BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	409,904	T→C	D39G (GAC→GGC)	rdgC ←	nucleoid‑associated protein RdgC

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	409,904	0	T	C	100.0%	1236.3 / NA	283	D39G (GAC→GGC)	rdgC	nucleoid‑associated protein RdgC
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (134/149); total (134/149)

Only 100 of 285 total aligned reads displayed.

CTTCTTTGCGCGCGCAGATAACAATTTGACCATTGGCAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGTCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCTCTTCTGCACGCAGCGAAATCTCGCGGCTAAGACGGTAAACCATTAA  >  NC_000913/409806‑410001

cttcttTGCGCGCGCAGATAACAATTTGACCATTGGCAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGccc                                                                                                 >  1:607360/1‑101 (MQ=255)

 ttcttTGCGCGCGCAGATAACAATTTGACCATTGGCAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCt                                                                                                <  1:606626/101‑1 (MQ=255)

 ttcttTGCGCGCGCAGATAACAATTTGACCATTGGCAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCt                                                                                                >  2:607365/1‑101 (MQ=255)

 ttcttTGCGCGCGCAGATAACAATTTGACCATTGGCAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCt                                                                                                >  2:607361/1‑101 (MQ=255)

     ttGCGCGCGCAGATAACAATTTGACCATTGGCAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCt                                                                                            <  1:606955/101‑1 (MQ=255)

      tGCGCGCGCAGATAACAATTTGACCATTGGCAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTg                                                                                           <  2:606857/101‑1 (MQ=255)

      tGCGCGCGCAGATAACAATTTGACCATTGGCAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTg                                                                                           >  1:607368/1‑101 (MQ=255)

         gcgcgcAGATAACAATTTGACCATTGGCAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCg                                                                                        >  1:607372/1‑101 (MQ=255)

          cgcgcAGATAACAATTTGACCATTGGCAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGc                                                                                       >  2:607375/1‑101 (MQ=255)

           gcgcAGATAACAATTTGACCATTGGCAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCa                                                                                      >  1:607377/1‑101 (MQ=255)

           gcgcAGATAACAATTTGACCATTGGCAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCa                                                                                      <  2:606923/101‑1 (MQ=255)

            cgcAGATAACAATTTGACCATTGGCAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCAt                                                                                     >  2:607381/1‑101 (MQ=255)

             gcAGATAACAATTTGACCATTGGCAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATg                                                                                    <  1:606838/101‑1 (MQ=255)

             gcAGATAACAATTTGACCATTGGCAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATg                                                                                    >  1:607383/1‑101 (MQ=255)

              cAGATAACAATTTGACCATTGGCAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATgg                                                                                   >  2:607384/1‑101 (MQ=255)

               aGATAACAATTTGACCATTGGCAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATggg                                                                                  >  2:607387/1‑101 (MQ=255)

                 aTAACAATTTGACCATTGGCAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGt                                                                                >  1:607391/1‑101 (MQ=255)

                   aaCAATTTGACCATTGGCAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTaa                                                                              <  2:606824/101‑1 (MQ=255)

                   aaCAATTTGACCATTGGCAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTaa                                                                              >  1:607395/1‑101 (MQ=255)

                   aaCAATTTGACCATTGGCAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTaa                                                                              >  2:607396/1‑101 (MQ=255)

                     cAATTTGACCATTGGCAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAAt                                                                            <  2:606982/101‑1 (MQ=255)

                     cAATTTGACCATTGGCAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAAt                                                                            <  1:606875/101‑1 (MQ=255)

                     cAATTTGACCATTGGCAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAAt                                                                            <  2:606914/101‑1 (MQ=255)

                     cAATTTGACCATTGGCAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAAt                                                                            >  1:607399/1‑101 (MQ=255)

                      aaTTTGACCATTGGCAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCACTGGCTGCCGCATGGGGTAAATg                                                                           >  2:607403/1‑101 (MQ=255)

                       aTTTGACCATTGGCAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGc                                                                          <  1:607028/101‑1 (MQ=255)

                       aTTTGACCATTGGCAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGc                                                                          >  1:607404/1‑101 (MQ=255)

                       aTTTGACCATTGGCAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGc                                                                          <  2:606940/101‑1 (MQ=255)

                        tatGACCATTGGCAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGcc                                                                         <  2:607036/99‑1 (MQ=255)

                         ttGACCATTGGCAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCa                                                                        >  1:607410/1‑101 (MQ=255)

                          tGACCATTGGCAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCAt                                                                       <  2:607113/101‑1 (MQ=255)

                          tGACCATTGGCAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCAt                                                                       >  2:607411/1‑101 (MQ=255)

                           gACCATTGGCAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATc                                                                      <  1:607080/101‑1 (MQ=255)

                           gACCATTGGCAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATc                                                                      <  2:606973/101‑1 (MQ=255)

                            aCCATTGGCAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCg                                                                     >  2:607416/1‑101 (MQ=255)

                            aCCATTGGCAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCg                                                                     <  2:606784/101‑1 (MQ=255)

                             ccATTGGCAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGa                                                                    <  2:607266/101‑1 (MQ=255)

                               aTTGGCAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAgg                                                                  >  2:607418/1‑101 (MQ=255)

                               aTTGGCAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAgg                                                                  <  1:607019/101‑1 (MQ=255)

                               aTTGGCAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAgg                                                                  <  2:607016/101‑1 (MQ=255)

                                  ggCAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTa                                                               <  2:607007/101‑1 (MQ=255)

                                   gCAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAg                                                              >  2:607421/1‑101 (MQ=255)

                                   gCAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAg                                                              >  1:607422/1‑101 (MQ=255)

                                    cAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGc                                                             >  1:607425/1‑101 (MQ=255)

                                     aaCGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGcc                                                                                         >  2:607429/1‑72 (MQ=255)

                                     aaCGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCt                                                            <  2:607076/101‑1 (MQ=255)

                                      aCGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTg                                                           <  1:607102/101‑1 (MQ=255)

                                         tGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGttt                                                        >  1:607432/1‑101 (MQ=255)

                                            gTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTc                                                     >  2:607437/1‑101 (MQ=255)

                                            gTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTc                                                     <  1:606974/101‑1 (MQ=255)

                                             ttAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTcc                                                    >  1:607439/1‑101 (MQ=255)

                                               aaCGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCAt                                                  >  2:607441/1‑101 (MQ=255)

                                                aCGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCAtc                                                 <  1:607216/101‑1 (MQ=255)

                                                 cGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCAtct                                                <  2:606697/101‑1 (MQ=255)

                                                  gCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCAtctc                                               >  1:607444/1‑101 (MQ=255)

                                                      cGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCtcttct                                           <  1:607045/101‑1 (MQ=255)

                                                      cGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCtcttct                                           >  1:607448/1‑101 (MQ=255)

                                                        cTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCTCTTCTGc                                         <  2:606624/101‑1 (MQ=255)

                                                        cTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCTCTTCTGc                                         <  2:607003/101‑1 (MQ=255)

                                                         tgtgCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCTCTTCTGCa                                        <  2:606937/101‑1 (MQ=255)

                                                          gtgCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCTCTTCTGCAc                                       >  2:607450/1‑101 (MQ=255)

                                                             cGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCTCTTCTGCACGCa                                    >  1:607456/1‑101 (MQ=255)

                                                             cGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCTCTTCTGCACGCa                                    >  2:607454/1‑101 (MQ=255)

                                                             cGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCTCTTCTGCACGCa                                    <  1:606910/101‑1 (MQ=255)

                                                              gATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTc                                                     <  2:607149/83‑1 (MQ=255)

                                                              gATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCTCTTCTGCACGCAg                                   >  2:607457/1‑101 (MQ=255)

                                                              gATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCTCTTCTGCACGCAg                                   <  2:606759/101‑1 (MQ=255)

                                                                tCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCTCTTCTGCACGCAGCg                                 <  2:606952/101‑1 (MQ=255)

                                                                tCCCATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCTCTTCTGCACGCAGCg                                 >  1:607461/1‑101 (MQ=255)

                                                                 cccATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCTCTTCTGCACGCAGCGa                                >  2:607463/1‑101 (MQ=255)

                                                                 cccATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCTCTTCTGCACGCAGCGa                                <  1:607133/101‑1 (MQ=255)

                                                                  ccATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCTCTTCTGCACGCAGCGaa                               <  1:606922/101‑1 (MQ=255)

                                                                   cATCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCTCTTCTGCACGCAGCGaaa                              <  1:606847/101‑1 (MQ=255)

                                                                     tCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCTCTTCTGCACGCAGCGAAAtc                            >  2:607470/1‑101 (MQ=255)

                                                                     tCGGAGGAACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCTCTTCTGCACGCAGCGAAAtc                            >  1:607468/1‑101 (MQ=255)

                                                                       ggaggaACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCtctt                                             >  2:607473/1‑82 (MQ=255)

                                                                       ggaggaACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCTCTTCTGCACGCAGCGAAAtctc                          <  2:607059/101‑1 (MQ=255)

                                                                       ggaggaACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCTCTTCTGCACGCAGCGAAAtctc                          <  1:606996/101‑1 (MQ=255)

                                                                         aggaACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCTCTTCTGCACGCAGCGAAATCTcgc                        <  1:606801/101‑1 (MQ=255)

                                                                         aggaACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCTCTTCTGCACGCAGCGAAATCTcgc                        <  1:607119/101‑1 (MQ=255)

                                                                          ggaACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCtctt                                             <  2:606966/79‑1 (MQ=255)

                                                                          ggaACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCTCTTCTGCACGCAGCGAAATCTcgcg                       <  1:606962/101‑1 (MQ=255)

                                                                           gaACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCTCTTCTGCACGCAGCGAAATCTCGCgg                      <  2:607353/101‑1 (MQ=255)

                                                                           gaACCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCTCTTCTGCACGCAGCGAAATCTCGCgg                      <  1:606897/101‑1 (MQ=255)

                                                                            aaCCCAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCTCTTCTGCACGCAGCGAAATCTCGCGGc                     >  1:607476/1‑101 (MQ=255)

                                                                              cccAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCTCTTCTGCACGCAGCGAAATCTCGCGGCTa                   >  1:607478/1‑101 (MQ=255)

                                                                              cccAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCTCTTCTGCACGCAGCGAAATCTCGCGGCTa                   <  1:607009/101‑1 (MQ=255)

                                                                                cAGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCTCTTCTGCACGCAGCGAAATCTCGCGGCTAAg                 <  1:607040/101‑1 (MQ=255)

                                                                                 aGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCTCTTCTGCACGCAGCGAAATCTCGCGGCTAAGa                >  2:607482/1‑101 (MQ=255)

                                                                                 aGCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCTCTTCTGCACGCAGCGAAATCTCGCGGCTAAGa                >  1:607483/1‑101 (MQ=255)

                                                                                  gCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCTCTTCTGCACGCAGCGAAATCTCGCGGCTAAGAc               <  2:606803/101‑1 (MQ=255)

                                                                                  gCCCATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCTCTTCTGCACGCAGCGAAATCTCGCGGCTAAGAc               <  2:607213/101‑1 (MQ=255)

                                                                                     cATCTTCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCTCTTCTGCACGCAGCGAAATCTCGCGGCTAAGACg              >  1:607486/1‑99 (MQ=255)

                                                                                         ttCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCTCTTCTGCACGCAGCGAAATCTCGCGGCTAAGACGGTAAAc        >  2:607491/1‑101 (MQ=255)

                                                                                         ttCGCCATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCTCTTCTGCACGCAGCGAAATCTCGCGGCTAAGACGGTAAAc        <  1:606745/101‑1 (MQ=255)

                                                                                             ccATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCTCTTCTGCACGCAGCGAAATCTCGCGGCTAAGACGGTAAACCAtt    >  1:607494/1‑101 (MQ=255)

                                                                                             ccATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCTCTTCTGCACGCAGCGAAATCTCGCGGCTAAGACGGTAAACCAtt    <  1:607169/101‑1 (MQ=255)

                                                                                              cATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCTCTTCTGCACGCAGCGAAATCTCGCGGCTAAGACGGTAAACCATTa   <  1:607152/101‑1 (MQ=255)

                                                                                              cATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCTCTTCTGCACGCAGCGAAATCTCGCGGCTAAGACGGTAAACCATTa   <  1:607062/101‑1 (MQ=255)

                                                                                              cATGCCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCTCTTCTGCACGCAGCGAAATCTCGCGGCTAAGACGGTAAACCATTa   <  1:606891/101‑1 (MQ=255)

CTTCTTTGCGCGCGCAGATAACAATTTGACCATTGGCAACGTGCGTTAACGCATCGCTGTGCGATCCCATCGGAGGAACCCAGCCCATCTTCGCCATGTCCTGGCTGCCGCATGGGGTAAATGCCATCGAGGCTAGCTGTTTTTCCATCTCTTCTGCACGCAGCGAAATCTCGCGGCTAAGACGGTAAACCATTAA  >  NC_000913/409806‑410001

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`