BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,335,476	A→G	intergenic (+18/‑96)	yciX → / → ymiC	uncharacterized protein YciX/protein YmiC

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,335,476	0	A	G	100.0%	1301.1 / NA	297	intergenic (+18/‑96)	yciX/ymiC	uncharacterized protein YciX/protein YmiC
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (144/153); total (144/153)

Only 100 of 305 total aligned reads displayed.

ATTCCAGACGACTGGCAACTAACATCGCAGCAGCAAGCCTTTATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTACCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAGTTATCTCAACACAAAATAATAACCGTTAAGGGTGTAGCCTAT  >  NC_000913/1335378‑1335573

aTTCCAGACGACTGGCAACTAACATCGCAGCAGCAAGCCTTTATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGcc                                                                                                 <  1:1943105/101‑1 (MQ=255)

 ttCCAGACGACTGGCAACTAACATCGCAGCAGCAAGCCTTTATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGccc                                                                                                >  1:1943433/1‑101 (MQ=255)

 ttCCAGACGACTGGCAACTAACATCGCAGCAGCAAGCCTTTATAGAACTGTTTCCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGccc                                                                                                <  1:1943165/101‑1 (MQ=255)

  tCCAGACGACTGGCAACTAACATCGCAGCAGCAAGCCTTTATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCa                                                                                               <  1:1942558/101‑1 (MQ=255)

  tCCAGACGACTGGCAACTAACATCGCAGCAGCAAGCCTTTATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCa                                                                                               >  2:1943434/1‑101 (MQ=255)

   ccAGACGACTGGCAACTAACATCGCAGCAGCAAGCCTTTATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCAt                                                                                              <  2:1943076/101‑1 (MQ=255)

    cAGACGACTGGCAACTAACATCGCAGCAGCAAGCCTTTATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCAtt                                                                                             <  2:1943162/101‑1 (MQ=255)

     aGACGACTGGCAACTAACATCGCAGCAGCAAGCCTTTATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCAttt                                                                                            >  1:1943439/1‑101 (MQ=255)

      gacgacTGGCAACTAACATCGCAGCAGCAAGCCTTTATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCAtttt                                                                                           <  1:1943040/101‑1 (MQ=255)

      gacgacTGGCAACTAACATCGCAGCAGCAAGCCTTTATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCAtttt                                                                                           >  1:1943442/1‑101 (MQ=255)

       acgacTGGCAACTAACATCGCAGCAGCAAGCCTTTATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCAttttt                                                                                          >  2:1943444/1‑101 (MQ=255)

        cgacTGGCAACTAACATCGCAGCAGCAAGCCTTTATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTa                                                                                         <  2:1943121/101‑1 (MQ=255)

        cgacTGGCAACTAACATCGCAGCAGCAAGCCTTTATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTa                                                                                         <  1:1943081/101‑1 (MQ=255)

         gacTGGCAACTAACATCGCAGCAGCAAGCCTTTATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTaa                                                                                        <  2:1942769/101‑1 (MQ=255)

          acTGGCAACTAACATCGCAGCAGCAAGCCTTTATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAAt                                                                                       >  1:1943449/1‑101 (MQ=255)

            tGGCAACTAACATCGCAGCAGCAAGCCTTTATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGa                                                                                     >  2:1943451/1‑101 (MQ=255)

              gCAACTAACATCGCAGCAGCAAGCCTTTATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAAt                                                                                   <  1:1943138/101‑1 (MQ=255)

               cAACTAACATCGCAGCAGCAAGCCTTTATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAAtt                                                                                  <  2:1943150/101‑1 (MQ=255)

               cAACTAACATCGCAGCAGCAAGCCTTTATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAAtt                                                                                  <  2:1943098/101‑1 (MQ=255)

               cAACTAACATCGCAGCAGCAAGCCTTTATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAAtt                                                                                  <  2:1943064/101‑1 (MQ=255)

                aaCTAACATCGCAGCAGCAAGCCTTTATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTa                                                                                 >  1:1943456/1‑101 (MQ=255)

                  cTAACATCGCAGCAGCAAGCCTTTATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTaaa                                                                               <  2:1943145/101‑1 (MQ=255)

                  cTAACATCGCAGCAGCAAGCCTTTATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTaaa                                                                               <  2:1943009/101‑1 (MQ=255)

                  cTAACATCGCAGCAGCAAGCCTTTATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTaaa                                                                               >  2:1943457/1‑101 (MQ=255)

                      cATCGCAGCAGCAAGCCTTTATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGc                                                                           <  2:1943038/101‑1 (MQ=255)

                       aTCGCAGCAGCAAGCCTTTATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCt                                                                          >  2:1943462/1‑101 (MQ=255)

                       aTCGCAGCAGCAAGCCTTTATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCt                                                                          <  2:1943327/101‑1 (MQ=255)

                         cGCAGCAGCAAGCCTTTATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCttt                                                                        >  1:1943465/1‑101 (MQ=255)

                          gcagcagcaAGCCTTTATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCtttt                                                                       <  1:1942861/101‑1 (MQ=255)

                           cagcagcaAGCCTTTATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTa                                                                      >  1:1943469/1‑101 (MQ=255)

                            agcagcaAGCCTTTATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTaa                                                                     <  2:1942997/101‑1 (MQ=255)

                            agcagcaAGCCTTTATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTaa                                                                     <  1:1943097/101‑1 (MQ=255)

                            agcagcaAGCCTTTATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTaa                                                                     <  1:1943143/101‑1 (MQ=255)

                             gcagcaAGCCTTTATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAAt                                                                    <  1:1942989/101‑1 (MQ=255)

                             gcagcaAGCCTTTATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAAt                                                                    >  2:1943471/1‑101 (MQ=255)

                               agcaAGCCTTTATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATac                                                                  >  1:1943473/1‑101 (MQ=255)

                                 caAGCCTTTATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATacac                                                                >  1:1943478/1‑101 (MQ=255)

                                     ccTTTATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCgca                                                            >  2:1943481/1‑101 (MQ=255)

                                     ccTTTATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCgca                                                            <  2:1942981/101‑1 (MQ=255)

                                     ccTTTATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCgca                                                            >  2:1943485/1‑101 (MQ=255)

                                     ccTTTATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCgca                                                            >  1:1943483/1‑101 (MQ=255)

                                      cTTTATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCgcag                                                           <  2:1943024/101‑1 (MQ=255)

                                       tttATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCgcagc                                                          <  2:1943108/101‑1 (MQ=255)

                                       tttATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCgcagc                                                          <  2:1942920/101‑1 (MQ=255)

                                         tataGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCaa                                                        >  1:1943490/1‑101 (MQ=255)

                                          ataGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAAt                                                       >  2:1943491/1‑101 (MQ=255)

                                            aGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATaa                                                     <  2:1943285/101‑1 (MQ=255)

                                             gAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAAc                                                    >  1:1943495/1‑101 (MQ=255)

                                                cTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGc                                                 >  2:1943499/1‑101 (MQ=255)

                                                cTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGc                                                 >  1:1943500/1‑101 (MQ=255)

                                                  gTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCtt                                               <  1:1943211/101‑1 (MQ=255)

                                                  gTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCtt                                               <  2:1943130/101‑1 (MQ=255)

                                                   tttGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTg                                              >  2:1943503/1‑101 (MQ=255)

                                                    ttGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGa                                             <  1:1942890/101‑1 (MQ=255)

                                                     tGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACCCCGCAGCAATAACAGCTTGAg                                            <  1:1943251/101‑1 (MQ=255)

                                                     tGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAg                                            >  2:1943506/1‑101 (MQ=255)

                                                       cTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAGtt                                          <  2:1943189/101‑1 (MQ=255)

                                                        tGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAGTTa                                         >  2:1943511/1‑101 (MQ=255)

                                                         gAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAGTTAt                                        >  1:1943512/1‑101 (MQ=255)

                                                           aGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAGTTAtct                                      >  2:1943515/1‑101 (MQ=255)

                                                           aGATGATCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAGTTAtct                                      <  1:1942817/101‑1 (MQ=255)

                                                             atgatCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAGTTATCTCa                                    >  2:1943520/1‑101 (MQ=255)

                                                              tgatCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAGTTATCTCaa                                   <  1:1943023/101‑1 (MQ=255)

                                                              tgatCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAGTTATCTCaa                                   <  1:1943335/101‑1 (MQ=255)

                                                              tgatCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAGTTATCTCaa                                   >  1:1943521/1‑101 (MQ=255)

                                                                atCAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAGTTATCTCAaca                                 >  1:1943525/1‑101 (MQ=255)

                                                                  cAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAGTTATCTCAAcaca                               <  2:1942964/101‑1 (MQ=255)

                                                                  cAGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAGTTATCTCAAcaca                               >  2:1943529/1‑101 (MQ=255)

                                                                   aGCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAGTTATCTCAACACaa                              >  1:1943532/1‑101 (MQ=255)

                                                                    gCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAGTTATCTCAACACaaa                             >  1:1943535/1‑101 (MQ=255)

                                                                    gCCGAAACAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAGTTATCTCAACACaaa                             <  2:1942932/101‑1 (MQ=255)

