BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,941,433	C→T	intergenic (‑106/‑375)	yieP ← / → rrsC	putative transcriptional regulator YieP/16S ribosomal RNA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,941,433	0	C	T	100.0%	1439.9 / NA	352	intergenic (‑106/‑375)	yieP/rrsC	putative transcriptional regulator YieP/16S ribosomal RNA
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (177/175); total (177/175)

Only 100 of 358 total aligned reads displayed.

CTTCCTTTTTCTTTTTATTCCTCCTTAGTATGCCACCAGGAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGCTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACA  >  NC_000913/3941335‑3941529

  tCCTTTTTCTTTTTATTCCTCCTTAGTATGCCACCAGGAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTtttt                                                                                              >  2:6083579/1‑101 (MQ=255)

   ccTTTTTCTTTTTATTCCTCCTTAGTATGCCACCAGGAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTg                                                                                             <  2:6082852/101‑1 (MQ=255)

    ctttttctttttATTCCTCCTTAGTATGCCACCAGGAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGc                                                                                            <  1:6083349/101‑1 (MQ=255)

    ctttttctttttATTCCTCCTTAGTATGCCACCAGGAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGc                                                                                            >  2:6083583/1‑101 (MQ=255)

      ttttctttttATTCCTCCTTAGTATGCCACCAGGAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTg                                                                                          >  1:6083585/1‑101 (MQ=255)

         tctttttATTCCTCCTTAGTATGCCACCAGGAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGaaa                                                                                       >  2:6083591/1‑101 (MQ=255)

           tttttATTCCTCCTTAGTATGCCACCAGGAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGaaaaa                                                                                     >  2:6083596/1‑101 (MQ=255)

            ttttATTCCTCCTTAGTATGCCACCAGGAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGaaaaaa                                                                                    >  1:6083598/1‑101 (MQ=255)

             tttATTCCTCCTTAGTATGCCACCAGGAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAAt                                                                                   <  1:6083138/101‑1 (MQ=255)

              ttATTCCTCCTTAGTATGCCACCAGGAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATg                                                                                  >  1:6083606/1‑101 (MQ=255)

              ttATTCCTCCTTAGTATGCCACCAGGAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATg                                                                                  >  2:6083603/1‑101 (MQ=255)

               tATTCCTCCTTAGTATGCCACCAGGAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGaaaaaa                                                                                    >  1:6083613/1‑98 (MQ=255)

               tATTCCTCCTTAGTATGCCACCAGGAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATgc                                                                                 >  1:6083609/1‑101 (MQ=255)

               tATTCCTCCTTAGTATGCCACCAGGAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATgc                                                                                 <  2:6082975/101‑1 (MQ=255)

                 ttCCTCCTTAGTATGCCACCAGGAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATgcgc                                                                               >  2:6083615/1‑101 (MQ=255)

                 ttCCTCCTTAGTATGCCACCAGGAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATgcgc                                                                               <  2:6083290/101‑1 (MQ=255)

                  tcctccTTAGTATGCCACCAGGAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGcgcg                                                                              >  2:6083619/1‑101 (MQ=255)

                   cctcctTAGTATGCCACCAGGAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTACCGGGGTTTTTGCTGAAAAAAt                                                                                   >  2:6083625/1‑95 (MQ=255)

                   cctcctTAGTATGCCACCAGGAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCgg                                                                             >  1:6083623/1‑101 (MQ=255)

                    ctcctTAGTATGCCACCAGGAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGt                                                                            <  1:6082643/101‑1 (MQ=255)

                       ctTAGTATGCCACCAGGAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAg                                                                         >  2:6083630/1‑101 (MQ=255)

                        ttAGTATGCCACCAGGAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGa                                                                        <  1:6083192/101‑1 (MQ=255)

                        ttAGTATGCCACCAGGAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGa                                                                        >  1:6083632/1‑101 (MQ=255)

