Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 380,022 (G)10→9 intergenic (‑141/+47) frmR ← / ← yaiO DNA‑binding transcriptional repressor FrmR/outer membrane protein YaiO

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913380,0130G.97.6% 1062.7 / 14.0 211intergenic (‑132/+56)frmR/yaiODNA‑binding transcriptional repressor FrmR/outer membrane protein YaiO
Reads supporting (aligned to +/- strand):  ref base G (1/4);  new base . (147/59);  total (148/63)
Fisher's exact test for biased strand distribution p-value = 2.86e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 249 total aligned reads displayed.

ATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCG  >  NC_000913/379913‑380108
                                                                                                    |                                                                                               
ataGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAg                                                                                                 <  1:594978/101‑1 (MQ=255)
 taGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAgg                                                                                                >  2:595455/1‑101 (MQ=255)
    ggggggATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTTTCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggg                                                                                             >  1:595457/1‑101 (MQ=255)
    gggggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGCAAg                                                                                                 >  1:595461/1‑97 (MQ=255)
    gggggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggg                                                                                             >  2:595460/1‑101 (MQ=255)
     ggggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAgggggg                                                                                            <  1:594850/101‑1 (MQ=255)
     ggggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAgggggg                                                                                            <  2:594940/101‑1 (MQ=255)
      gggTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggg                                                                                           >  2:595464/1‑101 (MQ=255)
         tATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAgggggggggc                                                                                        >  2:595467/1‑100 (MQ=255)
          aTTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAgggggggggct                                                                                       >  1:595469/1‑99 (MQ=255)
            tCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAgggggggggctaa                                                                                     >  1:595473/1‑97 (MQ=255)
             cTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAAt                                                                                   >  2:595475/1‑101 (MQ=255)
              tataTGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATc                                                                                  >  1:595476/1‑101 (MQ=255)
               atatGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCg                                                                                 >  1:595481/1‑101 (MQ=255)
               atatGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCg                                                                                 >  2:595479/1‑101 (MQ=255)
                tatGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCgg                                                                                <  2:594996/101‑1 (MQ=255)
                 atttCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGc                                                                               >  2:595485/4‑101 (MQ=255)
                 atGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGc                                                                               >  1:595486/1‑101 (MQ=255)
                   gTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAg                                                                             >  1:595490/1‑101 (MQ=255)
                    tCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAgg                                                                            <  2:595180/101‑1 (MQ=255)
                     cAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAggg                                                                           >  1:595492/1‑101 (MQ=255)
                     cAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAggg                                                                           >  2:595493/1‑101 (MQ=255)
                          cATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAgg                                                                       >  1:595496/1‑100 (MQ=255)
                            tACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAg                                                                        >  1:595500/1‑97 (MQ=255)
                             aCCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAgg                                                                       >  2:595503/1‑97 (MQ=255)
                             aCCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGgccgc                                                                   >  2:595501/1‑101 (MQ=255)
                              ccccccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGTTAATCGGCAGGGAAGgccgcc                                                                  <  1:595250/101‑1 (MQ=255)
                              ccccccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGc                                                                               <  1:595104/88‑1 (MQ=255)
                                ccccTATAGTATATAACACTGGAGAATGAAATTTATCCGGTGAATGTGATCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGgc                                                                      >  2:595508/1‑95 (MQ=255)
                                ccccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAgg                                                                       >  1:595510/1‑94 (MQ=255)
                                  ccTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAgg                                                                       >  2:595511/1‑92 (MQ=255)
                                      taGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAgg                                                                       >  2:595518/1‑88 (MQ=255)
                                      taGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAg                                                          >  1:595514/1‑101 (MQ=255)
                                       aGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGGCCGcccc                                                                >  2:595520/1‑94 (MQ=255)
                                       aGTATATAACACTGGAGAATAAAATTTATCCGGCGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAgg                                                                       >  1:595521/1‑87 (MQ=255)
                                         tatataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAgg                                                                       >  2:595527/1‑85 (MQ=255)
                                         tatataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcgg                                                       >  1:595523/1‑101 (MQ=255)
                                          atataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAgg                                                                       >  1:595529/1‑84 (MQ=255)
                                           tataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGgcc                                                                     >  1:595531/1‑85 (MQ=255)
                                            ataACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAgg                                                                       >  1:595534/1‑82 (MQ=255)
                                             taACACTGGAGAATAAAATTTATCCGGTGAATGTGGGCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAgg                                                                       >  2:595536/1‑81 (MQ=255)
                                              aaCACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGGCCGcccc                                                                >  1:595538/1‑87 (MQ=255)
                                               acacTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGa                                                                          >  2:595541/1‑76 (MQ=255)
                                                  cTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGaa                                              >  1:595545/1‑101 (MQ=255)
                                                   tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAg                                             >  2:595547/1‑101 (MQ=255)
                                                   tGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAg                                             <  2:595027/101‑1 (MQ=255)
                                                     gagaATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGGCCGcccc                                                                >  1:595549/1‑80 (MQ=255)
                                                        aaTAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcggg                                                      >  1:595553/1‑87 (MQ=255)
                                                        aaTAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAA‑‑GGGGGGGGGCTAATCGGCAggg                                                                           >  1:595555/1‑65 (MQ=255)
                                                         aTAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCa                                       >  1:595559/1‑101 (MQ=255)
                                                         aTAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCa                                       >  2:595557/1‑101 (MQ=255)
                                                         aTAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAA‑‑GGGGGGGGCTAATCGGCAGGGAAGgc                                                                      >  1:595561/1‑69 (MQ=255)
                                                          tAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGGCCGcccc                                                                >  2:595564/1‑75 (MQ=255)
                                                           aaaaTTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAgg                                                                       >  2:595567/1‑67 (MQ=255)
                                                            aaaTTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGgccg                                                                    >  1:595571/1‑69 (MQ=255)
                                                            aaaTTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAg                                                          >  2:595569/1‑79 (MQ=255)
                                                             aaTTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAAt                                   <  1:594751/101‑1 (MQ=255)
                                                               tttATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcgggcg                                                    >  1:595574/1‑82 (MQ=255)
                                                                ttATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAg                                                                        >  1:595578/1‑61 (MQ=255)
                                                                 tATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAgg                                                                       >  2:595579/1‑61 (MQ=255)
                                                                  aTCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcgg                                                       <  1:595220/76‑1 (MQ=255)
                                                                    ccGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCa                                                                              <  2:595081/51‑1 (MQ=255)
                                                                    ccGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCgg                                                              >  2:595581/1‑67 (MQ=255)
                                                                     cGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAgg                                                                       >  1:595585/1‑57 (MQ=255)
                                                                      ggTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGc                                                                               >  2:595587/1‑48 (MQ=255)
                                                                      ggTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTc                          <  1:595064/101‑1 (MQ=255)
                                                                       gTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAgg                                                                       >  2:595590/1‑55 (MQ=255)
                                                                       gTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAg                                                                        >  1:595591/1‑54 (MQ=255)
                                                                        tGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAAACAGAATTTCCAGGTCAg                        <  2:594787/101‑1 (MQ=255)
                                                                         gAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAgg                                                                       >  2:595595/1‑53 (MQ=255)
                                                                          aaTGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAg                                                                        >  1:595597/1‑51 (MQ=255)
                                                                          aaTGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGAc                      <  1:595086/101‑1 (MQ=255)
                                                                            tgtgGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAg                        <  1:595138/97‑1 (MQ=255)
                                                                              tgGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGGCcccccc                                                                >  1:595601/1‑55 (MQ=255)
                                                                              tgGTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAg                                                >  2:595600/1‑71 (MQ=255)
                                                                                gTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCgg                                                              >  2:595605/1‑55 (MQ=255)
                                                                                gTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCa                                       <  2:595198/78‑1 (MQ=255)
                                                                                gTCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGAc                      <  2:594918/95‑1 (MQ=255)
                                                                                 tCGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGc               >  1:595607/1‑101 (MQ=255)
                                                                                  cGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATa                                                           <  1:595046/56‑1 (MQ=255)
                                                                                  cGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTc                          <  2:595015/89‑1 (MQ=255)
                                                                                  cGGAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCa              <  1:595126/101‑1 (MQ=255)
                                                                                   ggAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGGCCGcccc                                                                >  1:595610/1‑50 (MQ=255)
                                                                                   ggAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgc                                                         <  1:595171/57‑1 (MQ=255)
                                                                                   ggAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAg                                      <  1:595329/76‑1 (MQ=255)
                                                                                   ggAAAACAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAAttt                                 <  1:595196/81‑1 (MQ=255)
                                                                                   gaaaaaCAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGAt                                                            <  2:595303/52‑1 (MQ=255)
                                                                                     aaaaCAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAgg                                                                       >  2:595614/1‑41 (MQ=39)
                                                                                     aaaaCAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAAtaa                                       >  1:595613/1‑71 (MQ=255)
                                                                                     aaaaCAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTg                <  2:595203/96‑1 (MQ=255)
                                                                                         cAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAgg                                                                       >  2:595621/1‑37 (MQ=255)
                                                                                         cAAAGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGGGcccccc                                                                >  2:595618/1‑44 (MQ=255)
                                                                                          aaaGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGGCcccccc                                                                >  1:595622/1‑43 (MQ=255)
                                                                                          aaaGAGGAAAGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCa       <  2:595127/100‑1 (MQ=255)
                                                                                             gagGAAAGGGGGGGGGCTAATCGGCAGGGAAGGCCGccc                                                                 >  1:595626/1‑39 (MQ=255)
                                                                                              agGAAAGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAg                                                          <  2:595050/45‑1 (MQ=255)
                                                                                               ggAAAGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcgggcg                                                    <  2:594987/50‑1 (MQ=255)
                                                                                               agAAAGGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATa                                                           <  2:595192/43‑1 (MQ=255)
                                                                                                  aaGGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCa                              <  2:595234/70‑1 (MQ=255)
                                                                                                  aaGGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAg      <  2:595136/94‑1 (MQ=255)
                                                                                                    |                                                                                               
ATAGGGGGGTATTCTATATGTCAATGCATACCCCCCTATAGTATATAACACTGGAGAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGGGCGGCAGAAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCG  >  NC_000913/379913‑380108

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: