Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 368,313 C→T L36L (CTG→CTA)  mhpR ← DNA‑binding transcriptional activator MhpR

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913368,3130CT100.0% 667.4 / NA 165L36L (CTG→CTA) mhpRDNA‑binding transcriptional activator MhpR
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (89/76);  total (89/76)

Only 100 of 168 total aligned reads displayed.

TATCATCGGAGGGGCTACGGCGGACATATCCCTCTTCCTGCAGCGTCTCCAGCAGTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGCAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCGGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCAT  >  NC_000913/368216‑368410
                                                                                                 |                                                                                                 
 atcatcGGAGGGGCTACGGCGGACATATCCCTCTTCCTGCAGCGTCTCCAGCAGTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGcc                                                                                               >  2:577854/1‑101 (MQ=255)
  tcatcGGAGGGGCTACGGCGGACATATCCCTCTTCCTGCAGCGTCTCCAGCAGTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGccc                                                                                              >  1:577855/1‑101 (MQ=255)
   catcGGAGGGGCTACGGCGGACATATCCCTCTTCCTGCAGCGTCTCCAGCAGTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCg                                                                                             <  2:577567/101‑1 (MQ=255)
    atcGGAGGGGCTACGGCGGACATATCCCTCTTCCTGCAGCGTCTCCAGCAGTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGa                                                                                            >  1:577859/1‑101 (MQ=255)
     tcGGAGGGGCTACGGCGGACATATCCCTCTTCCTGCAGCGTCTCCAGCAGTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGAc                                                                                           >  2:577862/1‑101 (MQ=255)
      cGGAGGGGCTACGGCGGACATATCCCTCTTCCTGCAGCGTCTCCAGCAGTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGAc                                                                                           >  2:577864/1‑100 (MQ=255)
       ggAGGGGCTACGGCGGACATATCCCTCTTCCTGCAGCGTCTCCAGCAGTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGc                                                                                         >  1:577866/1‑101 (MQ=255)
       ggAGGGGCTACGGCGGACATATCCCTCTTCCTGCAGCGTCTCCAGCAGTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGc                                                                                         >  2:577865/1‑101 (MQ=255)
         aGGGGCTACGGCGGACATATCCCTCTTCCTGCAGCGTCTCCAGCAGTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTg                                                                                       >  2:577869/1‑101 (MQ=255)
             gCTACGGCGGACATATCCCTCTTCCTGCAGCGTCTCCAGCAGTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCAc                                                                                   >  2:577874/1‑101 (MQ=255)
             gCTACGGCGGACATATCCCTCTTCCTGCAGCGTCTCCAGCAGTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCAc                                                                                   >  1:577873/1‑101 (MQ=255)
              cTACGGCGGACATATCCCTCTTCCTGCAGCGTCTCCAGCAGTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCAcc                                                                                  >  1:577875/1‑101 (MQ=255)
                aCGGCGGACATATCCCTCTTCCTGCAGCGTCTCCAGCAGTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGccc                                                                                              <  2:577388/87‑1 (MQ=255)
                aCGGCGGACATATCCCTCTTCCTGCAGCGTCTCCAGCAGTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGc                                                                                >  2:577877/1‑101 (MQ=255)
                  ggcggACATATCCCTCTTCCTGCAGCGTCTCCAGCAGTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTgg                                                                                      >  2:577881/1‑93 (MQ=255)
                  ggcggACATATCCCTCTTCCTGCAGCGTCTCCAGCAGTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCa                                                                              >  1:577879/1‑101 (MQ=255)
                   gcggACATATCCCTCTTCCTGCAGCGTCTCCAGCAGTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCAt                                                                             >  1:577882/1‑101 (MQ=255)
                    cggACATATCCCTCTTCCTGCAGCGTCTCCAGCAGTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATc                                                                            >  1:577883/1‑101 (MQ=255)
                     ggACATATCCCTCTTCCTGCAGCGTCTCCAGCAGTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGc                                                                                         >  2:577885/1‑87 (MQ=255)
                      gACATATCCCTCTTCCTGCAGCGTCTCCAGCAGTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCaa                                                                          >  2:577886/1‑101 (MQ=255)
                        cATATCCCTCTTCCTGCAGCGTCTCCAGCAGTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGt                                                                        >  1:577889/1‑101 (MQ=255)
                        cATATCCCTCTTCCTGCAGCGTCTCCAGCAGTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGt                                                                        >  2:577890/1‑101 (MQ=255)
                            tCCCTCTTCCTGCAGCGTCTCCAGCAGTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGtttat                                                                    <  2:577510/101‑1 (MQ=255)
                             cccTCTTCCTGCAGCGTCTCCAGCAGTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGtttatt                                                                   >  1:577893/1‑101 (MQ=255)
                             cccTCTTCCTGCAGCGTCTCCAGCAGTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGt                                                                        <  1:577312/96‑1 (MQ=255)
                              ccTCTTCCTGCAGCGTCTCCAGCAGTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGtttattt                                                                  <  1:577521/101‑1 (MQ=255)
                               ctctTCCTGCAGCGTCTCCAGCAGTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGtttattta                                                                 >  1:577894/1‑101 (MQ=255)
                                    ccTGCAGCGTCTCCAGCAGTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACata                                                            >  2:577897/1‑101 (MQ=255)
                                    ccTGCAGCGTCTCCAGCAGTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACata                                                            >  2:577896/1‑101 (MQ=255)
                                         aGCGTCTCCAGCAGTCGCCGCACAGTGGTGCGATGCAGGCTGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTtaa                                                       >  1:577899/1‑101 (MQ=255)
                                         aGCGTCTCCAGCAGTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTtaa                                                       >  2:577900/1‑101 (MQ=255)
                                          gCGTCTCCAGCAGTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTtaat                                                      >  2:577903/1‑101 (MQ=255)
                                          gCGTCTCCAGCAGTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTtaat                                                      <  1:577275/101‑1 (MQ=255)
                                           cGTCTCCAGCAGTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGcc                                                                               <  1:577151/75‑1 (MQ=255)
                                           cGTCTCCAGCAGTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTtaata                                                     <  1:577444/101‑1 (MQ=255)
                                            gTCTCCAGCAGTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTtaataa                                                    >  2:577904/1‑101 (MQ=255)
                                            gTCTCCAGCAGTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTtaataa                                                    >  2:577906/1‑101 (MQ=255)
                                             tctcCAGCAGTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAAc                                                   <  1:577404/101‑1 (MQ=255)
                                             tctcCAGCAGTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAAc                                                   <  1:577418/101‑1 (MQ=255)
                                              ctcCAGCAGTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCa                                                                              <  2:577643/73‑1 (MQ=255)
                                               tcCAGCAGTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACAt                                                 >  1:577907/1‑101 (MQ=255)
                                               tcCAGCAGTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACAt                                                 <  1:577544/101‑1 (MQ=255)
                                                ccAGCAGTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGAc                                                                                           <  2:577317/58‑1 (MQ=255)
                                                 cagcagTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTa                                               <  1:577355/101‑1 (MQ=255)
                                                 cagcagTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTa                                               >  1:577908/1‑101 (MQ=255)
                                                   gcagTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGa                                             >  1:577910/1‑101 (MQ=255)
                                                    cagTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGAc                                            <  1:577449/101‑1 (MQ=255)
                                                    cagTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGAc                                            <  1:577539/101‑1 (MQ=255)
                                                     agTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGAcc                                           >  1:577913/1‑101 (MQ=255)
                                                      gTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACcg                                          >  1:577914/1‑101 (MQ=255)
                                                        cgccgcACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACa                                                              <  2:577586/79‑1 (MQ=255)
                                                         gccgcACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCgg                                       >  2:577916/1‑101 (MQ=255)
                                                          ccgcACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGttt                                                                      <  2:577454/69‑1 (MQ=255)
                                                          ccgcACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTtaataa                                                    <  2:577430/87‑1 (MQ=255)
                                                          ccgcACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCggg                                      >  2:577917/1‑101 (MQ=255)
                                                          ccgcACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCggg                                      >  1:577918/1‑101 (MQ=255)
                                                            gcACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGa                                             <  1:577769/92‑1 (MQ=255)
                                                            gcACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCGGGtt                                    >  1:577921/1‑101 (MQ=255)
                                                               caGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCGGGTTAAg                                 >  2:577923/1‑101 (MQ=255)
                                                               caGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCGGGTTAAg                                 >  1:577922/1‑101 (MQ=255)
                                                                aGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCGGGTTAAGc                                >  1:577925/1‑101 (MQ=255)
                                                                 gtggtgCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCGGGTTAAGcc                               <  1:577632/101‑1 (MQ=255)
                                                                  tggtgCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCGGGTTAAGCcg                              >  1:577927/1‑101 (MQ=255)
                                                                    gtgCGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCGGGTTAAGCcgcg                            >  1:577928/1‑101 (MQ=255)
                                                                      gcaaTGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCGGGTTa                                   <  1:577446/89‑1 (MQ=255)
                                                                       cGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCGGGTTAAGCCGCGCAc                         >  2:577931/1‑101 (MQ=255)
                                                                       cGATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCGGGTTAAGCCGCGCAc                         >  1:577932/1‑101 (MQ=255)
                                                                        gATGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCGGGTTAAGCCGCGCACg                        >  2:577933/1‑101 (MQ=255)