                                                                        aaaCAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAGTTATCTCAACACAAaataa                         >  1:1943539/1‑101 (MQ=255)

                                                                         aaCAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAGTTATCTCAACACAAaataat                        <  2:1942893/101‑1 (MQ=255)

                                                                         aaCAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAGTTATCTCAACACAAaataat                        >  2:1943542/1‑101 (MQ=255)

                                                                          aCAATAATTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAGTTATCTCAACACAAAataata                       <  1:1943049/101‑1 (MQ=255)

                                                                            aataatTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAGTTATCTCAACACAAAATAATAAc                     >  1:1943545/1‑101 (MQ=255)

                                                                            aataatTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAGTTATCTCAACACAAAATAATAAc                     >  2:1943546/1‑101 (MQ=255)

                                                                             ataatTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAGTTATCTCAACACAAAATAATAAcc                    <  1:1942946/101‑1 (MQ=255)

                                                                             ataatTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAGTTATCTCAACACAAAATAATAAcc                    <  1:1943113/101‑1 (MQ=255)

                                                                             ataatTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAGTTATCTCAACACAAAATAATAAcc                    <  1:1943128/101‑1 (MQ=255)

                                                                               aatTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAGTTATCTCAACACAAAATAATAACCGt                  >  2:1943550/1‑101 (MQ=255)

                                                                               aatTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAGTTATCTCAACACAAAATAATAACCGt                  <  1:1943005/101‑1 (MQ=255)

                                                                                atTATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACTGCAGCAATAACAGCTTGAGTTATCTCAACACAAAATAATAACCGtt                 <  2:1943229/101‑1 (MQ=255)

                                                                                 ttATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAGTTATCTCAACACAAAATAATAACCGTTa                <  2:1943054/101‑1 (MQ=255)

                                                                                 ttATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAGTTATCTCAACACAAAATAATAACCGTTa                <  2:1943171/101‑1 (MQ=255)

                                                                                 ttATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAGTTATCTCAACACAAAATAATAACCGTTa                >  2:1943553/1‑101 (MQ=255)

                                                                                  tATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAGTTATCTCAACACAAAATAATAACCGTTaa               <  2:1943238/101‑1 (MQ=255)

                                                                                  tATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAGTTATCTCAACACAAAATAATAACCGTTaa               <  2:1943212/101‑1 (MQ=255)

                                                                                  tATCATCATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAGTTATCTCAACACAAAATAATAACCGTTaa               >  1:1943555/1‑101 (MQ=255)

                                                                                   atcatcATTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAGTTATCTCAACACAAAATAATAACCGTTAAg              >  1:1943558/1‑101 (MQ=255)

                                                                                      atcatTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAGTTATCTCAACACAAAATAATAACCGTTAAGGgt           <  1:1943179/101‑1 (MQ=255)

                                                                                       tcatTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAGTTATCTCAACACAAAATAATAACCGTTAAggg            >  2:1943563/1‑99 (MQ=255)

                                                                                       tcatTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAGTTATCTCAACACAAAATAATAACCGTTAAGGgtg          <  1:1942965/101‑1 (MQ=255)

                                                                                        catTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAGTTATCTCAACACAAAATAATAACCGTTAAGGgtgt         >  1:1943565/1‑101 (MQ=255)

                                                                                         atTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAGTTATCTCAACACAAAATAATAACCGTTAAGGGTGTa        >  1:1943568/1‑101 (MQ=255)

                                                                                         atTCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAGTTATCTCAACACAAAATAATAACCGTTAAGGGTGTa        >  2:1943570/1‑101 (MQ=255)

                                                                                           tCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAGTTATCTCAACACAAAATAATAACCGTTAAGGGTGTAGc      >  1:1943573/1‑101 (MQ=255)

                                                                                           tCTTATTGCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAGTTATCTCAACACAAAATAATAACCGTTAAGGGTGTAGc      >  2:1943576/1‑101 (MQ=255)

                                                                                             ttattgCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAGTTATCTCAACACAAAATAATAACCGTTAAGGGTGTAGCCt    <  1:1943304/101‑1 (MQ=255)

                                                                                               attgCCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAGTTATCTCAACACAAAATAATAACCGTTAAGGGTGTAGCCTAt  >  1:1943581/1‑101 (MQ=255)

ATTCCAGACGACTGGCAACTAACATCGCAGCAGCAAGCCTTTATAGAACTGTTTGCTGAAGATGATCAGCCGAAACAATAATTATCATCATTCTTATTACCCATTTTTAATGAATTAAAGGGCTTTTAATACACCGCAGCAATAACAGCTTGAGTTATCTCAACACAAAATAATAACCGTTAAGGGTGTAGCCTAT  >  NC_000913/1335378‑1335573

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`