BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,604,255	G→A	G70D (GGC→GAC)	lsrD →	Autoinducer‑2 ABC transporter membrane subunit LsrD

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,604,255	0	G	A	100.0%	567.4 / NA	143	G70D (GGC→GAC)	lsrD	Autoinducer‑2 ABC transporter membrane subunit LsrD
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (51/92); total (51/92)

Only 100 of 143 total aligned reads displayed.

AGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGGCCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCGGCGCATTGTGCGGGCTG  >  NC_000913/1604158‑1604352

aGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGAcc                                                                                                 >  1:2323236/1‑100 (MQ=255)

aGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACct                                                                                                >  1:2323235/1‑101 (MQ=255)

aGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACct                                                                                                <  1:2322902/101‑1 (MQ=255)

   aCCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTg                                                                                             <  2:2322862/101‑1 (MQ=255)

       gTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGcc                                                                                         >  1:2323244/1‑101 (MQ=255)

        tGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCca                                                                                        <  2:2322858/101‑1 (MQ=255)

        tGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCca                                                                                        >  1:2323245/1‑101 (MQ=255)

          aatttATCTGCATTGGCATTGTCGCCCTACCGCTAGCGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCcatt                                                                                      <  1:2322929/99‑1 (MQ=255)

          aCTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCcatt                                                                                      <  1:2322904/101‑1 (MQ=255)

            tttATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCcattgc                                                                                    <  1:2322903/101‑1 (MQ=255)

             ttATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCcattgca                                                                                   <  1:2322906/101‑1 (MQ=255)

               aTCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCcattgcatt                                                                                 <  2:2322846/101‑1 (MQ=255)

               aTCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCcattgcatt                                                                                 <  2:2322927/101‑1 (MQ=255)

                tCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCcattgcattg                                                                                <  1:2323009/101‑1 (MQ=255)

                  tGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTggg                                                                              <  2:2322921/101‑1 (MQ=255)

                  tGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTggg                                                                              <  1:2322842/101‑1 (MQ=255)

                     attggcattgTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGt                                                                           <  2:2322980/101‑1 (MQ=255)

                       tggcattgTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCcattgcatt                                                                                 <  2:2322585/93‑1 (MQ=255)

                       tggcattgTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGc                                                                             >  1:2323262/1‑97 (MQ=255)

                         gcattgTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTg                                                                       <  1:2323006/101‑1 (MQ=255)

                           attgTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGtt                                                                     <  1:2322879/101‑1 (MQ=255)

                            ttgTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGttt                                                                    <  1:2322970/101‑1 (MQ=255)

                             tgTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTc                                                                   >  1:2323271/1‑101 (MQ=255)

                                cGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCaaa                                                                <  1:2323014/101‑1 (MQ=255)

                                 gCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAg                                                               <  1:2322795/101‑1 (MQ=255)

                                 gCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAg                                                               <  2:2322950/101‑1 (MQ=255)

                                 gCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAg                                                               <  2:2323087/101‑1 (MQ=255)

                                     tACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAgtggt                                                           >  1:2323277/1‑101 (MQ=255)

                                     tACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAgtggt                                                           >  1:2323278/1‑101 (MQ=255)

                                       ccGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGgtgt                                                         <  2:2323000/101‑1 (MQ=255)

                                        cGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGtgtg                                                        >  1:2323280/1‑101 (MQ=255)

                                         gCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGc                                                       <  2:2322957/101‑1 (MQ=255)

                                         gCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGc                                                       <  2:2322923/101‑1 (MQ=255)

                                         gCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGc                                                       <  2:2322900/101‑1 (MQ=255)

                                         gCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGc                                                       <  2:2322896/101‑1 (MQ=255)

                                           tAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACct                                                                                                <  2:2322809/58‑1 (MQ=255)

                                           tAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCg                                                     <  2:2323137/101‑1 (MQ=255)

                                           tAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCg                                                     <  2:2323093/101‑1 (MQ=255)

                                            aaCGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGa                                                    <  2:2322878/101‑1 (MQ=255)

                                             aCGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGAt                                                   <  1:2323115/101‑1 (MQ=255)

                                             aCGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGAt                                                   <  2:2322952/101‑1 (MQ=255)

                                                aTGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGcc                                                <  1:2323074/101‑1 (MQ=255)

                                                 tGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCg                                               <  2:2323052/101‑1 (MQ=255)

                                                    tGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTg                                            <  2:2323079/101‑1 (MQ=255)

                                                     gATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTgg                                           >  1:2323283/1‑101 (MQ=255)

                                                      aTTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGc                                          <  2:2322794/101‑1 (MQ=255)

                                                         gTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGc                                          >  1:2323284/1‑98 (MQ=255)

                                                            aGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACt                                    <  1:2322806/101‑1 (MQ=255)

                                                              tGGCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTcc                                  >  1:2323286/1‑101 (MQ=255)

                                                               ggCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCt                                 <  2:2322824/101‑1 (MQ=255)

                                                               ggCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCt                                 >  1:2323288/1‑101 (MQ=255)

                                                               ggCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCt                                 <  2:2322870/101‑1 (MQ=255)

                                                               ggCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCt                                 >  2:2323287/1‑101 (MQ=255)

                                                                gCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTg                                <  2:2322826/101‑1 (MQ=255)

                                                                gCGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTg                                <  2:2322724/101‑1 (MQ=255)

                                                                 cGGGATCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGa                               >  1:2323290/1‑101 (MQ=255)

                                                                     aTCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCtt                           <  1:2323021/101‑1 (MQ=255)

                                                                      tCGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTa                          <  1:2322916/101‑1 (MQ=255)

                                                                       cGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTAc                         >  2:2323291/1‑101 (MQ=255)

                                                                       cGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTAc                         >  1:2323292/1‑101 (MQ=255)

                                                                       cGATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTAc                         >  1:2323293/1‑101 (MQ=255)

                                                                        gATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACt                        >  2:2323295/1‑101 (MQ=255)

                                                                        gATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACt                        >  1:2323296/1‑101 (MQ=255)

                                                                        gATATTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACt                        <  1:2323146/101‑1 (MQ=255)

                                                                         atatTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTg                       >  1:2323297/1‑101 (MQ=255)

                                                                         atatTTCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTg                       <  2:2322690/101‑1 (MQ=255)

                                                                            tttCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTc                    <  1:2322978/101‑1 (MQ=255)

                                                                            tttCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTc                    >  1:2323299/1‑101 (MQ=255)

                                                                             ttCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCg                   >  1:2323300/1‑101 (MQ=255)

                                                                             ttCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCg                   <  1:2322837/101‑1 (MQ=255)

                                                                             ttCGTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCg                   <  2:2323099/101‑1 (MQ=255)

                                                                                gTTTGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCGgcg                >  1:2323303/1‑101 (MQ=255)

                                                                                  ttGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCGGCGCa              >  2:2323304/1‑101 (MQ=255)

                                                                                   tGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCGGCGCAt             <  1:2323015/101‑1 (MQ=255)

                                                                                   tGGTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCGGCGCAt             <  2:2323051/101‑1 (MQ=255)

                                                                                    ggTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCGGCGCAtt            >  2:2323305/1‑101 (MQ=255)

                                                                                     gTTCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCGGCGCATtg           <  2:2323090/101‑1 (MQ=255)

                                                                                      ttCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCGGCGCATtgt          <  1:2322778/101‑1 (MQ=255)

                                                                                      ttCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCGGCGCATtgt          <  1:2323048/101‑1 (MQ=255)

                                                                                       tCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCGGCGCATtgtg         >  1:2323307/1‑101 (MQ=255)

                                                                                       tCGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCGGCGCATtgtg         <  1:2323063/101‑1 (MQ=255)

                                                                                        cGACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCGGCGCATTGTGc        >  1:2323308/1‑101 (MQ=255)

                                                                                         gACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCGGCGCATTGTGCg       >  2:2323309/1‑101 (MQ=255)

                                                                                         gACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCGGCGCATTGTGCg       <  1:2322855/101‑1 (MQ=255)

                                                                                         gACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCGGCGCATTGTGCg       <  2:2323184/101‑1 (MQ=255)

                                                                                         gACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCGGCGCATTGTGCg       <  2:2323179/101‑1 (MQ=255)

                                                                                         gACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCGGCGCATTGTGCg       >  1:2323311/1‑101 (MQ=255)

                                                                                         gACCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCGGCGCATTGTGCg       <  2:2323156/101‑1 (MQ=255)

                                                                                          aCCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGAcc                             <  2:2322976/78‑1 (MQ=255)

                                                                                          aCCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCGGCGCATTGTGCgg      >  1:2323312/1‑101 (MQ=255)

                                                                                          aCCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCGGCGCATTGTGCgg      >  1:2323315/1‑101 (MQ=255)

                                                                                          aCCATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCGGCGCATTGTGCgg      >  2:2323313/1‑101 (MQ=255)

                                                                                            cATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCGGCGCATTGTGCGGGc    <  1:2322985/101‑1 (MQ=255)

                                                                                            cATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCGGCGCATTGTGCGGGc    >  1:2323317/1‑101 (MQ=255)

                                                                                            cATCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCGGCGCATTGTGCGGGc    <  2:2322994/101‑1 (MQ=255)

                                                                                             aTCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCGGCGCATTGTGCGGGCt   <  1:2322998/101‑1 (MQ=255)

                                                                                             aTCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCGGCGCATTGTGCGGGCt   <  1:2322995/101‑1 (MQ=255)

                                                                                             aTCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCGGCGCATTGTGCGGGCt   <  1:2322910/101‑1 (MQ=255)

                                                                                             aTCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCGGCGCATTGTGCGGGCt   >  2:2323318/1‑101 (MQ=255)

                                                                                              tCGACCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCGGCGCATTGTGCGGGCTg  >  2:2323319/1‑101 (MQ=255)

AGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCGACCATCGGCCTCTGCGCCATTGCATTGGGCGTACTGTTTCAAAGTGGTGTGCCGATGCCGCTGGCGATACTCCTGACCTTACTGCTCGGCGCATTGTGCGGGCTG  >  NC_000913/1604158‑1604352

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`