BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,584,362	A→G	intergenic (+53/‑42)	yrhA → / → yrhD	putative uncharacterized protein YrhA/uncharacterized protein YrhD

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,584,362	0	A	G	100.0%	1530.8 / NA	353	intergenic (+53/‑42)	yrhA/yrhD	putative uncharacterized protein YrhA/uncharacterized protein YrhD
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (225/128); total (225/128)

Only 100 of 353 total aligned reads displayed.

TGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTACCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGT  >  NC_000913/3584264‑3584459

  aTTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCcag                                                                                               >  1:5262154/1‑101 (MQ=255)

   tttCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCcagc                                                                                              >  2:5262156/1‑101 (MQ=255)

    ttCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCcagca                                                                                             <  2:5261526/101‑1 (MQ=255)

    ttCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCcagca                                                                                             >  1:5262158/1‑101 (MQ=255)

      ctctTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGa                                                                                           <  2:5261554/101‑1 (MQ=255)

      ctctTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGa                                                                                           >  2:5262162/1‑101 (MQ=255)

       tctTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGaa                                                                                          >  1:5262168/1‑101 (MQ=255)

       tctTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGaa                                                                                          >  2:5262169/1‑101 (MQ=255)

       tctTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGaa                                                                                          <  1:5261637/101‑1 (MQ=255)

        ctTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGaaa                                                                                         <  2:5261591/101‑1 (MQ=255)

         ttCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGaaaa                                                                                        >  2:5262175/1‑101 (MQ=255)

         ttCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGaaaa                                                                                        >  1:5262174/1‑101 (MQ=255)

          tCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAAt                                                                                       <  1:5261424/101‑1 (MQ=255)

            aTTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTc                                                                                     >  2:5262189/1‑101 (MQ=255)

            aTTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTc                                                                                     >  1:5262188/1‑101 (MQ=255)

            aTTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTc                                                                                     >  1:5262185/1‑101 (MQ=255)

              tCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAAt                                                                                       >  2:5262195/1‑97 (MQ=255)

               cTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCtt                                                                                  >  1:5262197/1‑101 (MQ=255)

                ttAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTg                                                                                 >  2:5262200/1‑101 (MQ=255)

                  aaaCGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGtt                                                                               <  1:5261035/101‑1 (MQ=255)

                  aaaCGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGtt                                                                               >  2:5262204/1‑101 (MQ=255)

                   aaCGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTc                                                                              >  1:5262206/1‑101 (MQ=255)

                     cGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGa                                                                            <  2:5261652/101‑1 (MQ=255)

                      gAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGaa                                                                           >  1:5262212/1‑101 (MQ=255)

                       aaaTCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGaaa                                                                          >  2:5262215/1‑101 (MQ=255)

                       aaaTCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGaaa                                                                          <  2:5261766/101‑1 (MQ=255)

                        aaTCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAAt                                                                         <  1:5261522/101‑1 (MQ=255)

                          tCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAAttt                                                                       >  1:5262219/1‑101 (MQ=255)

                           cATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTa                                                                      >  2:5262225/1‑101 (MQ=255)

                           cATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTa                                                                      >  1:5262224/1‑101 (MQ=255)

                              ggACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCa                                                                   <  2:5261543/101‑1 (MQ=255)

                               gACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAg                                                                  >  1:5262230/1‑101 (MQ=255)

                               gACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAg                                                                  >  2:5262231/1‑101 (MQ=255)

                                aCAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAg                                                                     >  1:5262236/1‑97 (MQ=255)

                                  aGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGc                                                               >  1:5262242/1‑101 (MQ=255)

                                  aGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGc                                                               >  2:5262238/1‑101 (MQ=255)

                                     tgttCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAg                                                            >  1:5262247/1‑101 (MQ=255)

                                     tgttCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAg                                                            <  2:5261316/101‑1 (MQ=255)

                                      gttCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGc                                                           <  2:5261422/101‑1 (MQ=255)

                                       ttCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCt                                                          >  1:5262252/1‑101 (MQ=255)

                                       ttCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCt                                                          >  2:5262253/1‑101 (MQ=255)

                                          ataataATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATg                                                       >  1:5262258/1‑101 (MQ=255)

                                          ataataATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATg                                                       >  2:5262259/1‑101 (MQ=255)

                                           taataaTCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATgg                                                      >  1:5262265/1‑101 (MQ=255)

                                           taataaTCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATgg                                                      <  1:5261574/101‑1 (MQ=255)

                                            aataatCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGa                                                     >  2:5262269/1‑101 (MQ=255)

                                             ataatCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGaa                                                    >  2:5262272/1‑101 (MQ=255)

                                             ataatCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGaa                                                    >  1:5262273/1‑101 (MQ=255)

                                              taatCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGaaa                                                   <  1:5261679/101‑1 (MQ=255)

                                                  cAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACt                                               >  2:5262279/1‑101 (MQ=255)

