| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,305,029 | G→A | G263G (GGC→GGT) | mtr ← | tryptophan:H(+) symporter Mtr |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,305,029 | 0 | G | A | 98.6% | 1059.9 / NA | 277 | G263G (GGC→GGT) | mtr | tryptophan:H(+) symporter Mtr |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (157/116); minor base C (0/4); total (157/120) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.42e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 282 total aligned reads displayed.
CTCGCTACCGCAAAGTTTGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCGCCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCATCGTCGCCAGCAACCAGATGGTATACAGCGCCAGCGCCATCAGCGTACCGT > NC_000913/3304931‑3305126 | cTCGCTACCGCAAAGTTTGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTaccacc > 1:5216366/1‑101 (MQ=255)cTCGCTACCGCAAAGTTTGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTaccacc < 1:5215967/101‑1 (MQ=255) gCTACCGCAAAGTTTGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCtt < 2:5215970/101‑1 (MQ=255) gCTACCGCAAAGTTTGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCtt > 1:5216369/1‑101 (MQ=255) gCTACCGCAAAGTTTGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCtt < 2:5215990/101‑1 (MQ=255) gCTACCGCAAAGTTTGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCtt < 2:5215878/101‑1 (MQ=255) gCTACCGCAAAGTTTGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCCTAACGCCTGTACCAGCACATCAATATTACCACCCtt < 1:5215979/101‑1 (MQ=255) cTACCGCAAAGTTTGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTtc > 2:5216371/1‑101 (MQ=255) tACCGCAAAGTTTGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTtct < 2:5215959/101‑1 (MQ=255) tACCGCAAAGTTTGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTtct > 1:5216375/1‑101 (MQ=255) aCCGCAAAGTTTGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTtctc < 1:5215931/101‑1 (MQ=255) ccGCAAAGTTTGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTctct < 2:5216102/101‑1 (MQ=255) cGCAAAGTTTGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTg < 1:5216042/101‑1 (MQ=255) gCAAAGTTTGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGc < 1:5215854/101‑1 (MQ=255) gCAAAGTTTGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGc > 1:5216377/1‑101 (MQ=255) gCAAAGTTTGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGc < 2:5215898/101‑1 (MQ=255) aaGTTTGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAAt > 1:5216382/1‑101 (MQ=255) aaGTTTGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAAt > 2:5216381/1‑101 (MQ=255) aGTTTGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATa > 1:5216386/1‑101 (MQ=255) aGTTTGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATa < 2:5216195/101‑1 (MQ=255) aGTTTGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATa < 1:5215669/101‑1 (MQ=255) gTTTGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATAc > 2:5216388/1‑101 (MQ=255) ttGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCg > 1:5216393/1‑101 (MQ=255) tGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGa > 2:5216394/1‑101 (MQ=255) tGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGa < 2:5215935/101‑1 (MQ=255) aaCACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATaaa > 2:5216399/1‑101 (MQ=255) acacGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAAc > 1:5216400/1‑101 (MQ=255) cacGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACt > 1:5216402/1‑101 (MQ=255) acGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTc < 2:5215950/101‑1 (MQ=255) cGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTcc < 2:5216022/101‑1 (MQ=255) gACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCg < 2:5215980/101‑1 (MQ=255) gACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCg > 2:5216406/1‑101 (MQ=255) ccAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGa > 1:5216409/1‑101 (MQ=255) cagcagcagATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGAc > 1:5216412/1‑101 (MQ=255) agcagcagATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGa < 2:5215813/99‑1 (MQ=255) cagcagATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGAcgcg > 2:5216415/1‑101 (MQ=255) agcagATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCgg > 1:5216417/1‑101 (MQ=255) cagATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGa > 1:5216422/1‑101 (MQ=255) agATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGAt > 2:5216423/1‑101 (MQ=255) agATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGAt < 2:5216028/101‑1 (MQ=255) aTCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGAc > 2:5216426/1‑92 (MQ=255) tCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGtt < 1:5216139/101‑1 (MQ=255) tCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGtt < 1:5215777/101‑1 (MQ=255) tCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGtt < 2:5216004/101‑1 (MQ=255) ccAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTa > 1:5216429/1‑101 (MQ=255) cAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTAc > 1:5216431/1‑101 (MQ=255) aGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTAcc < 2:5216089/101‑1 (MQ=255) gACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTAccc > 1:5216436/1‑101 (MQ=255) aCTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCa > 2:5216440/1‑101 (MQ=255) cTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCAt < 2:5216059/101‑1 (MQ=255) tACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCAtc < 1:5215903/101‑1 (MQ=255) tACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCAtc < 2:5215883/101‑1 (MQ=255) ggCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCAtcgtc > 2:5216443/1‑101 (MQ=255) ggCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCAtcgtc < 1:5215876/101‑1 (MQ=255) gCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCAtcgtcg < 2:5216077/101‑1 (MQ=255) tGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCATCGTCGcc > 2:5216446/1‑101 (MQ=255) ttCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCATCGTCGCCAg < 1:5215713/101‑1 (MQ=255) ttCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCATCGTCGCCAg > 1:5216450/1‑101 (MQ=255) tCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCATCGTCGCCAGc < 2:5215944/101‑1 (MQ=255) cAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCATCGTCGCCAGCa > 2:5216452/1‑101 (MQ=255) gTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCATCGTCGCCAGCAAc > 1:5216456/1‑101 (MQ=255) tACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCATCGTCGCCAGCAAcc > 2:5216457/1‑101 (MQ=255) cgccgcTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCATCGTCGCCAGCAACCAg > 2:5216461/1‑101 (MQ=255) gccgcTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCATCGTCGCCAGCAACCAGa > 1:5216462/1‑101 (MQ=255) gccgcTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCATCGTCGCCAGCAACCAGa < 1:5216038/101‑1 (MQ=255) gcTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCATCGTCGCCAGCAACCGGATgg > 1:5216464/1‑101 (MQ=255) cTTAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCATCGTCGCCAGCAACCAGATGGt < 1:5216065/101‑1 (MQ=255) ttAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCATCGTCGCCAGCAACCAGATGGta > 2:5216468/1‑101 (MQ=255) tAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCATCGTCGCCAGCAACCAGATGGtat < 1:5216206/101‑1 (MQ=255) tAACGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCATCGTCGCCAGCAACCAGATGGtat > 2:5216472/1‑101 (MQ=255) aaCGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCATCGTCGCCAGCAACCAGATGGtata < 1:5216097/101‑1 (MQ=255) aaCGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCATCGTCGCCAGCAACCAGATGGtata > 1:5216477/1‑101 (MQ=255) aaCGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCATCGTCGCCAGCAACCAGATGGtata > 1:5216473/1‑101 (MQ=255) aCGCCTGTACCAGCACATCAATATTACCCCCCTTCTCTGCAATACCGAt < 2:5216128/49‑1 (MQ=255) cGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCATCGTCGCCAGCAACCAGATGGTATAca > 1:5216482/1‑101 (MQ=255) cGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCATCGTCGCCAGCAACCAGATGGTATAca < 1:5216241/101‑1 (MQ=255) cGCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCATCGTCGCCAGCAACCAGATGGTATAca > 2:5216480/1‑101 (MQ=255) gCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCATCGTCGCCAGCAACCAGATGGTATAcag < 2:5215748/101‑1 (MQ=255) gCCTGTACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCATCGTCGCCAGCAACCAGATGGTATAcag < 1:5216318/101‑1 (MQ=255) tACCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCATCGTCGCCAGCAACCAGATGGTATAcagcgcca > 1:5216487/1‑101 (MQ=255) aCCAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCATCGTCGCCAGCAACCAGATGGTATAcagcgccag > 2:5216489/1‑101 (MQ=255) ccAGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCATCGTCGCCAGCAACCAGATGGTATAcagcgccagc < 1:5216255/101‑1 (MQ=255) cAGCACATCAATATTATCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCAtcg > 1:5216493/1‑68 (MQ=255) aGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCATCGTCGCCAGCAACCAGATGGTATAcagcgccagcgc > 1:5216495/1‑101 (MQ=255) aGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCATCGTCGCCAGCAACCAGATGGTATAcagcgccagcgc > 2:5216497/1‑101 (MQ=255) aGCACATCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCATCGTCGCCAGCAACCAGATGGTATAcagcgccagcgc < 1:5216001/101‑1 (MQ=255) cacaTCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCATCGTCGCCAGCAACCAGATGGTATACAgcgccagcgcca > 2:5216501/1‑101 (MQ=255) cacaTCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCATCGTCGCCAGCAACCAGATGGTATACAgcgccagcgcca > 1:5216500/1‑101 (MQ=255) acaTCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCATCGTCGCCAGCAACCAGATGGTATACAGCGCCAGCGCCAt < 2:5216066/101‑1 (MQ=255) acaTCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCATCGTCGCCAGCAACCAGATGGTATACAGCGCCAGCGCCAt > 2:5216506/1‑101 (MQ=255) tCAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCATCGTCGCCAGCAACCAGATGGTATACAGCGCCAGCGCCATCAg > 1:5216508/1‑101 (MQ=255) cAATATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCATCGTCGCCAGCAACCAGATGGTATACAGCGCCAGCGCCATCAGc < 2:5216287/101‑1 (MQ=255) aaTATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCATCGTCGCCAGCAACCAGATGGTATACAGCGCCAGCGCCATCAGcg > 1:5216512/1‑101 (MQ=255) aaTATTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCATCGTCGCCAGCAAACAGATGGTATACAGCGCCAGCGCCATCAGcg < 1:5216021/101‑1 (MQ=255) atatTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCATCGTCGCCAGCAACCAGATGGTATACAGCGCCAGCGCCATCAGcgt > 2:5216514/1‑101 (MQ=255) atatTACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCATCGTCGCCAGCAACCAGATGGTATACAGCGCCAGCGCCATCAGcgt > 1:5216516/1‑101 (MQ=255) atTACCACCCTTCTATGCAATACCGATAAACTCCGGACGCGGGATGTTACCCATCGTCGCCAGCAACCAGATGGTATACAGCGCCAGCGCCATCAGcgtac > 2:5216519/1‑101 (MQ=255) tACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCATCGTCGc > 1:5216527/1‑58 (MQ=255) tACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCATCGTCGCCAGCAACCAGATGGTATACAGCGCCAGCGCCATCAGcgtaccg > 2:5216525/1‑101 (MQ=255) tACCACCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCATCGTCGCCAGCAACCAGATGGTATACAGCGCCAGCGCCATCAGcgtaccg > 1:5216524/1‑101 (MQ=255) | CTCGCTACCGCAAAGTTTGAGAACACGACCAGCAGCAGATCCAGACTACGGCTGTTCAGTACGCCGCTTAACGCCTGTACCAGCACATCAATATTACCGCCCTTCTCTGCAATACCGATAAACTCCGGACGCGGGATGTTACCCATCGTCGCCAGCAACCAGATGGTATACAGCGCCAGCGCCATCAGCGTACCGT > NC_000913/3304931‑3305126 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |