| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,001,732 | Δ1 bp | coding (2517/2601 nt) | elfC → | putative fimbrial usher protein ElfC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,001,730 | 0 | C | . | 99.6% | 1204.9 / ‑2.3 | 232 | coding (2515/2601 nt) | elfC | putative fimbrial usher protein ElfC |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base . (103/128); total (104/128) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.48e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.75e-01 | |||||||||||
Only 100 of 240 total aligned reads displayed.
CGGCGTACAGGCTAATAGCGGCATAATTGATGATGATGGCTCGCTCTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCTCCCGATCAAATTTGTCATATCAATTACGAGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGA > NC_000913/1001630‑1001826 | cGGCGTACAGGCTAATAGCGGCATAATTGATGATGATGGCTCGCTCTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCTc > 1:1545068/1‑101 (MQ=255) ggCGTACAGGCTAATAGCGGCATAATTGATGATGATGGCTCGCTCTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCTcc < 2:1544693/101‑1 (MQ=255) cGTACAGGCTAATAGCGGCATAATTGATGATGATGGCTCGCTCTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCTccga < 2:1544731/101‑3 (MQ=255) gTACAGGCTAATAGCGGCATAATTGATGATGATGGCTCGCTCTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCTccgat > 1:1545074/1‑98 (MQ=255) aCAGGCTAATAGCGGCATAATTGATGATGATGGCTCGCTCTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCa < 2:1544631/101‑1 (MQ=255) aGGCTAATAGCGGCATAATTGATGATGATGGCTCGCTCTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCaaa < 1:1544317/101‑1 (MQ=255) ggCTAATAGCGGCATAATTGATGATGATGGCTCGCTCTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAAt < 1:1544475/101‑1 (MQ=255) cTAATAGCGGCATAATTGATGATGATGGCTCGCTCTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAAttt > 1:1545086/1‑101 (MQ=255) aaTAGCGGCATAATTGATGATGATGGCTCGCTCTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGt > 1:1545089/1‑101 (MQ=255) aTAGCGGCATAATTGATGATGATGGCTCGCTCTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTc < 1:1544583/101‑1 (MQ=255) gCGGCATAATTGATGATGATGGCTCGCTCTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCata < 2:1544766/101‑1 (MQ=255) gCGGCATAATTGATGATGATGGCTCGCTCTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCata > 1:1545096/1‑101 (MQ=255) gCATAATTGATGATGATGGCTCGCTCTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCa < 2:1544792/101‑1 (MQ=255) cATAATTGATGATGATGGCTCGCTCTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCaa < 1:1544505/101‑1 (MQ=255) cATAATTGATGATGATGGCTCGCTCTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCaa < 1:1544803/101‑1 (MQ=255) cATAATTGATGATGATGGCTCGCTCTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCaa < 1:1544660/101‑1 (MQ=255) cATAATTGATGATGATGGCTCGCTCTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCaa < 1:1544864/101‑1 (MQ=255) tAATTGATGATGATGGCTCGCTCTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAAtt < 1:1544729/101‑1 (MQ=255) tAATTGATGATGATGGCTCGCTCTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAAtt > 1:1545103/1‑101 (MQ=255) aaTTGATGATGATGGCTCGCTCTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTa < 1:1544671/101‑1 (MQ=255) tgatgatgaTGGCTCGCTCTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACgg < 1:1544679/101‑2 (MQ=255) tgatgatgaTGGCTCGCTCTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACgg < 1:1544591/101‑2 (MQ=255) tgatgatgaTGGCTCGCTCTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACgg > 1:1545108/1‑100 (MQ=255) gatgatgatGGCTCGCTCTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACggg < 1:1544888/101‑3 (MQ=255) tgatgatgGCTCGCTCTATATGGCGGGGTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCt > 1:1545111/1‑101 (MQ=255) atgatgGCTCGCTCTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCata > 1:1545113/1‑86 (MQ=255) atgatgGCTCGCTCTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTa < 2:1544622/101‑1 (MQ=255) atgatgGCTCGCTCTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTa < 2:1544711/101‑1 (MQ=255) atgGCTCGCTCTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCg > 1:1545116/1‑101 (MQ=255) ggCTCGCTCTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGaa < 2:1544611/101‑1 (MQ=255) ggCTCGCTCTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGaa < 1:1544718/101‑1 (MQ=255) gctcgctcTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGaac < 2:1544813/101‑1 (MQ=255) ctcgctcTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGaaca < 2:1544851/101‑1 (MQ=255) ctcgctcTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGaaca < 2:1544722/101‑1 (MQ=255) tcgctcTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGaacaa > 1:1545119/1‑101 (MQ=255) gctcTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAacaaca > 1:1545122/1‑101 (MQ=255) tctATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACaaa < 1:1544840/101‑1 (MQ=255) tctATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACaaa > 1:1545126/1‑101 (MQ=255) ctATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAAt > 1:1545128/1‑101 (MQ=255) tataTGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAAtt > 1:1545130/1‑101 (MQ=255) atatGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTa > 2:1545133/1‑101 (MQ=255) tatGGCGGTTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTaa < 2:1544678/101‑1 (MQ=255) atGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAAcaacaa > 1:1545137/1‑95 (MQ=255) atGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAAc < 2:1544590/101‑1 (MQ=255) tGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAAct < 2:1544741/101‑1 (MQ=255) tGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAAct > 2:1545138/1‑101 (MQ=255) tGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAAct < 1:1544641/101‑1 (MQ=255) gCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAActct < 2:1544703/101‑1 (MQ=255) cGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTg > 1:1545140/1‑101 (MQ=255) cGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTg < 2:1544574/101‑1 (MQ=255) cGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTg < 1:1544634/101‑1 (MQ=255) cGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTg < 2:1544981/101‑1 (MQ=255) ggTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCg < 2:1544893/101‑1 (MQ=255) ttACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGAtt > 1:1545144/1‑101 (MQ=255) ttACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGAtt < 1:1544753/101‑1 (MQ=255) tACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTa < 1:1544551/101‑1 (MQ=255) aCCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTAc < 2:1544858/101‑1 (MQ=255) ccGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTAcg > 2:1545147/1‑101 (MQ=255) ccGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTAcg > 1:1545146/1‑101 (MQ=255) cGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTAcgc > 1:1545149/1‑101 (MQ=255) ggCGAAGGGAACAATACGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTAcgcg < 1:1544694/101‑1 (MQ=255) ggCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTAcgcg > 1:1545153/1‑101 (MQ=255) ggCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTAcgcg < 1:1544757/101‑1 (MQ=255) cGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGaa > 2:1545156/1‑101 (MQ=255) cGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGaa < 1:1544897/101‑1 (MQ=255) cGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGaa < 1:1544736/101‑1 (MQ=255) gAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAAt > 1:1545159/1‑101 (MQ=255) gAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAAt < 1:1544603/101‑1 (MQ=255) gAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAAt > 2:1545158/1‑101 (MQ=255) gAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAAt < 2:1544758/101‑1 (MQ=255) aaGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATg < 1:1544824/101‑1 (MQ=255) aaGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATg > 2:1545163/1‑101 (MQ=255) ggAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGAt < 1:1544568/101‑1 (MQ=255) gAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATg > 2:1545167/1‑101 (MQ=255) gAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATg > 1:1545166/1‑101 (MQ=255) aaTAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCat > 2:1545169/1‑101 (MQ=255) aTAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCata > 1:1545172/1‑101 (MQ=255) aaGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATg < 2:1544822/101‑1 (MQ=255) aGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGc > 2:1545175/1‑101 (MQ=255) gCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCa < 2:1544734/101‑1 (MQ=255) cGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAg < 2:1544616/101‑1 (MQ=255) gTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGc < 2:1544799/91‑1 (MQ=255) gTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGa > 1:1545177/1‑101 (MQ=255) gTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGa > 2:1545178/1‑101 (MQ=255) gcgcTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATa < 1:1544812/101‑1 (MQ=255) gcTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAAt < 2:1544774/101‑1 (MQ=255) gcTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAAt > 2:1545183/1‑101 (MQ=255) cTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATc < 1:1544743/101‑1 (MQ=255) cTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATc > 2:1545185/1‑101 (MQ=255) tGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCa < 2:1544667/93‑1 (MQ=255) tGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCt > 1:1545187/1‑101 (MQ=255) ggggCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCtt > 2:1545189/1‑101 (MQ=255) gggCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCttt > 1:1545193/1‑101 (MQ=255) gggCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCttt > 2:1545192/1‑101 (MQ=255) ggCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTg < 2:1544841/101‑1 (MQ=255) cGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGga < 1:1544997/101‑1 (MQ=255) gAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGgag > 1:1545197/1‑101 (MQ=255) gAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGgag > 1:1545199/1‑101 (MQ=255) gAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGgag > 2:1545200/1‑101 (MQ=255) aaGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGgaga > 1:1545203/1‑101 (MQ=255) | CGGCGTACAGGCTAATAGCGGCATAATTGATGATGATGGCTCGCTCTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCTCCCGATCAAATTTGTCATATCAATTACGAGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGA > NC_000913/1001630‑1001826 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |