BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,194,966	G→T	intergenic (‑15/‑157)	rluE ← / → icd	23S rRNA pseudouridine(2457) synthase/isocitrate dehydrogenase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,194,966	0	G	T	100.0%	1205.3 / NA	283	intergenic (‑15/‑157)	rluE/icd	23S rRNA pseudouridine(2457) synthase/isocitrate dehydrogenase
Reads supporting (aligned to +/- strand): ref base G (0/0); new base T (138/145); total (138/145)

Only 100 of 287 total aligned reads displayed.

ACGTTGCGAGCTGAATCGCTTAACCTGGTGATTTCTAAAAGAAGTTTTTTGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACGCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGC  >  NC_000913/1194868‑1195063

 cGTTGCGAGCTGAATCGCTTAACCTGGTGATTTCTAAAAGAAGTTTTTTGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACtcgc                                                                                                >  2:1742947/1‑101 (MQ=255)

       gAGCTGAATCGCTTAACCTGGTGATTTCTAAAAGAAGTTTTTTGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCttt                                                                                          >  1:1742949/1‑101 (MQ=255)

         gCTGAATCGCTTAACCTGGTGATTTCTAAAAGAAGTTTTTTGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCa                                                                                        <  2:1742476/101‑1 (MQ=255)

         gCTGAATCGCTTAACCTGGTGATTTCTAAAAGAAGTTTTTTGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCa                                                                                        >  2:1742952/1‑101 (MQ=255)

         gCTGAATCGCTTAACCTGGTGATTTCTAAAAGAAGTTTTTTGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCa                                                                                        <  1:1742619/101‑1 (MQ=255)

          cTGAATCGCTTAACCTGGTGATTTCTAAAAGAAGTTTTTTGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCAt                                                                                       <  1:1742820/101‑1 (MQ=255)

           tGAATCGCTTAACCTGGTGATTTCTAAAAGAAGTTTTTTGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATg                                                                                      <  2:1742587/101‑1 (MQ=255)

           tGAATCGCTTAACCTGGTGATTTCTAAAAGAAGTTTTTTGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATg                                                                                      <  1:1742537/101‑1 (MQ=255)

              aTCGCTTAACCTGGTGATTTCTAAAAGAAGTTTTTTGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACg                                                                                   >  1:1742958/1‑101 (MQ=255)

               tCGCTTAACCTGGTGATTTCTAAAAGAAGTTTTTTGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACgg                                                                                  <  2:1742221/101‑1 (MQ=255)

               tCGCTTAACCTGGTGATTTCTAAAAGAAGTTTTTTGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACgg                                                                                  <  1:1742461/101‑1 (MQ=255)

               tCGCTTAACCTGGTGATTTCTAAAAGAAGTTTTTTGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACgg                                                                                  <  1:1742561/101‑1 (MQ=255)

               tCGCTTAACCTGGTGATTTCTAAAAGAAGTTTTTTGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACgg                                                                                  >  2:1742959/1‑101 (MQ=255)

                  cTTAACCTGGTGATTTCTAAAAGAAGTTTTTTGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCaa                                                                               >  2:1742963/1‑101 (MQ=255)

                  cTTAACCTGGTGATTTCTAAAAGAAGTTTTTTGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCaa                                                                               <  2:1742639/101‑1 (MQ=255)

                   ttAACCTGGTGATTTCTAAAAGAAGTTTTTTGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCaaa                                                                              <  2:1742702/101‑1 (MQ=255)

                    tAACCTGGTGATTTCTAAAAGAAGTTTTTTGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAAc                                                                             >  2:1742967/1‑101 (MQ=255)

                       ccTGGTGATTTCTAAAAGAAGTTTTTTGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAAt                                                                          >  2:1742970/1‑101 (MQ=255)

                          ggTGATTTCTAAAAGAAGTTTTTTGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAgg                                                                       >  1:1742973/1‑101 (MQ=255)

                           gTGATTTCTAAAAGAAGTTTTTTGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAggg                                                                      >  2:1742974/1‑101 (MQ=255)

                           gTGATTTCTAAAAGAAGTTTTTTGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAggg                                                                      >  2:1742976/1‑101 (MQ=255)

                            tGATTTCTAAAAGAAGTTTTTTGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGgt                                                                     <  1:1742501/101‑1 (MQ=255)

                            tGATTTCTAAAAGAAGTTTTTTGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGgt                                                                     >  1:1742980/1‑101 (MQ=255)

                             gATTTCTAAAAGAAGTTTTTTGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGgta                                                                    <  1:1742553/101‑1 (MQ=255)

                               tttCTAAAAGAAGTTTTTTGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGgtagt                                                                  <  1:1742640/101‑1 (MQ=255)

                               tttCTAAAAGAAGTTTTTTGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGgtagt                                                                  >  1:1742984/1‑101 (MQ=255)

                                ttCTAAAAGAAGTTTTTTGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGgtagta                                                                 >  2:1742985/1‑101 (MQ=255)

                                  cTAAAAGAAGTTTTTTGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTAtt                                                               <  1:1742489/101‑1 (MQ=255)

                                  cTAAAAGAAGTTTTTTGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTAtt                                                               >  1:1742987/1‑101 (MQ=255)

                                   tAAAAGAAGTTTTTTGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTg                                                              <  1:1742647/101‑1 (MQ=255)

                                    aaaaGAAGTTTTTTGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTAt                                                                >  2:1742997/1‑98 (MQ=255)

                                    aaaaGAAGTTTTTTGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGa                                                             <  2:1742697/101‑1 (MQ=255)

                                    aaaaGAAGTTTTTTGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGa                                                             >  1:1742993/1‑101 (MQ=255)

                                    aaaaGAAGTTTTTTGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGa                                                             >  2:1742991/1‑101 (MQ=255)

                                     aaaGAAGTTTTTTGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCaa                                                                               >  2:1743000/1‑82 (MQ=255)

                                        gaagTTTTTTGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAg                                                         <  2:1742500/101‑1 (MQ=255)

                                        gaagTTTTTTGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAg                                                         <  1:1742082/101‑1 (MQ=255)

                                        gaagTTTTTTGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAg                                                         >  2:1743003/1‑101 (MQ=255)

                                          agTTTTTTGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGcc                                                       >  1:1743006/1‑101 (MQ=255)

                                          agTTTTTTGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGcc                                                       >  2:1743007/1‑101 (MQ=255)

                                          agTTTTTTGCATGGAATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGgtagt                                                                  >  1:1743010/1‑90 (MQ=255)

                                           gTTTTTTGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCa                                                      <  2:1742848/101‑1 (MQ=255)

                                            ttttttGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCaa                                                     <  2:1742885/101‑1 (MQ=255)

                                              ttttGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAAtt                                                   <  1:1742598/101‑1 (MQ=255)

                                                ttGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTAc                                                 <  1:1742614/101‑1 (MQ=255)

                                                ttGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTAc                                                 >  1:1743013/1‑101 (MQ=255)

                                                  gCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACaa                                               <  1:1742571/101‑1 (MQ=255)

                                                   cATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACaaa                                              <  2:1742673/101‑1 (MQ=255)

                                                   cATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACaaa                                              >  1:1743019/1‑101 (MQ=255)

                                                   cATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACaaa                                              <  2:1742463/101‑1 (MQ=255)

                                                   cATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACaaa                                              >  2:1743018/1‑101 (MQ=255)

                                                    aTGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAAt                                             <  2:1742601/101‑1 (MQ=255)

                                                     tGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAATCCAATTACAAATc                                            >  2:1743023/1‑101 (MQ=255)

                                                      ggTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCa                                           <  2:1742747/101‑1 (MQ=255)

                                                       gTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCAt                                          >  1:1743024/1‑101 (MQ=255)

                                                       gTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCAt                                          <  1:1742698/101‑1 (MQ=255)

                                                        tATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCAtt                                         >  2:1743027/1‑101 (MQ=255)

                                                         aTTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACaa                                                                           >  2:1743030/1‑66 (MQ=255)

                                                         aTTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTa                                        <  2:1742611/101‑1 (MQ=255)

                                                          ttttCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTaa                                       <  2:1742528/101‑1 (MQ=255)

                                                          ttttCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTaa                                       <  2:1742438/101‑1 (MQ=255)

                                                          ttttCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGCAGTATTGACAAGCCAATTACAAATCATTaa                                       >  2:1743035/1‑101 (MQ=255)

                                                           tttCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAAc                                      <  2:1742656/101‑1 (MQ=255)

                                                           tttCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAAc                                      <  1:1742879/101‑1 (MQ=255)

                                                           tttCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAAc                                      <  1:1742510/101‑1 (MQ=255)

                                                           tttCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAAc                                      >  2:1743038/1‑101 (MQ=255)

                                                           tttCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAAc                                      <  2:1742516/101‑1 (MQ=255)

                                                           tttCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAAc                                      <  2:1742509/101‑1 (MQ=255)

                                                           tttCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAAc                                      <  1:1742630/101‑1 (MQ=255)

                                                            ttCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACa                                     >  2:1743041/1‑101 (MQ=255)

                                                             tCAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACaa                                    >  2:1743044/1‑101 (MQ=255)

                                                              cAGAGATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACaaa                                   >  1:1743046/1‑101 (MQ=255)

                                                               agagATTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACaaaa                                  >  1:1743049/1‑101 (MQ=255)

                                                                gagaTTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACaaaaa                                 >  2:1743050/1‑101 (MQ=255)

                                                                 agaTTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACaaaaaa                                <  1:1742590/101‑1 (MQ=255)

                                                                  gaTTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAAt                               >  2:1743052/1‑101 (MQ=255)

                                                                   aTTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAAtt                              <  1:1742655/101‑1 (MQ=255)

                                                                   aTTATGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAAtt                              <  1:1742756/101‑1 (MQ=255)

                                                                      aTGAATTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGct                           >  1:1743056/1‑101 (MQ=255)

                                                                         aaTTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTa                        <  2:1742736/101‑1 (MQ=255)

                                                                         aaTTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTa                        >  2:1743060/1‑101 (MQ=255)

                                                                          aTTGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTaa                       <  2:1742716/101‑1 (MQ=255)

                                                                           ttGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTaaa                      <  1:1742731/101‑1 (MQ=255)

                                                                            tGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAg                     <  1:1742555/101‑1 (MQ=255)

                                                                            tGCCGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAg                     >  1:1743062/1‑101 (MQ=255)

                                                                              ccGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCa                   >  2:1743065/1‑101 (MQ=255)

                                                                              ccGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCa                   <  2:1742562/101‑1 (MQ=255)

                                                                               cGCATTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCAt                  <  1:1742423/101‑1 (MQ=255)

                                                                                  aTTATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCg               >  2:1743069/1‑101 (MQ=255)

                                                                                   ttATAGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGt              <  2:1742792/101‑1 (MQ=255)

                                                                                   ttATAGCCTAATAACTCGCATCTTTCATAACGGCAAACAATAGGgtag                                                                   >  2:1743072/1‑48 (MQ=255)

                                                                                     ataGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTAt            <  2:1742678/101‑1 (MQ=255)

                                                                                      taGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATc           <  1:1742788/101‑1 (MQ=255)

                                                                                       aGCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCg          <  1:1742714/101‑1 (MQ=255)

                                                                                        gCCTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGc         >  1:1743074/1‑101 (MQ=255)

                                                                                          cTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAg       <  2:1742625/101‑1 (MQ=255)

                                                                                          cTAATAACTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAg       >  2:1743077/1‑101 (MQ=255)

                                                                                              taaCTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACg   <  2:1742760/101‑1 (MQ=255)

                                                                                              taaCTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACg   >  2:1743080/1‑101 (MQ=255)

                                                                                               aaCTCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGc  >  1:1743083/1‑101 (MQ=255)

ACGTTGCGAGCTGAATCGCTTAACCTGGTGATTTCTAAAAGAAGTTTTTTGCATGGTATTTTCAGAGATTATGAATTGCCGCATTATAGCCTAATAACGCGCATCTTTCATGACGGCAAACAATAGGGTAGTATTGACAAGCCAATTACAAATCATTAACAAAAAATTGCTCTAAAGCATCCGTATCGCAGGACGC  >  NC_000913/1194868‑1195063

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`