| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,134,942 | (G)5→4 | coding (214/783 nt) | flgG → | flagellar basal‑body rod protein FlgG |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,134,938 | 0 | G | . | 99.2% | 1390.3 / 1.9 | 263 | coding (210/783 nt) | flgG | flagellar basal‑body rod protein FlgG |
| Reads supporting (aligned to +/- strand): ref base G (2/0); new base . (114/147); total (116/147) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.94e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.88e-01 | |||||||||||
Only 100 of 285 total aligned reads displayed.
AGCGCGCGGTGTTTGAAGATCTGCTTTATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCACGGGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTT > NC_000913/1134838‑1135034 | aGCGCGCGGTGTTTGAAGATCTGCTTTATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCACg < 1:1659458/101‑1 (MQ=255) gcgcgcGGTGTTTGAAGATCTGCTTTATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCACgg > 2:1659740/1‑101 (MQ=255) gcgcgcGGTGTTTGAAGATCTGCTTTATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCACgg < 2:1659470/101‑1 (MQ=255) gcgGTGTTTGAAGATCTGCTTTATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCACggggta > 1:1659746/1‑99 (MQ=255) cgGTGTTTGAAGATCTGCTTTATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCACggggtac > 2:1659748/1‑98 (MQ=255) ggTGTTTGAAGATCTGCTTTATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCACggggtacg < 1:1659401/101‑5 (MQ=255) gtTTGAAGATCTGCTTTATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGccc < 2:1659661/101‑1 (MQ=255) gtTTGAAGATCTGCTTTATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGccc > 1:1659753/1‑101 (MQ=255) gtTTGAAGATCTGCTTTATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGccc < 1:1659443/101‑1 (MQ=255) ttGAAGATCTGCTTTATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCgg > 2:1659756/1‑101 (MQ=255) ttGAAGATCTGCTTTATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCgg < 2:1659358/101‑1 (MQ=255) ttGAAGATCTGCTTTATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCgg < 2:1659282/101‑1 (MQ=255) tGAAGATCTGCTTTATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGt < 1:1659377/101‑1 (MQ=255) aaGATCTGCTTTATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCg > 1:1659763/1‑101 (MQ=255) aaGATCTGCTTTATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCg > 1:1659760/1‑101 (MQ=255) aaGATCTGCTTTATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCg > 2:1659761/1‑101 (MQ=255) aGATCTGCTTTATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGc < 2:1659291/101‑1 (MQ=255) aTCTGCTTTATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTCCCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCa < 1:1659140/101‑1 (MQ=255) aTCTGCTTTATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCa > 1:1659769/1‑101 (MQ=255) aTCTGCTTTATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCa > 2:1659766/1‑101 (MQ=255) gCTTTATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGa > 2:1659773/1‑101 (MQ=255) tttATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAAc < 1:1659484/101‑1 (MQ=255) tttATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAAc > 1:1659775/1‑101 (MQ=255) ttATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACg > 1:1659778/1‑101 (MQ=255) ttATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACg < 2:1659319/101‑1 (MQ=255) ttATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACg < 1:1659256/101‑1 (MQ=255) cAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTa > 2:1659782/1‑101 (MQ=255) cAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTa < 1:1659321/101‑1 (MQ=255) cAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTa > 1:1659783/1‑101 (MQ=255) aaCCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACTACCTTACCCTCCGGATTACAAATCGGCACgggg > 1:1659789/1‑73 (MQ=255) aaCCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTaca > 2:1659788/1‑101 (MQ=255) aTTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGc > 2:1659794/1‑101 (MQ=255) aTTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGc > 1:1659796/1‑101 (MQ=255) gCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAgg < 2:1659559/101‑1 (MQ=255) ccAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTCCCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACg < 1:1659333/86‑1 (MQ=255) cAGCCGGGGGCACAGTCTTCCGAACAAACCCCCTTCCCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGa < 1:1659429/101‑1 (MQ=255) cAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGa < 2:1659255/101‑1 (MQ=255) cAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGa > 2:1659800/1‑101 (MQ=255) cAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGa < 1:1659464/101‑1 (MQ=255) aGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGaa > 1:1659802/1‑101 (MQ=255) ccGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAAc < 1:1659574/101‑1 (MQ=255) cGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCACgggg > 2:1659808/1‑59 (MQ=255) cGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAAcc > 2:1659805/1‑101 (MQ=255) ggCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTc < 1:1659420/101‑1 (MQ=255) ggCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTc < 2:1659197/101‑1 (MQ=255) cacaGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGc < 1:1659220/101‑1 (MQ=255) acaGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCa > 2:1659813/1‑101 (MQ=255) acaGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCa < 1:1659265/101‑1 (MQ=255) acaGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCa < 1:1659308/101‑1 (MQ=255) acaGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCa > 1:1659812/1‑101 (MQ=255) acaGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCa < 1:1659496/101‑1 (MQ=255) aGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGa < 2:1659445/101‑1 (MQ=255) gTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGa > 2:1659818/1‑68 (MQ=255) tCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGAcc > 1:1659821/1‑101 (MQ=255) cTTCCGAACAAACCCCCTTGCCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACca < 2:1659528/101‑1 (MQ=255) ttCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACcaa > 1:1659824/1‑101 (MQ=255) ttCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACcaa > 2:1659823/1‑101 (MQ=255) tCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACcaac < 1:1659190/101‑1 (MQ=255) tCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACcaac < 1:1659622/101‑1 (MQ=255) ccGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACcaac < 2:1659433/100‑1 (MQ=255) cGAACAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACGCAGCCAGGGAAACCTGTCGCAGACcaacaa < 2:1659573/101‑1 (MQ=255) aCAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAg > 2:1659829/1‑101 (MQ=255) cAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGc > 1:1659830/1‑101 (MQ=255) cAAACCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGc > 2:1659834/1‑101 (MQ=255) aaaCCACCTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCa > 2:1659836/1‑101 (MQ=255) accaccTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCaaa > 1:1659838/1‑101 (MQ=255) ccaccTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAg < 2:1659234/101‑1 (MQ=255) caccTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGa > 2:1659845/1‑101 (MQ=255) caccTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGa > 1:1659843/1‑101 (MQ=255) accTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGAt < 2:1659174/101‑1 (MQ=255) accTTACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGAt > 1:1659847/1‑101 (MQ=255) tACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTcg < 2:1659330/101‑1 (MQ=255) tACCCTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTcg < 2:1659603/101‑1 (MQ=255) cccTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTcgcg > 1:1659852/1‑101 (MQ=255) cccTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTcg < 2:1659346/99‑1 (MQ=255) ccTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCaa > 1:1659854/1‑90 (MQ=255) ccTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGAt < 2:1659366/94‑1 (MQ=255) ccTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGa < 2:1659456/101‑1 (MQ=255) ccTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGa < 2:1659402/101‑1 (MQ=255) cTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGAt < 2:1659393/101‑1 (MQ=255) cTCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGAt > 2:1659856/1‑101 (MQ=255) tCCGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGAtt < 1:1659357/101‑1 (MQ=255) ccGGATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTa > 2:1659859/1‑101 (MQ=255) ggATTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTaaa > 1:1659861/1‑101 (MQ=255) aTTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCa > 2:1659864/1‑82 (MQ=255) aTTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAagg < 1:1659743/101‑1 (MQ=255) aTTACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAagg < 1:1659390/101‑1 (MQ=255) ttACAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAaggg < 1:1659510/101‑1 (MQ=255) aCAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAagggca < 2:1659098/101‑1 (MQ=255) aCAAATCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAagggca < 1:1659590/101‑1 (MQ=255) aaaTCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAagggcagg > 1:1659869/1‑101 (MQ=255) aaaTCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAagggcagg < 1:1659541/101‑1 (MQ=255) aaTCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAagggcaggg < 2:1659314/101‑1 (MQ=255) aaTCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAagggcaggg > 2:1659870/1‑101 (MQ=255) aTCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAagggcagggc < 1:1659506/101‑1 (MQ=255) tCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCt < 2:1659498/101‑1 (MQ=255) tCGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCt < 2:1659409/101‑1 (MQ=255) cGGCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCtt < 1:1659674/101‑1 (MQ=255) ggCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCttt < 2:1659476/101‑1 (MQ=255) ggCAC‑GGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCttt < 1:1659281/101‑1 (MQ=255) | AGCGCGCGGTGTTTGAAGATCTGCTTTATCAAACCATTCGCCAGCCGGGGGCACAGTCTTCCGAACAAACCACCTTACCCTCCGGATTACAAATCGGCACGGGGGTACGCCCGGTCGCCACTGAACGCTTACACAGCCAGGGAAACCTGTCGCAGACCAACAACAGCAAAGATGTCGCGATTAAAGGGCAGGGCTTT > NC_000913/1134838‑1135034 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |