Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 509,589 A→G G597G (GGT→GGC copA ← Cu(+) exporting P‑type ATPase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913509,5890AG100.0% 1193.4 / NA 288G597G (GGT→GGCcopACu(+) exporting P‑type ATPase
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (142/146);  total (142/146)

Only 100 of 288 total aligned reads displayed.

CCCCTTGCGATGCCTGAGCAGTAATCTCCGCTTCGATAGCTTTGGTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGACCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCGGTAGCTGCATATCACCTGCTTTATCGAGGATCGCTCGTG  >  NC_000913/509492‑509686
                                                                                                 |                                                                                                 
 cccTTGCGATGCCTGAGCAGTAATCTCCGCTTCGATAGCTTTGGTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCtt                                                                                               <  1:795593/101‑1 (MQ=255)
  ccTTGCGATGCCTGAGCAGTAATCTCCGCTTCGATAGCTTTGGTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTc                                                                                              <  2:795483/101‑1 (MQ=255)
  ccTTGCGATGCCTGAGCAGTAATCTCCGCTTCGATAGCTTTGGTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTc                                                                                              >  2:795969/1‑101 (MQ=255)
   cTTGCGATGCCTGAGCAGTAATCTCCGCTTCGATAGCTTTGGTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCa                                                                                             <  1:795454/101‑1 (MQ=255)
     tGCGATGCCTGAGCAGTAATCTCCGCTTCGATAGCTTTGGTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGc                                                                                           <  2:795529/101‑1 (MQ=255)
     tGCGATGCCTGAGCAGTAATCTCCGCTTCGATAGCTTTGGTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGc                                                                                           >  2:795973/1‑101 (MQ=255)
        gATGCCTGAGCAGTAATCTCCGCTTCGATAGCTTTGGTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTc                                                                                        <  2:795526/101‑1 (MQ=255)
        gATGCCTGAGCAGTAATCTCCGCTTCGATAGCTTTGGTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTc                                                                                        <  2:795577/101‑1 (MQ=255)
         aTGCCTGAGCAGTAATCTCCGCTTCGATAGCTTTGGTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCa                                                                                       <  1:795596/101‑1 (MQ=255)
          tGCCTGAGCAGTAATCTCCGCTTCGATAGCTTTGGTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCAc                                                                                      <  1:795197/101‑1 (MQ=255)
          tGCCTGAGCAGTAATCTCCGCTTCGATAGCTTTGGTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCAc                                                                                      >  2:795977/1‑101 (MQ=255)
           gCCTGAGCAGTAATCTCCGCTTCGATAGCTTTGGTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCAcc                                                                                     >  1:795979/1‑101 (MQ=255)
             cTGAGCAGTAATCTCCGCTTCGATAGCTTTGGTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGc                                                                                   >  1:795982/1‑101 (MQ=255)
             cTGAGCAGTAATCTCCGCTTCGATAGCTTTGGTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGc                                                                                   <  1:795750/101‑1 (MQ=255)
              tGAGCAGTAATCTCCGCTTCGATAGCTTTGGTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCt                                                                                  <  1:795657/101‑1 (MQ=255)
               gAGCAGTAATCTCCGCTTCGATAGCTTTGGTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTc                                                                                 <  2:795496/101‑1 (MQ=255)
               gAGCAGTAATCTCCGCTTCGATAGCTTTGGTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTc                                                                                 <  1:795533/101‑1 (MQ=255)
                aGCAGTAATCTCCGCTTCGATAGCTTTGGTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCa                                                                                >  2:795984/1‑101 (MQ=255)
                aGCAGTAATCTCCGCTTCGATAGCTTTGGTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCa                                                                                >  1:795986/1‑101 (MQ=255)
                 gCAGTAATCTCCGCTTCGATAGCTTTGGTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCAc                                                                               <  2:795714/101‑1 (MQ=255)
                      aaTCTCCGCTTCGATAGCTTTGGTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCa                                                                          <  2:795583/101‑1 (MQ=255)
                      aaTCTCCGCTTCGATAGCTTTGGTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCa                                                                          >  1:795992/1‑101 (MQ=255)
                      aaTCTCCGCTTCGATAGCTTTGGTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCa                                                                          >  1:795995/1‑101 (MQ=255)
                      aaTCTCCGCTTCGATAGCTTTGGTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCa                                                                          >  2:795991/1‑101 (MQ=255)
                           ccGCTTCGATAGCTTTGGTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCcg                                                                     >  2:795999/1‑101 (MQ=255)
                            cGCTTCGATAGCTTTGGTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGcc                                                                       <  2:795597/98‑1 (MQ=255)
                             gCTTCGATAGCTTTGGTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCcgcg                                                                   >  1:796002/1‑101 (MQ=255)
                              cTTCGATAGCTTTGGTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCgcgc                                                                  >  2:796006/1‑101 (MQ=255)
                              cTTCGATAGCTTTGGTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCgcgc                                                                  >  2:796003/1‑101 (MQ=255)
                              cTTCGATAGCTTTGGTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCgcgc                                                                  <  1:795397/101‑1 (MQ=255)