                                                   aaaaGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACtt                                              <  1:5261698/101‑1 (MQ=255)

                                                   aaaaGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACtt                                              <  2:5261474/101‑1 (MQ=255)

                                                    aaaGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTa                                             >  1:5262283/1‑101 (MQ=255)

                                                     aaGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTAc                                            >  2:5262286/1‑101 (MQ=255)

                                                      aGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACa                                           >  1:5262289/1‑101 (MQ=255)

                                                        gAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAAc                                         <  1:5261593/101‑1 (MQ=255)

                                                        gAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAAc                                         <  1:5261561/101‑1 (MQ=255)

                                                         aaaCAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACg                                        >  2:5262294/1‑101 (MQ=255)

                                                         aaaCAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACg                                        >  1:5262293/1‑101 (MQ=255)

                                                           aCAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGa                                      <  2:5261608/101‑1 (MQ=255)

                                                            cAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGaa                                     >  1:5262300/1‑101 (MQ=255)

                                                             aaaaaTCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGc                                                               >  2:5262302/1‑74 (MQ=255)

                                                               aaaTCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTa                                  >  2:5262305/1‑101 (MQ=255)

                                                                aaTCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTac                                 <  1:5261744/101‑1 (MQ=255)

                                                                aaTCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTac                                 <  1:5261477/101‑1 (MQ=255)

                                                                aaTCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTac                                 >  1:5262311/1‑101 (MQ=255)

                                                                 aTCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTaca                                >  2:5262314/1‑101 (MQ=255)

                                                                 aTCATTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTaca                                >  1:5262315/1‑101 (MQ=255)

                                                                    aTTGTAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTc                             <  2:5261642/101‑1 (MQ=255)

                                                                      tGTAAACCATGCCATCTTTTTAGAGGTTGCCAGCAGAAAATTCCTTGTTCGa                                                                            >  2:5262321/1‑52 (MQ=255)

                                                                        tAAACCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTa                         >  1:5262325/1‑101 (MQ=255)

                                                                         aaaCCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTaa                        >  2:5262326/1‑101 (MQ=255)

                                                                          aaCCATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAg                       >  2:5262329/1‑101 (MQ=255)

                                                                            ccATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCt                           >  1:5262335/1‑95 (MQ=255)

                                                                             cATGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTga                    >  2:5262336/1‑101 (MQ=255)

                                                                              aTGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTgag                   >  2:5262340/1‑101 (MQ=255)

                                                                               tGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTgaga                  <  1:5261713/101‑1 (MQ=255)

                                                                               tGCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTgaga                  <  2:5261703/101‑1 (MQ=255)

                                                                                gCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGAt                 <  1:5261169/101‑1 (MQ=255)

                                                                                gCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGAt                 <  1:5261828/101‑1 (MQ=255)

                                                                                gCCATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGAt                 >  1:5262345/1‑101 (MQ=255)

                                                                                 ccATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATg                >  2:5262349/1‑101 (MQ=255)

                                                                                  cATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATgg               <  1:5261601/101‑1 (MQ=255)

                                                                                  cATCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATgg               >  1:5262350/1‑101 (MQ=255)

                                                                                    tCTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGAc             <  2:5262017/101‑1 (MQ=255)

                                                                                     cTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGAcc            >  1:5262356/1‑101 (MQ=255)

                                                                                     cTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGAcc            >  2:5262357/1‑101 (MQ=255)

                                                                                     cTTTTTAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGAcc            <  2:5261839/101‑1 (MQ=255)

                                                                                      tttttAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCg           <  2:5261732/101‑1 (MQ=255)

                                                                                       ttttAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGa          <  1:5261650/101‑1 (MQ=255)

                                                                                        tttAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGaa         <  1:5261914/101‑1 (MQ=255)

                                                                                        tttAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGaa         <  1:5261761/101‑1 (MQ=255)

                                                                                        tttAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGaa         <  1:5261630/101‑1 (MQ=255)

                                                                                        tttAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGaa         <  1:5261350/101‑1 (MQ=255)

                                                                                          tAGAGATTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGa       >  2:5262363/1‑101 (MQ=255)

                                                                                            gagaTTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACa     >  1:5262367/1‑101 (MQ=255)

                                                                                            gagaTTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACa     <  1:5261971/101‑1 (MQ=255)

                                                                                            gagaTTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACa     >  2:5262368/1‑101 (MQ=255)

                                                                                             agaTTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACAt    >  2:5262373/1‑101 (MQ=255)

                                                                                               aTTGCCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGt  >  1:5262378/1‑101 (MQ=255)

TGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATTGTAAACCATGCCATCTTTTTAGAGATTACCAGCAGAAAATTCCTTGTTCGAAATTTAGCAGTGCAAGCTATGGAAAAACTTACAACGGAACTACACTCCTTAAGTGAGATGGACCGAAGACATGT  >  NC_000913/3584264‑3584459

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`