                    gCTTCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAag                             <  2:4783868/101‑1 (MQ=255)

                                                                      ttCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACa                               >  1:4784493/1‑97 (MQ=255)

                                                                      ttCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAaggc                           <  1:4783953/101‑1 (MQ=255)

                                                                       tCGTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAaggca                          <  2:4783874/101‑1 (MQ=255)

                                                                         gTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAaggcagg                        >  1:4784496/1‑101 (MQ=255)

                                                                         gTTTACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAaggcagg                        >  2:4784497/1‑101 (MQ=255)

                                                                           ttACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAggcaggca                      <  1:4783892/101‑1 (MQ=255)

                                                                            tACTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCAt                     >  2:4784503/1‑101 (MQ=255)

                                                                             aCTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATc                    <  1:4783928/101‑1 (MQ=255)

                                                                              cTGTAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCa                   <  2:4784120/101‑1 (MQ=255)

                                                                                 tAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATg                <  1:4783750/101‑1 (MQ=255)

                                                                                 tAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATg                >  1:4784507/1‑101 (MQ=255)

                                                                                 tAACGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATg                >  2:4784506/1‑101 (MQ=255)

                                                                                   aCGCCGGGTAAATGATCGCTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTAttgtttg                                          >  2:4784513/1‑73 (MQ=255)

                                                                                    cGCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGaaa             <  1:4784128/101‑1 (MQ=255)

                                                                                     gCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAg            >  1:4784515/1‑101 (MQ=255)

                                                                                     gCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAg            <  2:4783914/101‑1 (MQ=255)

                                                                                     gCCGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATAACAAGGCAGGCATCAATGAAAg            <  1:4784031/101‑1 (MQ=255)

                                                                                      ccGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAgg           >  1:4784520/1‑101 (MQ=255)

                                                                                      ccGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAgg           >  2:4784521/1‑101 (MQ=255)

                                                                                       cGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAAt                                                             <  2:4783964/50‑1 (MQ=255)

                                                                                       cGGGTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAAt                 <  2:4783994/94‑1 (MQ=255)

                                                                                        gggTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCt         >  2:4784524/1‑101 (MQ=255)

                                                                                         ggTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCtt        <  2:4783939/101‑1 (MQ=255)

                                                                                         ggTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCtt        <  2:4783702/101‑1 (MQ=255)

                                                                                         ggTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTCTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCtt        <  1:4783829/101‑1 (MQ=255)

                                                                                          gTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTc       <  2:4784058/101‑1 (MQ=255)

                                                                                          gTAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTc       <  2:4783825/101‑1 (MQ=255)

                                                                                           tAAATGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTcc      >  1:4784528/1‑101 (MQ=255)

                                                                                            aaaTGATCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGc          >  1:4784532/1‑96 (MQ=255)

TAAGGTCAGACAAAGACAACAAGGGAAATTTTCACAGAGCTTTTGATCGGCGTAGGCCACAGAATGTTGCTTCGTTTACTGTAACGCCGGGTAAATGAGCGTTTTTTGATAGTGCGAAAGAACCCTGCGAGGAAAATAAGCATCTATTATTGTTTGTCATGATGACAAGGCAGGCATCAATGAAAGGCTTCCCAAT  >  NC_000913/3267675‑3267870

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`