                         tAGTATGCCACCAGGAAGTGTGATTATGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGaa                                                                       <  2:6082914/101‑1 (MQ=255)

                         tAGTATGCCACCAGGAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGaa                                                                       <  2:6083216/101‑1 (MQ=255)

                          aGTATGCCACCAGGAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGaaa                                                                      <  1:6083098/101‑1 (MQ=255)

                           gTATGCCACCAGGAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGaaaa                                                                     >  2:6083640/1‑101 (MQ=255)

                           gTATGCCACCAGGAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGaaaa                                                                     <  1:6083159/101‑1 (MQ=255)

                           gTATGCCACCAGGAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGaaaa                                                                     >  1:6083638/1‑101 (MQ=255)

                           gTATGCCACCAGGAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGaaaa                                                                     <  2:6083315/101‑1 (MQ=255)

                              tGCCACCAGGAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAatta                                                                  >  1:6083646/1‑101 (MQ=255)

                               gCCACCAGGAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAattat                                                                 <  2:6083132/101‑1 (MQ=255)

                                ccaccaGGAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAattatt                                                                <  1:6083162/101‑1 (MQ=255)

                                  accaGGAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTAtttt                                                              >  2:6083649/1‑101 (MQ=255)

                                  accaGGAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTAtttt                                                              <  1:6083049/101‑1 (MQ=255)

                                   ccaGGAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGa                                                                        <  1:6083272/90‑1 (MQ=255)

                                   ccaGGAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTAtttt                                                              <  2:6083093/100‑1 (MQ=255)

                                   ccaGGAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTa                                                             <  1:6083144/101‑1 (MQ=255)

                                    caGGAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTaa                                                            <  1:6083085/101‑1 (MQ=255)

                                     aGGAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGACAAAATGCGCGGTCAGAAAATTATTTTaaa                                                           >  1:6083653/1‑101 (MQ=255)

                                     aGGAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTcaa                                                           <  1:6083307/101‑1 (MQ=255)

                                     aGGAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTa                                                             <  1:6083233/99‑1 (MQ=255)

                                      ggAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAAt                                                          <  1:6082996/101‑1 (MQ=255)

                                      ggAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAAt                                                          >  2:6083655/1‑101 (MQ=255)

                                       gAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAAtt                                                         >  1:6083658/1‑101 (MQ=255)

                                         aGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTc                                                       <  1:6083109/101‑1 (MQ=255)

                                           tgtgATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCct                                                     >  1:6083663/1‑101 (MQ=255)

                                            gtgATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCctc                                                    <  1:6083024/101‑1 (MQ=255)

                                             tgATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCctct                                                   >  2:6083667/1‑101 (MQ=255)

                                             tgATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTACTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCctct                                                   >  1:6083666/1‑101 (MQ=255)

                                              gATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCtt                                                  <  2:6083353/101‑1 (MQ=255)

                                              gATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCtt                                                  <  1:6083284/101‑1 (MQ=255)

                                               aTTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTg                                                 <  1:6083067/101‑1 (MQ=255)

                                                ttACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGt                                                <  2:6083062/101‑1 (MQ=255)

                                                 tACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTc                                               >  2:6083673/1‑101 (MQ=255)

                                                  aCGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCa                                              <  1:6083514/101‑1 (MQ=255)

                                                  aCGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCa                                              <  2:6083266/101‑1 (MQ=255)

                                                    ggTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAgg                                            >  1:6083674/1‑101 (MQ=255)

                                                    ggTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAgg                                            <  1:6083206/101‑1 (MQ=255)

                                                     gTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGc                                           <  1:6083411/101‑1 (MQ=255)

                                                       tGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCg                                         <  2:6083045/101‑1 (MQ=255)

                                                        gCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCgg                                        <  2:6083187/101‑1 (MQ=255)

                                                        gCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCgg                                        <  2:6083201/101‑1 (MQ=255)

                                                        gCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCgg                                        >  1:6083679/1‑101 (MQ=255)

                                                         cAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCa                                              >  1:6083683/1‑94 (MQ=255)

                                                          aaaaaCGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGaa                                      >  2:6083685/1‑101 (MQ=255)

                                                           aaaaCGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAAt                                     <  1:6083252/101‑1 (MQ=255)

                                                            aaaCGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGt                                                <  2:6083125/89‑1 (MQ=255)

                                                            aaaCGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATa                                    <  1:6083179/101‑1 (MQ=255)

                                                             aaCGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATaa                                   >  2:6083692/1‑101 (MQ=255)

                                                             aaCGGCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATaa                                   >  1:6083693/1‑101 (MQ=255)

                                                                ggCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTc                                >  2:6083696/1‑101 (MQ=255)

                                                                 gCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTcc                               <  2:6083015/101‑1 (MQ=255)

                                                                 gCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTcc                               <  2:6083227/101‑1 (MQ=255)

                                                                 gCAAATTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTcc                               <  2:6083170/101‑1 (MQ=255)

                                                                   aaaTTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCt                             >  2:6083701/1‑101 (MQ=255)

                                                                    aaTTGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACt                                 >  1:6083704/1‑96 (MQ=255)

                                                                       tGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATaa                         >  2:6083709/1‑101 (MQ=255)

                                                                       tGCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATaa                         <  2:6083243/101‑1 (MQ=255)

                                                                        gCTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAAt                        <  2:6083177/101‑1 (MQ=255)

                                                                         cTTGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATg                       >  1:6083710/1‑101 (MQ=255)

                                                                          ttGTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATgc                      >  2:6083715/1‑101 (MQ=255)

                                                                            gTTTTATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATgcgc                    >  1:6083719/1‑101 (MQ=255)

                                                                             ttttATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGcc                   >  2:6083720/1‑101 (MQ=255)

                                                                              tttATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGcca                  >  2:6083724/1‑101 (MQ=255)

                                                                                tATGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGccacc                >  2:6083729/1‑101 (MQ=255)

                                                                                 aTGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGccacca               <  2:6083147/101‑1 (MQ=255)

                                                                                  tGGCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCcaccac              >  1:6083733/1‑101 (MQ=255)

                                                                                   ggCACATTAACGGGGTTTTTGCTGAAAAAATGCGCGGt                                                                            <  1:6082925/38‑1 (MQ=255)

                                                                                     cacaTTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGa           <  2:6083391/101‑1 (MQ=255)

                                                                                     cacaTTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGa           >  2:6083737/1‑101 (MQ=255)

                                                                                      acaTTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGac          >  1:6083740/1‑101 (MQ=255)

                                                                                       caTTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGaca         <  2:6083207/101‑1 (MQ=255)

                                                                                        aTTAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGacac        >  1:6083744/1‑101 (MQ=255)

                                                                                         ttAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACg       <  2:6083194/101‑1 (MQ=255)

                                                                                         ttAACGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACg       >  2:6083746/1‑101 (MQ=255)

                                                                                           aaCGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGa     >  2:6083750/1‑101 (MQ=255)

                                                                                            aCGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGaa    <  2:6083438/101‑1 (MQ=255)

                                                                                            aCGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGaa    <  2:6083326/101‑1 (MQ=255)

                                                                                            aCGGGGTTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGaa    >  2:6083754/1‑101 (MQ=255)

CTTCCTTTTTCTTTTTATTCCTCCTTAGTATGCCACCAGGAAGTGTGATTACGGTTGCAAAAACGGCAAATTGCTTGTTTTATGGCACATTAACGGGGCTTTTGCTGAAAAAATGCGCGGTCAGAAAATTATTTTAAATTTCCTCTTGTCAGGCCGGAATAACTCCCTATAATGCGCCACCACTGACACGGAACA  >  NC_000913/3941335‑3941529

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`