                                 cGATAGCTTTGGTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAAt                                                               <  2:795733/101‑1 (MQ=255)
                                 cGATAGCTTTGGTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAAt                                                               >  2:796010/1‑101 (MQ=255)
                                  gATAGCTTTGGTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAAtg                                                              >  1:796011/1‑101 (MQ=255)
                                    tAGCTTTGGTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAAtgtg                                                            <  1:795349/101‑1 (MQ=255)
                                    tAGCTTTGGTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAAtgtg                                                            >  1:796015/1‑101 (MQ=255)
                                    tAGCTTTGGTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAAtgtg                                                            <  1:795470/101‑1 (MQ=255)
                                     aGCTTTGGTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGc                                                           >  2:796019/1‑101 (MQ=255)
                                     aGCTTTGGTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGc                                                           <  2:795620/101‑1 (MQ=255)
                                     aGCTTTGGTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGc                                                           <  2:795675/101‑1 (MQ=255)
                                      gCTTTGGTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCg                                                          <  2:795861/101‑1 (MQ=255)
                                        tttGGTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGa                                                        >  1:796022/1‑101 (MQ=255)
                                          tGGTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAAtgt                                                             >  1:796025/1‑94 (MQ=255)
                                           ggTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAAc                                                     <  1:795550/101‑1 (MQ=255)
                                           ggTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAAc                                                     <  2:795641/101‑1 (MQ=255)
                                            gTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAAcc                                                    >  1:796028/1‑101 (MQ=255)
                                             tACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCg                                                   >  2:796029/1‑101 (MQ=255)
                                               ccAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGtt                                                 >  2:796033/1‑101 (MQ=255)
                                               ccAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGtt                                                 <  2:795557/101‑1 (MQ=255)
                                                cAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTg                                                >  1:796037/1‑101 (MQ=255)
                                                 aaCCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGa                                               >  2:796038/1‑101 (MQ=255)
                                                   ccTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGAcc                                             >  1:796042/1‑101 (MQ=255)
                                                    cTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCt                                            <  2:795685/101‑1 (MQ=255)
                                                    cTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCt                                            >  2:796043/1‑101 (MQ=255)
                                                    cTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCt                                            <  1:795953/101‑1 (MQ=255)
                                                      gTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGc                                          >  1:796048/1‑101 (MQ=255)
                                                       ttGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCg                                         >  1:796052/1‑101 (MQ=255)
                                                       ttGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCg                                         <  2:795666/101‑1 (MQ=255)
                                                       ttGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCg                                         >  2:796050/1‑101 (MQ=255)
                                                           tCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCGGTAg                                     >  1:796057/1‑101 (MQ=255)
                                                            cATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCGGTAGc                                    >  2:796062/1‑101 (MQ=255)
                                                            cATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCGGTAGc                                    >  1:796061/1‑101 (MQ=255)
                                                              tttAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCGGTAGCTg                                  <  2:795513/101‑1 (MQ=255)
                                                              tttAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCGGTAGCTg                                  >  2:796066/1‑101 (MQ=255)
                                                              tttAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCGGTAGCTg                                  <  1:795740/101‑1 (MQ=255)
                                                               ttAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCGGTAGCTGc                                 >  1:796067/1‑101 (MQ=255)
                                                                tAACAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCGGTAGCTGCa                                <  2:795823/101‑1 (MQ=255)
                                                                 aaCAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCGGTAGCTGCat                               >  1:796070/1‑101 (MQ=255)
                                                                   cAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCGGTAGCTGCatat                             >  2:796075/1‑101 (MQ=255)
                                                                   cAGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCGGTAGCTGCatat                             >  1:796076/1‑101 (MQ=255)
                                                                    aGCGCCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCGGTAGCTGCATATc                            <  2:795653/101‑1 (MQ=255)
                                                                       gcCTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCGGTAGCTGCATATCAcc                         >  2:796080/1‑101 (MQ=255)
                                                                        ccTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCGGTAGCTGCATATCACCt                        >  1:796083/1‑101 (MQ=255)
                                                                        ccTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCGGTAGCTGCATATCACCt                        <  2:795757/101‑1 (MQ=255)
                                                                         cTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCGGTAGCTGCATATCACCTg                       >  2:796085/1‑101 (MQ=255)
                                                                         cTGATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCGGTAGCTGCATATCACCTg                       <  2:795567/101‑1 (MQ=255)
                                                                           gATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCGGTAGCTGCATATCACCTGCt                     <  2:795696/101‑1 (MQ=255)
                                                                           gATTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCGGTAGCTGCATATCACCTGCt                     >  2:796089/1‑101 (MQ=255)
                                                                            aTTGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCGGTAGCTGCATATCACCTGCtt                    >  1:796090/1‑101 (MQ=255)
                                                                              tGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCGGTAGCTGCATATCACCTGCTTTa                  >  2:796095/1‑101 (MQ=255)
                                                                              tGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCGGTAGCTGCATATCACCTGCTTTa                  <  1:795726/101‑1 (MQ=255)
                                                                              tGCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCGGTAGCTGCATATCACCTGCTTTa                  <  1:795618/101‑1 (MQ=255)
                                                                               gCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCGGTAGCTGCATATCACCTGCTTTAt                 <  1:795793/101‑1 (MQ=255)
                                                                               gCCCAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCGGTAGCTGCATATCACCTGCTTTAt                 <  2:795818/101‑1 (MQ=255)
                                                                                 ccAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCGGTAGCTGCATATCACCTGCTTTATCg               <  1:795705/101‑1 (MQ=255)
                                                                                 ccAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCGGTAGCTGCATATCACCTGCTTTATCg               >  1:796097/1‑101 (MQ=255)
                                                                                 ccAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCGGTAGCTGCATATCACCTGCTTTATCg               <  2:795721/101‑1 (MQ=255)
                                                                                  cAGCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCGGTAGCTGCATATCACCTGCTTTATCGa              <  2:795607/101‑1 (MQ=255)
                                                                                    gCAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCGGTAGCTGCATATCACCTGCTTTATCGAgg            <  1:795640/101‑1 (MQ=255)
                                                                                     cAATAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCGGTAGCTGCATATCACCTGCTTTATCGAGGa           >  2:796101/1‑101 (MQ=255)
                                                                                      aaTAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCGGTAGCTGCATATCACCTGCTTTATCGAGGAt          >  1:796102/1‑101 (MQ=255)
                                                                                      aaTAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCGGTAGCTGCATATCACCTGCTTTATCGAGGAt          <  2:795629/101‑1 (MQ=255)
                                                                                       aTAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCGGTAGCTGCATATCACCTGCTTTATCGAGGATc         <  1:795580/101‑1 (MQ=255)
                                                                                       aTAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCGGTAGCTGCATATCACCTGCTTTATCGAGGATc         <  2:795647/101‑1 (MQ=255)
                                                                                        tAACGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCGGTAGCTGCATATCACCTGCTTTATc                >  2:796106/1‑93 (MQ=255)
                                                                                         aaCGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCGGTAGCTGCATATCACCTGCTTTATCGAGGATCGc       <  1:795625/101‑1 (MQ=255)
                                                                                          aCGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCGGTAGCTGCATATCACCTGCTTTATCGAGGATCGCt      <  1:795843/101‑1 (MQ=255)
                                                                                           cGCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCGGTAGCTGCATATCACCTGCTTTATCGAGGATCGCTc     <  2:795939/101‑1 (MQ=255)
                                                                                            gCATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCGGTAGCTGCATATCACCTGCTTTATCGAGGATCGCTCg    <  1:795679/101‑1 (MQ=255)
                                                                                             cATGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCGGTAGCTGCATATCACCTGCTTTATCGAGGATCGCTCGt   <  2:795789/101‑1 (MQ=255)
                                                                                              aTGGCCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCGGTAGCTGCATATCACCTGCTTTATCGAGGATCGCTCg    >  1:796110/1‑99 (MQ=255)
                                                                                                 |                                                                                                 
CCCCTTGCGATGCCTGAGCAGTAATCTCCGCTTCGATAGCTTTGGTACCAACCTGTTGCTCATTTAACAGCGCCTGATTGCCCAGCAATAACGCATGACCTTCAGCTTCACCGCTCACGCCCAGCCCGCGCAATGTGCGGAAACCGTTGACCTGCGGTAGCTGCATATCACCTGCTTTATCGAGGATCGCTCGTG  >  NC_000913/509492‑509686

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: