BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,294,136	T→C	T257A (ACT→GCT)	ccmF ←	holocytochrome c synthetase membrane subunit CcmF

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,294,136	0	T	C	100.0%	996.3 / NA	230	T257A (ACT→GCT)	ccmF	holocytochrome c synthetase membrane subunit CcmF
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (118/112); total (118/112)

Only 100 of 239 total aligned reads displayed.

CAACAGACACAACGAGAAGGCACTGATTGCCAGCAGTAATGTCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGTCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAACCACCAGCCACCCCAGCCGAGTTCGTAATAGGCCCATGCGGAACCGAG  >  NC_000913/2294038‑2294232

cAACAGACACAACGAGAAGGCACTGATTGCCAGCAGTAATGTCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGccc                                                                                                >  1:3728791/1‑101 (MQ=255)

cAACAGACACAACGAGAAGGCACTGATTGCCAGCAGTAATGTCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGccc                                                                                                >  2:3728792/1‑101 (MQ=255)

 aaCAGACACAACGAGAAGGCACTGATTGCCAGCAGTAATGTCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGcccc                                                                                               >  1:3728795/1‑101 (MQ=255)

 aaCAGACACAACGAGAAGGCACTGATTGCCAGCAGTAATGTCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGcccc                                                                                               >  2:3728796/1‑101 (MQ=255)

 aaCAGACACAACGAGAAGGCACTGATTGCCAGCAGTAATGTCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGcccc                                                                                               <  1:3728425/101‑1 (MQ=255)

 aaCAGACACAACGAGAAGGCACTGATTGCCAGCAGTAATGTCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGcccc                                                                                               <  2:3728543/101‑1 (MQ=255)

  aCAGACACAACGAGAAGGCACTGATTGCCAGCAGTAATGTCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCcccc                                                                                              >  2:3728799/1‑101 (MQ=255)

   cAGACACAACGAGAAGGCACTGATTGCCAGCAGTAATGTCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCcca                                                                                             <  2:3728220/101‑1 (MQ=255)

    aGACACAACGAGAAGGCACTGATTGCCAGCAGTAATGTCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCccac                                                                                            >  1:3728802/1‑101 (MQ=255)

    aGACACAACGAGAAGGCACTGATTGCCAGCAGTAATGTCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCccac                                                                                            <  1:3728325/101‑1 (MQ=255)

       cacaACGAGAAGGCACTGATTGCCAGCAGTAATGTCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAg                                                                                         <  1:3728454/101‑1 (MQ=255)

        acaACGAGAAGGCACTGATTGCCAGCAGTAATGTCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGc                                                                                        >  1:3728804/1‑101 (MQ=255)

        acaACGAGAAGGCACTGATTGCCAGCAGTAATGTCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGc                                                                                        <  2:3728514/101‑1 (MQ=255)

           aCGAGAAGGCACTGATTGCCAGCAGTAATGTCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCAc                                                                                     <  2:3728487/101‑1 (MQ=255)

              agaAGGCACTGATTGCCAGCAGTAATGTCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGc                                                                                  >  1:3728810/1‑101 (MQ=255)

              agaAGGCACTGATTGCCAGCAGTAATGTCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGc                                                                                  >  2:3728811/1‑101 (MQ=255)

                aaGGCACTGATTGCCAGCAGTAATGTCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCAt                                                                                >  2:3728815/1‑101 (MQ=255)

                aaGGCACTGATTGCCAGCAGTAATGTCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCAt                                                                                >  1:3728814/1‑101 (MQ=255)

                   gCACTGATTGCCAGCAGTAATGTCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCcccc                                                                                              >  2:3728818/1‑84 (MQ=255)

                     aCTGATTGCCAGCAGTAATGTCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACg                                                                           >  1:3728820/1‑101 (MQ=255)

                       tGATTGCCAGCAGTAATGTCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCccacca                                                                                          >  1:3728824/1‑84 (MQ=255)

                        gATTGCCAGCAGTAATGTCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAgg                                                                        <  1:3728478/101‑1 (MQ=255)

                        gATTGCCAGCAGTAATGTCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAgg                                                                        >  2:3728827/1‑101 (MQ=255)

                        gATTGCCAGCAGTAATGTCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAgg                                                                        >  2:3728825/1‑101 (MQ=255)

                        gATTGCCAGCAGTAATGTCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAgg                                                                        <  2:3728348/101‑1 (MQ=255)

                         aTTGCCAGCAGTAATGTCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGc                                                                       <  1:3728265/101‑1 (MQ=255)

                         aTTGCCAGCAGTAATGTCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACAGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAAc                                                                            >  2:3728831/1‑96 (MQ=255)

                          ttGCCAGCAGTAATGTCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCg                                                                      >  1:3728832/1‑101 (MQ=255)

                           tGCCAGCAGTAATGTCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGt                                                                     <  1:3728401/101‑1 (MQ=255)

                           tGCCAGCAGTAATGTCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGt                                                                     <  2:3728467/101‑1 (MQ=255)

                             ccAGCAGTAATGTCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGttt                                                                   <  2:3728384/101‑1 (MQ=255)

                              cagcagTAATGTCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGa                                                                          >  1:3728837/1‑93 (MQ=255)

                               agcagTAATGTCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTc                                                                 >  2:3728838/1‑101 (MQ=255)

                                gcagTAATGTCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCt                                                                <  2:3728496/101‑1 (MQ=255)

                                gcagTAATGTCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCt                                                                <  1:3728217/101‑1 (MQ=255)

                                 cagTAATGTCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTa                                                               >  1:3728842/1‑101 (MQ=255)

                                 cagTAATGTCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTa                                                               <  1:3728230/101‑1 (MQ=255)

                                 cagTAATGTCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTa                                                               >  2:3728841/1‑101 (MQ=255)

                                  agTAATGTCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTAc                                                              >  2:3728845/1‑101 (MQ=255)

                                    tAATGTCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCg                                                            <  2:3728436/101‑1 (MQ=255)

                                       tGTCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGAt                                                         <  1:3728320/101‑1 (MQ=255)

                                        gTCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATc                                                        <  1:3728456/101‑1 (MQ=255)

                                         tCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATcc                                                       <  1:3728385/101‑1 (MQ=255)

                                         tCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATcc                                                       <  2:3728615/101‑1 (MQ=255)

                                          ccACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATccc                                                      >  1:3728847/1‑101 (MQ=255)

                                            aCGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAg                                                    >  2:3728851/1‑101 (MQ=255)

                                            aCGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAg                                                    >  1:3728853/1‑101 (MQ=255)

                                             cGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGa                                                   >  2:3728856/1‑101 (MQ=255)

                                             cGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGa                                                   >  1:3728855/1‑101 (MQ=255)

                                              gCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGaa                                                  <  1:3728364/101‑1 (MQ=255)

                                               cTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAac                                                 >  1:3728859/1‑101 (MQ=255)

                                                   gAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAaccacc                                             >  1:3728864/1‑101 (MQ=255)

                                                   gAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAaccacc                                             >  2:3728863/1‑101 (MQ=255)

                                                    aaGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAAccacca                                            >  2:3728866/1‑101 (MQ=255)

                                                    aaGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAAccacca                                            <  2:3728399/101‑1 (MQ=255)

                                                     aGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAACCACCAg                                           <  2:3728804/101‑1 (MQ=255)

                                                      gCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAACCACCAGc                                          >  2:3728869/1‑101 (MQ=255)

                                                       cTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAACCACCAGcc                                         <  1:3728714/101‑1 (MQ=255)

                                                        tGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCg                                                                      >  1:3728874/1‑71 (MQ=255)

                                                        tGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAACCACCAGCCa                                        >  2:3728872/1‑101 (MQ=255)

                                                          gcgcGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAACCACCAGCCAcc                                      <  1:3728462/101‑1 (MQ=255)

                                                            gcgTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAACCACCAGCCAcccc                                    >  1:3728878/1‑101 (MQ=255)

                                                            gcgTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAACCACCAGCCAcccc                                    >  2:3728877/1‑101 (MQ=255)

                                                             cgTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAACCACCAGCCACCCCa                                   <  1:3728340/101‑1 (MQ=255)

                                                               ttgttCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAACCACCAGCCACCCCAGc                                 <  2:3728448/101‑1 (MQ=255)

                                                               ttgttCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAACCACCAGCCACCCCAGc                                 <  1:3728355/101‑1 (MQ=255)

                                                                tgttCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAACCACCAGCCACCCCAGcc                                >  1:3728881/1‑101 (MQ=255)

                                                                 gttCAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAACCACCAGCCACCCCAGCCg                               <  2:3728539/101‑1 (MQ=255)

                                                                    cAGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAACCACCAGCCACCCCAGCCGAGt                            >  1:3728884/1‑101 (MQ=255)

                                                                     aGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGcc                                                                                       <  1:3728473/41‑1 (MQ=255)

                                                                     aGTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAACCACCAGCCACCCCAGCCGAGtt                           <  1:3728624/101‑1 (MQ=255)

                                                                      gTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAACCACCAGCCACCCCAGCCGAGTTc                          <  2:3728534/101‑1 (MQ=255)

                                                                      gTGACCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAACCACCAGCCACCCCAGCCGAGTTc                          <  2:3728472/101‑1 (MQ=255)

                                                                         aCCGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAACCACCAGCCACCCCAGCCGAGTTCGTa                       >  2:3728886/1‑101 (MQ=255)

                                                                          ccGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATc                                                        <  2:3728421/67‑1 (MQ=255)

                                                                          ccGCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAACCACCAGCCACCCCAGCCGAGTTCGTaa                      <  1:3728419/101‑1 (MQ=255)

                                                                            gCCAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAACCACCAGCCACCCCAGCCGAGTTCGTAATa                    >  2:3728888/1‑101 (MQ=255)

                                                                             ccAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAACCACCAGCCACCCCAGCCGAGtt                           <  2:3728553/93‑1 (MQ=255)

                                                                             ccAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAACCACCAGCCACCCCAGCCGAGTTCGTAATAg                   <  1:3728515/101‑1 (MQ=255)

                                                                              cAGTGAGTGCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAACCACCAGCCACCCCAGCCGAGTTCGTAATAgg                  >  1:3728891/1‑101 (MQ=255)

                                                                                 tgagtgCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAACCACCAGCCACCCCAGCCGAGTTCGTAATAGGccc               <  1:3728741/101‑1 (MQ=255)

                                                                                  gagtgCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAACCACCAGCCACCCCAGCCGAGTTCGTAATAGGCCCa              >  1:3728895/1‑101 (MQ=255)

                                                                                  gagtgCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAACCACCAGCCACCCCAGCCGAGTTCGTAATAGGCCCa              >  2:3728894/1‑101 (MQ=255)

                                                                                    gtgCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAACCACCAGCCCCCCCAGCCGAGTTCGTAATAGGCCCATg            <  1:3728780/101‑1 (MQ=255)

                                                                                    gtgCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAACCACCAGCCACCCCAGCCGAGTTCGTAATAGGCCCATg            >  2:3728897/1‑101 (MQ=255)

                                                                                    gtgCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAACCACCAGCCACCCCAGCCGAGTTCGTAATAGGCCCATg            <  1:3728574/101‑1 (MQ=255)

                                                                                    gtgCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAACCACCAGCCACCCCAGCCGAGTTCGTAATAGGCCCATg            <  1:3728396/101‑1 (MQ=255)

                                                                                      gCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAACCACCAGCCACCCCAGCCGAGTTCGTAATAGGCCCATGCg          >  2:3728900/1‑101 (MQ=255)

                                                                                      gCATCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAACCACCAGCCACCCCAGCCGAGTTCGTAATAGGCCCATGCg          <  1:3728494/101‑1 (MQ=255)

                                                                                        aTCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAACCACCAGCCACCCCAGCCGAGTTCGTAATAGGCCCATGCGGa        >  1:3728903/1‑101 (MQ=255)

                                                                                         tCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAACCACCAGCCACCCCAGCCGAGTTCGTAATAGGCCCATGCGGaa       >  1:3728905/1‑101 (MQ=255)

                                                                                         tCAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAACCACCAGCCACCCCAGCCGAGTTCGTAATAGGCCCATGCGGaa       <  1:3728584/101‑1 (MQ=255)

                                                                                          cAGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAACCACCAGCCACCCCAGCCGAGTTCGTAATAGGCCCATGCGGAAc      <  1:3728538/101‑1 (MQ=255)

                                                                                           aGCGCAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAACCACCAGCCACCCCAGCCGAGTTCGTAATAGGCCCATGCGGAAcc     >  2:3728907/1‑101 (MQ=255)

                                                                                            gcgcAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAACCACCAGCCACCCCAGCCGAGTTCGTAATAGGCCCATGCGGAACCg    <  2:3728591/101‑1 (MQ=255)

                                                                                            gcgcAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAACCACCAGCCACCCCAGCCGAGTTCGTAATAGGCCCATGCGGAACCg    >  1:3728910/1‑101 (MQ=255)

                                                                                             cgcAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAACCACCAGCCACCCCAGCCGAGTTCg                         <  2:3728489/79‑1 (MQ=255)

                                                                                              gcAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAACCACCAGCCACCCCAGCCGAGTTCGTAATAGGCCCATGCGGaa       <  2:3728717/96‑1 (MQ=255)

                                                                                              gcAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAACCACCAGCCACCCCAGCCGAGTTCGTAATAGGCCCATGCGGAACCGAg  >  1:3728913/1‑101 (MQ=255)

                                                                                              gcAGCCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAACCACCAGCCACCCCAGCCGAGTTCGTAATAGGCCCATGCGGAACCGAg  >  2:3728914/1‑101 (MQ=255)

CAACAGACACAACGAGAAGGCACTGATTGCCAGCAGTAATGTCCACGCTTTGAAGCTGGCGCGTTGTTCAGTGACCGCCAGTGAGTGCATCAGCGCAGTCCCCACCAGCCACGGCATAAACGAGGCGTTTTCTACCGGATCCCAGAACCACCAGCCACCCCAGCCGAGTTCGTAATAGGCCCATGCGGAACCGAG  >  NC_000913/2294038‑2294232

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`