Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,209,413 (G)5→6 coding (1390/1464 nt) ttdT → L‑tartrate:succinate antiporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,209,4081.G99.6% 1006.9 / ‑3.3 231coding (1385/1464 nt)ttdTL‑tartrate:succinate antiporter
Reads supporting (aligned to +/- strand):  ref base . (0/1);  new base G (108/122);  total (108/123)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 259 total aligned reads displayed.

GCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGCTTACTGTGGATGCCCGTGGTGTTGCTTTAAGTGAGGACGGTGCCG  >  NC_000913/3209308‑3209502
                                                                                                     |                                                                                               
gCGGCAATTGGTCTGGGCAGCATTCTTACACCATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACt                                                                                                  <  1:5070584/101‑1 (MQ=255)
 cGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTg                                                                                                <  1:5070837/101‑1 (MQ=255)
   gCAATTGGTCTGGGGAGCATTCTTACACCATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTggg                                                                                             >  2:5071165/1‑101 (MQ=255)
    cAATTGGTCTGGGGAGCATTCTTACACCATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTgggg                                                                                            >  1:5071168/1‑101 (MQ=255)
    cAATTGGTCTGGGGAGCATTCTTACACCATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTgggg                                                                                            >  2:5071167/1‑101 (MQ=255)
      aTTGGTCTGGGGAGCATTCTTACACCATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTgggggg                                                                                          <  2:5070815/101‑2 (MQ=255)
       ttGGTCTGGGGAGCATTCTTACACCATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTggggggc                                                                                         <  1:5070513/101‑3 (MQ=255)
       ttGGTCTGGGGAGCATTCTTACACCATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTggggggc                                                                                         >  1:5071173/1‑99 (MQ=255)
        tGGTCTGGGGAGCATTCTTACACCATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTggggggcg                                                                                        >  2:5071174/1‑98 (MQ=255)
          gTCTGGGGAGCATTCTTACACCATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTggggggcgat                                                                                      <  2:5070697/101‑6 (MQ=255)
           tCTGGGGAGCATTCTTACACCATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGAtt                                                                                      <  2:5070785/101‑1 (MQ=255)
            cTGGGGAGCATTCTTACACCATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGAttt                                                                                     <  2:5070868/101‑1 (MQ=255)
              ggggAGCATTCTTACACCATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGAttttt                                                                                   >  2:5071180/1‑101 (MQ=255)
               gggAGCATTCTTACACCATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTggg                                                                                             >  1:5071183/1‑89 (MQ=255)
                ggAGCATTCTTACACCATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTgg                                                                                 >  1:5071185/1‑101 (MQ=255)
                ggAGCATTCTTACACCATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTgg                                                                                 <  2:5070797/101‑1 (MQ=255)
                 gAGCATTCTTACACCATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTggg                                                                                <  2:5070859/101‑1 (MQ=255)
                 gAGCATTCTTACACCATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTggg                                                                                <  1:5070723/101‑1 (MQ=255)
                     aTTCTTACACCATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGa                                                                            >  2:5071189/1‑101 (MQ=255)
                      ttCTTACACCATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGat                                                                           >  1:5071191/1‑101 (MQ=255)
                        cTTACACCATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGatat                                                                         >  2:5071195/1‑101 (MQ=255)
                        cTTACACCATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGatat                                                                         <  1:5070937/101‑1 (MQ=255)
                         ttACACCATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATAtt                                                                        >  2:5071197/1‑101 (MQ=255)
                           acacCATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTcc                                                                      >  2:5071200/1‑101 (MQ=255)
                            cacCATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCt                                                                     <  2:5070708/101‑1 (MQ=255)
                            cacCATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCt                                                                     <  2:5070847/101‑1 (MQ=255)
                             acCATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTc                                                                    >  1:5071203/1‑101 (MQ=255)
                              ccATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCg                                                                   <  2:5070805/101‑1 (MQ=255)
                               cATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGt                                                                  <  1:5070960/101‑1 (MQ=255)
                               cATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGt                                                                  <  1:5071005/101‑1 (MQ=255)
                               cATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGt                                                                  >  2:5071205/1‑101 (MQ=255)
                               cATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGt                                                                  <  1:5070764/101‑1 (MQ=255)