                                                                          tGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAAc                                                   <  2:577340/72‑1 (MQ=255)
                                                                          tGCAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCGGGTTAAGCCGCGCACGGt                      >  1:577936/1‑101 (MQ=255)
                                                                           gCAGGCCGCTGAGTCCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACAt                                                 <  2:577390/73‑1 (MQ=255)
                                                                            cAGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCGGGTTAAGCCGCGCACGGttt                    >  1:577938/1‑101 (MQ=255)
                                                                             aGGCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCGGGTTAAGCCGCGCACGGtttt                   <  1:577477/101‑1 (MQ=255)
                                                                              ggCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCg                                                                                 <  1:577263/38‑1 (MQ=255)
                                                                               gCCGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCGGGTTAAGCCGCGCACGGTTTTGt                 >  1:577939/1‑101 (MQ=255)
                                                                                ccGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGtttatt                                                                   <  1:577565/50‑1 (MQ=255)
                                                                                ccGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCGGGTTAAGCCGCGCa                          <  2:577381/91‑1 (MQ=255)
                                                                                 cGCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCGGGTTAAGCCGCGCACGGTTTTGTAt               >  2:577940/1‑101 (MQ=255)
                                                                                  gCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCGGGTTAAGCCGCGCACGGttt                    <  2:577401/95‑1 (MQ=255)
                                                                                  gCTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCGGGTTAAGCCGCGCACGGTTTTGTAtt              >  1:577942/1‑101 (MQ=255)
                                                                                  gCTGAGTCCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCGGGTTAAGCCGCGCACGGTTTTGTAtt              <  2:577440/101‑1 (MQ=255)
                                                                                   cTGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCGGGTTAAGCCGCGCACGGTTTTGTATTc             <  1:577551/101‑1 (MQ=255)
                                                                                    tGAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCGGGTTAAGCCGCGCACGGTTTTGTATTcc            <  1:577257/101‑1 (MQ=255)
                                                                                     gAGTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCGGGTTAAGCCGCGCACGGTTTTGTATTCCg           >  2:577945/1‑101 (MQ=255)
                                                                                       gTTCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCGGGTTAAGCCGCGCACGGTTTTGTATTCCGTc         >  1:577946/1‑101 (MQ=255)
                                                                                         tCCGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCGGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTg       <  2:577552/101‑1 (MQ=255)
                                                                                          ccGCCAGTAGCCCGACGCTGGCACCGCCATCAAGtttatt                                                                   <  2:577360/40‑1 (MQ=255)
                                                                                          ccGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATAttt                                                         <  1:577162/50‑1 (MQ=255)
                                                                                          ccGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCGGGTTAAGCcgcg                            <  2:577490/79‑1 (MQ=255)
                                                                                          ccGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCGGGTTAAGCCGCGCAc                         <  2:577470/82‑1 (MQ=255)
                                                                                          ccGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCGGGTTAAGCCGCGCACGGTTTTGTATTcc            <  1:577428/95‑1 (MQ=255)
                                                                                           cGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATAttt                                                         <  1:577261/49‑1 (MQ=255)
                                                                                           cGCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCGGGTTAAGCCGCGCACGGTTTTGTATTcc            <  2:577492/94‑1 (MQ=255)
                                                                                            gCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACAt                                                 <  1:577320/56‑1 (MQ=255)
                                                                                            gCCAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCGGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTc    <  1:577426/101‑1 (MQ=255)
                                                                                             ccAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACa                                                              <  2:577452/42‑1 (MQ=255)
                                                                                             ccAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTtaat                                                      <  2:577424/50‑1 (MQ=255)
                                                                                             ccAGTAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCGGGTTAAGCCGCGCACGGTTTTGTATTCCGTc         <  1:577393/95‑1 (MQ=255)
                                                                                              cagtagCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCGGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCAt  <  2:577739/101‑1 (MQ=255)
                                                                                              cagtagCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCGGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCAt  >  1:577948/1‑101 (MQ=255)
                                                                                                 |                                                                                                 
TATCATCGGAGGGGCTACGGCGGACATATCCCTCTTCCTGCAGCGTCTCCAGCAGTCGCCGCACAGTGGTGCGATGCAGGCCGCTGAGTTCCGCCAGCAGCCCGACGCTGGCACCGCCATCAAGTTTATTTAACATATTTAATAACATTAGACCGCGGGTTAAGCCGCGCACGGTTTTGTATTCCGTCTGCTCAT  >  NC_000913/368216‑368410

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