BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,968,626	T→C	T118A (ACA→GCA)	rppH ←	RNA pyrophosphohydrolase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,968,626	0	T	C	100.0%	1068.7 / NA	245	T118A (ACA→GCA)	rppH	RNA pyrophosphohydrolase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (129/116); total (129/116)

Only 100 of 247 total aligned reads displayed.

CTCTTTCATTACCCTACGGTAGACATCACGTTTAAATGACACCACCTGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGTACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCATTTTTGTTTTTGGCCGATACAAACCGGCTTCGTGTCCCAA  >  NC_000913/2968528‑2968723

ctctTTCATTACCCTACGGTAGACATCACGTTTAAATGACACCACCTGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCAc                                                                                                 >  1:4703563/1‑101 (MQ=255)

 tctTTCATTACCCTACGGTAGACATCACGTTTAAATGACACCACCTGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCAct                                                                                                <  2:4702863/101‑1 (MQ=255)

  ctTTCATTACCCTACGGTAGACATCACGTTTAAATGACACCACCTGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCActg                                                                                               <  2:4703384/101‑1 (MQ=255)

     tCATTACCCTACGGTAGACATCACGTTTAAATGACACCACCTGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCActgctg                                                                                            >  1:4703567/1‑101 (MQ=255)

     tCATTACCCTACGGTAGACATCACGTTTAAATGACACCACCTGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCActgctg                                                                                            <  1:4703462/101‑1 (MQ=255)

       aTTACCCTACGGTAGACATCACGTTTAAATGACACCACCTGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGt                                                                                          >  1:4703570/1‑101 (MQ=255)

         tACCCTACGGTAGACATCACGTTTAAATGACACCACCTGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGttt                                                                                        >  2:4703573/1‑101 (MQ=255)

          aCCCTACGGTAGACATCACGTTTAAATGACACCACCTGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTg                                                                                       <  1:4703179/101‑1 (MQ=255)

            ccTACGGTAGACATCACGTTTAAATGACACCACCTGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCa                                                                                     >  1:4703574/1‑101 (MQ=255)

             cTACGGTAGACATCACGTTTAAATGACACCACCTGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCat                                                                                    <  2:4703237/101‑1 (MQ=255)

             cTACGGTAGACATCACGTTTAAATGACACCACCTGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCat                                                                                    >  1:4703576/1‑101 (MQ=255)

               aCGGTAGACATCACGTTTAAATGACACCACCTGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCatat                                                                                  >  2:4703579/1‑101 (MQ=255)

               aCGGTAGACATCACGTTTAAATGACACCACCTGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCatat                                                                                  <  1:4703089/101‑1 (MQ=255)

                cGGTAGACATCACGTTTAAATGACACCACCTGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATAtt                                                                                 <  1:4702861/101‑1 (MQ=255)

                cGGTAGACATCACGTTTAAATGACACCACCTGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATAtt                                                                                 <  2:4703060/101‑1 (MQ=255)

                 ggTAGACATCACGTTTAAATGACACCACCTGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTg                                                                                       <  1:4703220/94‑1 (MQ=255)

                 ggTAGACATCACGTTTAAATGACACCACCTGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTg                                                                                <  1:4703152/101‑1 (MQ=255)

                   tAGACATCACGTTTAAATGACACCACCTGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGAt                                                                              <  1:4703301/101‑1 (MQ=255)

                   tAGACATCACGTTTAAATGACACCACCTGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGAt                                                                              >  1:4703581/1‑101 (MQ=255)

                     gACATCACGTTTAAATGACACCACCTGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGAttt                                                                            <  2:4703260/101‑1 (MQ=255)

                     gACATCACGTTTAAATGACACCACCTGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGAttt                                                                            >  1:4703584/1‑101 (MQ=255)

                      aCATCACGTTTAAATGACACCACCTGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTc                                                                           >  1:4703587/1‑101 (MQ=255)

                          cACGTTTAAATGACACCACCTGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCa                                                                       >  1:4703589/1‑101 (MQ=255)

                           aCGTTTAAATGACACCACCTGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCAt                                                                      >  1:4703592/1‑101 (MQ=255)

                           aCGTTTAAATGACACCACCTGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCAt                                                                      <  2:4703227/101‑1 (MQ=255)

                           aCGTTTAAATGACACCACCTGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCAt                                                                      <  1:4703283/101‑1 (MQ=255)

                            cGTTTAAATGACACCACCTGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATc                                                                     <  1:4703251/101‑1 (MQ=255)

                            cGTTTAAATGACACCACCTGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATc                                                                     >  2:4703595/1‑101 (MQ=255)

                             gTTTAAATGACACCACCTGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATcg                                                                    >  1:4703596/1‑101 (MQ=255)

                               ttAAATGACACCACCTGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATcgcc                                                                  >  1:4703599/1‑101 (MQ=255)

                                tAAATGACACCACCTGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATcgccg                                                                 >  2:4703602/1‑101 (MQ=255)

                                 aaaTGACACCACCTGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATcgccgc                                                                >  1:4703603/1‑101 (MQ=255)

                                     gACACCACCTGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCAc                                                            >  2:4703607/1‑101 (MQ=255)

                                      acacCACCTGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCAcc                                                           >  1:4703608/1‑101 (MQ=255)

                                       caccacCTGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCActgctg                                                                                            <  2:4703318/67‑1 (MQ=255)

                                       caccacCTGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCa                                                          <  1:4703261/101‑1 (MQ=255)

                                       caccacCTGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCa                                                          <  2:4703382/101‑1 (MQ=255)

                                        accaccTGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAg                                                         <  2:4703172/101‑1 (MQ=255)

                                        accaccTGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAg                                                         >  1:4703610/1‑101 (MQ=255)

                                          caccTGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCt                                                       <  2:4703033/101‑1 (MQ=255)

                                           accTGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTg                                                      >  1:4703614/1‑101 (MQ=255)

                                            ccTGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTg                                                      <  2:4703132/100‑1 (MQ=255)

                                            ccTGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGc                                                     <  2:4703461/101‑1 (MQ=255)

                                              tGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCaa                                                   <  2:4703304/101‑1 (MQ=255)

                                              tGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCaa                                                   >  2:4703616/1‑101 (MQ=255)

                                                tCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAaga                                                 <  2:4703367/101‑1 (MQ=255)

                                                 cTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAagag                                                >  1:4703620/1‑101 (MQ=255)

                                                 cTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAagag                                                >  2:4703619/1‑101 (MQ=255)

                                                 cTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAagag                                                <  2:4702978/101‑1 (MQ=255)

                                                   gACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGaa                                              >  1:4703624/1‑101 (MQ=255)

                                                    aCCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGaaa                                             <  1:4703193/101‑1 (MQ=255)

                                                    aCCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGaaa                                             >  2:4703626/1‑101 (MQ=255)

                                                      cGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAAcc                                           >  1:4703628/1‑101 (MQ=255)

                                                      cGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAAc                                            <  2:4703292/100‑1 (MQ=255)

                                                       ggATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCa                                          <  2:4703356/101‑1 (MQ=255)

                                                       ggATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCa                                          >  2:4703630/1‑101 (MQ=255)

                                                        gATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCAt                                         <  2:4703517/101‑1 (MQ=255)

                                                        gATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCAt                                         >  1:4703632/1‑101 (MQ=255)

                                                           aCCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCAtttt                                      >  2:4703637/1‑101 (MQ=255)

                                                            ccAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCAttttt                                     >  1:4703638/1‑101 (MQ=255)

                                                              aGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAAc                                            <  2:4703198/92‑1 (MQ=255)

                                                              aGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCAtttttgt                                   >  1:4703640/1‑101 (MQ=255)

                                                               gTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCAtttttgtt                                  <  2:4703187/101‑1 (MQ=255)

                                                               gTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCAtttttgtt                                  >  2:4703642/1‑101 (MQ=255)

                                                               gTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCAtttttgtt                                  <  1:4703271/101‑1 (MQ=255)

                                                                tAACTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCAtttttgttt                                 >  2:4703646/1‑101 (MQ=255)

                                                                 aaCTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCAtttttgtttt                                <  2:4703267/101‑1 (MQ=255)

                                                                   cTTACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCAtttttgtttttg                              >  1:4703648/1‑101 (MQ=255)

                                                                    ttACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCATTTTTGTTTTTgg                             <  2:4703414/101‑1 (MQ=255)

                                                                    ttACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCATTTTTGTTTTTgg                             <  2:4703345/101‑1 (MQ=255)

                                                                     tACCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCATTTTTGTTTTTGGc                            >  1:4703650/1‑101 (MQ=255)

                                                                      aCCCATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCATTTTTGTTTTTGGcc                           <  1:4703348/101‑1 (MQ=255)

                                                                       cccATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCATTTTTGTTTTTGGCCg                          <  1:4703148/101‑1 (MQ=255)

                                                                        ccATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCATTTTTGTTTTTGGCCGa                         >  1:4703654/1‑101 (MQ=255)

                                                                         cATCGCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCATTTTTGTTTTTGGCCGAt                        >  2:4703656/1‑101 (MQ=255)

                                                                             gCCAGCCGTCAAGCTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCATTTTTGTTTTTGGCCg                          <  2:4703280/95‑1 (MQ=255)

                                                                             gCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCATTTTTGTTTTTGGCCGATACaa                    >  2:4703662/1‑101 (MQ=255)

                                                                             gCCAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCATTTTTGTTTTTGGCCGATACaa                    >  1:4703658/1‑101 (MQ=255)

                                                                              ccAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCATTTTTGTTTTTGGCCGATACaaa                   >  1:4703664/1‑101 (MQ=255)

                                                                              ccAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCATTTTTGTTTTTGGCCGATACaaa                   <  1:4703372/101‑1 (MQ=255)

                                                                               cAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCATTTTTGTTTTTGGCCGATACAAAc                  >  2:4703666/1‑101 (MQ=255)

                                                                               cAGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCATTTTTGTTTTTGGCCGATACAAAc                  >  1:4703667/1‑101 (MQ=255)

                                                                                aGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCATTTTTGTTTTTGGCCGATACAAAcc                 <  1:4703069/101‑1 (MQ=255)

                                                                                aGCCGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCATTTTTGTTTTTGGCCGATACAAAcc                 >  1:4703670/1‑101 (MQ=255)

                                                                                   cGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCATTTTTGTTTTTGGCCGATACAAACCGGc              >  2:4703675/1‑101 (MQ=255)

                                                                                   cGTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCATTTTTGTTTTTGGCCGATACAAACCGGc              >  1:4703673/1‑101 (MQ=255)

                                                                                    gTCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCAtttttgtt                                  <  2:4703336/80‑1 (MQ=255)

                                                                                     tCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCATTTTTGTTTTTGGCCGATACAAACCGGCtt            <  2:4703240/101‑1 (MQ=255)

                                                                                     tCAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCATTTTTGTTTTTGGCCGATACAAACCGGCtt            <  2:4703217/101‑1 (MQ=255)

                                                                                      cAAACTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCATTTTTGTTTTTGGCCGATACAAACCGGCTTc           >  2:4703678/1‑101 (MQ=255)

                                                                                       aaaCTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCATCTGCAAGAGAAACCATTTTTGTTTTTGGCCGATACAAACCGGCTTCg          <  2:4703493/101‑1 (MQ=255)

                                                                                        aaCTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCATTTTTGTTTTTGGCCGATACAAACCGGCTTCgt         <  2:4703248/101‑1 (MQ=255)

                                                                                         aCTCTGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCATTTTTGTTTTTGGCCGATACAAACCGGCTTCgtg        >  1:4703682/1‑101 (MQ=255)

                                                                                          ctctGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCATTTTTGTTTTTGGCCGATACAAACCGGCTTCgtgt       >  1:4703684/1‑101 (MQ=255)

                                                                                          ctctGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCATTTTTGTTTTTGGCCGATACAAACCGGCTTCgtgt       <  2:4703126/101‑1 (MQ=255)

                                                                                          ctctGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCATTTTTGTTTTTGGCCGATACAAACCGGCTTCgt         <  2:4703209/99‑1 (MQ=255)

                                                                                            ctGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCATTTTTGTTTTTGGCCGATACAAACCGGCTTCGTGTcc     >  2:4703686/1‑101 (MQ=255)

                                                                                             tGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCATTTTTGTTTTTGGCCGATACAAACCGGCTTCGTGTccc    >  1:4703689/1‑101 (MQ=255)

                                                                                             tGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCATTTTTGTTTTTGGCCGATACAAACCGGCTTCGTGTccc    <  1:4703224/101‑1 (MQ=255)

                                                                                             tGGTGCACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCATTTTTGTTTTTGGCCGATACAAACCGGCTTCGTGTccc    >  2:4703690/1‑101 (MQ=255)

CTCTTTCATTACCCTACGGTAGACATCACGTTTAAATGACACCACCTGTCTGACCGGATACCAGTAACTTACCCATCGCCAGCCGTCAAACTCTGGTGTACTGCTGGTTTGCATATTGATTTCTGCATCGCCGCTCACCAGCTGCAAGAGAAACCATTTTTGTTTTTGGCCGATACAAACCGGCTTCGTGTCCCAA  >  NC_000913/2968528‑2968723

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`