                                aTACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTa                                                                 <  1:5070942/101‑1 (MQ=255)
                                  aCGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTAtt                                                               >  1:5071209/1‑101 (MQ=255)
                                  aCGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTAtt                                                               >  2:5071208/1‑101 (MQ=255)
                                     ccACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCt                                                            <  2:5070915/101‑1 (MQ=255)
                                     ccACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCt                                                            >  2:5071214/1‑101 (MQ=255)
                                      cACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTg                                                           >  1:5071215/1‑101 (MQ=255)
                                        ccGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTgg                                                                                 <  1:5070678/77‑1 (MQ=255)
                                        ccGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGt                                                         <  1:5070984/101‑1 (MQ=255)
                                         cGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTg                                                        <  1:5070850/101‑1 (MQ=255)
                                         cGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTggggggc                                                                                         <  1:5070751/67‑3 (MQ=255)
                                          ggCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGt                                                         >  1:5071221/1‑99 (MQ=255)
                                          ggCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGa                                                       >  1:5071218/1‑101 (MQ=255)
                                           gCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGAt                                                      >  2:5071223/1‑101 (MQ=255)
                                             cccAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTgt                                                          >  1:5071229/1‑94 (MQ=255)
                                             cccAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTa                                                    >  1:5071227/1‑101 (MQ=255)
                                             cccAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTa                                                    <  2:5070767/101‑1 (MQ=255)
                                              ccAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTAc                                                   <  1:5070874/101‑1 (MQ=255)
                                              ccAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTAc                                                   <  1:5070774/101‑1 (MQ=255)
                                               cAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTAcc                                                  >  2:5071232/1‑101 (MQ=255)
                                                aGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCg                                                 <  2:5070655/101‑1 (MQ=255)
                                                aGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCg                                                 >  2:5071234/1‑101 (MQ=255)
                                                 gTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCgg                                                <  1:5071146/101‑1 (MQ=255)
                                                  tCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGc                                               >  1:5071238/1‑101 (MQ=255)
                                                  tCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGc                                               >  2:5071237/1‑101 (MQ=255)
                                                   ccGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGCt                                              >  1:5071240/1‑101 (MQ=255)
                                                     gATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGCTTa                                            <  1:5070894/101‑1 (MQ=255)
                                                      aTTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGAtt                                                                                      >  2:5071245/1‑58 (MQ=255)
                                                        ttACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGCTTACtg                                         >  2:5071249/1‑101 (MQ=255)
                                                        ttACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGCTTACtg                                         <  1:5070762/101‑1 (MQ=255)
                                                         tactacGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGCTTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGCTTACtgt                                        >  1:5071250/1‑101 (MQ=255)
                                                          actacGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGCTTACtgtg                                       >  2:5071254/1‑101 (MQ=255)
                                                           ctacGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGCTTACTGTgg                                      <  2:5071039/101‑1 (MQ=255)
                                                           ctacGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGCTTACTGTgg                                      <  1:5070796/101‑1 (MQ=255)
                                                           ctacGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGCTTACTGTgg                                      >  1:5071255/1‑101 (MQ=255)
                                                             acGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGt                                                                  >  1:5071259/1‑71 (MQ=255)
                                                             acGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGCTTACTGTGGAt                                    <  1:5070819/101‑1 (MQ=255)
                                                             acGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGCTTACTGTGGAt                                    <  1:5070904/101‑1 (MQ=255)
                                                              cGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGTGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGCTTACTGTGGATg                                   <  2:5070885/101‑1 (MQ=255)
                                                              cGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGCTTACTGTGGATg                                   <  1:5070869/101‑1 (MQ=255)
                                                              cGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGCATTGCTGGTGATTACCGGCTTACTGTGGATg                                   >  2:5071260/1‑101 (MQ=255)
                                                               ggCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGCTTACTGTGGATGc                                  <  2:5070789/101‑1 (MQ=255)
                                                                gCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTg                                                           <  1:5070828/75‑1 (MQ=255)
                                                                  aGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGCTTACTGTGGATGCCCg                               >  2:5071264/1‑101 (MQ=255)
                                                                   gTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGCTTACTGTGGATGCCCgt                              <  1:5070622/101‑1 (MQ=255)
                                                                    tGGTTATCTTCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGCTTACTGTGGATGCCCgtg                             <  2:5070720/101‑1 (MQ=255)
                                                                    tGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGCTTACTGTGGATGCCCgtg                             <  2:5070992/101‑1 (MQ=255)
                                                                      gTTATCTGCCAACGGCGGATTACTGGCGACTGGTGGGCGATTTTTGGGCTGATATGCCTCGTATTGCTGGTGATTACCGGCTTACtg                                         <  1:5070737/87‑1 (MQ=255)
                                                                        tATCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGCTTACTGTGGATGCCCGTGgtgt                         <  2:5071022/101‑1 (MQ=255)
                                                                         aTCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGCTTACTGTGGATGCCCGTGGTGtt                        <  2:5070853/101‑1 (MQ=255)
                                                                         aTCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGCTTACTGTGGATGCCCGTGGTGtt                        <  1:5071090/101‑1 (MQ=255)
                                                                          tCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGCTTACTGTGGATGCCCGTGGTGTTg                       <  2:5070824/101‑1 (MQ=255)
                                                                          tCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGCTTACTGTGGATGCCCGTGGTGTTg                       <  2:5070978/101‑1 (MQ=255)
                                                                          tCTGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGCTTACTGTGGATGCCCGTGGTGTTg                       >  1:5071268/1‑101 (MQ=255)
                                                                            tGCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGCTTACTGTGGATGCCCGTGGTGTTGCt                     >  2:5071270/1‑101 (MQ=255)
                                                                             gCCAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGCTTACTGTGGATGCCCGTGGTGTTGCtt                    >  2:5071272/1‑101 (MQ=255)
                                                                              ccAACGGCGGATTACTGGCGACTGGGGGGCGAttttt                                                                                   >  1:5071273/1‑37 (MQ=255)
                                                                              ccAACGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGCTTACTGTGGATGCCCGTGGTGTTGCttt                   <  1:5071045/101‑1 (MQ=255)
                                                                                aaCGGCGGATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGCTTACTGTGGATGCCCGTGGTGTTGCTTTaa                 <  2:5070891/101‑1 (MQ=255)
                                                                                   ggcggATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGCTTACTGTGGATGCCCGTGGTGTTGCTTTAAGTg              >  1:5071278/1‑101 (MQ=255)
                                                                                   ggcggATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGCTTACTGTGGATGCCCGTGGTGTTGCTTTAAGTg              >  2:5071280/1‑101 (MQ=255)
                                                                                     cggATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGCTTACTGTGGATGCCCGTGGTGTTGCTTTAAGTGAg            <  2:5071107/101‑1 (MQ=255)
                                                                                      ggATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGCTTACTGTGGATGCCCGTGGTGTTGCTTTAAGTGAgg           >  2:5071282/1‑101 (MQ=255)
                                                                                       gATTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGCTTACTGTGGATGCCCGTGGTGTTGCTTTAAGTGAgg           <  2:5070907/100‑1 (MQ=255)
                                                                                        aTTACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGCTTACTGTGGATGCCCGTGGTGTTGCTTTAAGTGAGGAc         <  1:5070807/101‑1 (MQ=255)
                                                                                         ttACTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGCTTACTGTGGATGCCCGTGGTGTTGCTTTAAGTGAGGACg        >  1:5071283/1‑101 (MQ=255)
                                                                                           aCTGGCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGCTTACTGTGGATGCCCGTGGTGTTGCTTTAAGTGAGGACGGt      <  1:5070845/101‑1 (MQ=255)
                                                                                              ggCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGCTTACTGTGGATGCCCGTGGTGTTGCTTTAAGTGAGGACGGTGcc   >  2:5071288/1‑101 (MQ=255)
                                                                                               gCGACTGGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGCTTACTGTGGATGCCCGTGGTGTTGCTTTAAGTGAGGACGGTGCCg  >  1:5071291/1‑101 (MQ=255)
                                                                                                     |                                                                                               
GCGGCAATTGGTCTGGGGAGCATTCTTACACCATACGCCACCGGCCCCAGTCCGATTTACTACGGCAGTGGTTATCTGCCAACGGCGGATTACTGGCGACTGGGGGCGATTTTTGGGCTGATATTCCTCGTATTGCTGGTGATTACCGGCTTACTGTGGATGCCCGTGGTGTTGCTTTAAGTGAGGACGGTGCCG  >  NC_000913/3209308‑3209502

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: