BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,001,758	A→G	E848G (GAG→GGG)	elfC →	putative fimbrial usher protein ElfC

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,001,758	0	A	G	100.0%	1146.9 / NA	275	E848G (GAG→GGG)	elfC	putative fimbrial usher protein ElfC
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (133/142); total (133/142)

Only 100 of 275 total aligned reads displayed.

ATGATGATGGCTCGCTCTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCTCCCGATCAAATTTGTCATATCAATTACGAGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTT  >  NC_000913/1001659‑1001855

atgatgatgGCTCGCTCTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGc                                                                                                 >  1:1545110/1‑101 (MQ=255)

  gatgatgGCTCGCTCTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCtt                                                                                               >  1:1545112/1‑101 (MQ=255)

  gatgatgGCTCGCTCTACATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCtt                                                                                               <  1:1544502/101‑1 (MQ=255)

   atgatgGCTCGCTCTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTa                                                                                              <  2:1544711/101‑1 (MQ=255)

       tgGCTCGCTCTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGa                                                                                          >  1:1545117/1‑101 (MQ=255)

        ggCTCGCTCTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGaa                                                                                         <  2:1544611/101‑1 (MQ=255)

        ggCTCGCTCTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGaa                                                                                         <  1:1544718/101‑1 (MQ=255)

           tcgctcTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGaacaa                                                                                      >  1:1545120/1‑101 (MQ=255)

              ctctATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAAcaacaa                                                                                   >  1:1545125/1‑101 (MQ=255)

                ctATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAAt                                                                                 <  2:1544704/101‑1 (MQ=255)

                ctATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAAt                                                                                 >  1:1545127/1‑101 (MQ=255)

                 tataTGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAAtt                                                                                >  1:1545130/1‑101 (MQ=255)

                  atatGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTa                                                                               >  2:1545135/1‑101 (MQ=255)

                  atatGGCGGGTTTACCGGCGAAGGGAACAAAAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTa                                                                               >  2:1545132/1‑101 (MQ=255)

                    atGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAAcaacaa                                                                                   >  1:1545137/1‑95 (MQ=255)

                    atGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAAc                                                                             <  2:1544590/101‑1 (MQ=255)

                     tGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAAct                                                                            <  2:1544741/101‑1 (MQ=255)

                       gCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAAt                                                                                 <  2:1544797/94‑1 (MQ=255)

                       gCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAActct                                                                          <  1:1544688/101‑1 (MQ=255)

                        cGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTg                                                                         <  1:1544752/101‑1 (MQ=255)

                        cGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTg                                                                         <  2:1544574/101‑1 (MQ=255)

                        cGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTg                                                                         <  1:1544578/101‑1 (MQ=255)

                          ggTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCg                                                                       <  2:1544893/101‑1 (MQ=255)

                          ggTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCg                                                                       >  1:1545141/1‑101 (MQ=255)

                             ttACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGAtt                                                                    >  1:1545144/1‑101 (MQ=255)

                             ttACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGAtt                                                                    <  1:1544828/101‑1 (MQ=255)

                              tACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTa                                                                   <  1:1544551/101‑1 (MQ=255)

                                ccGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTAcg                                                                 >  2:1545147/1‑101 (MQ=255)

                                ccGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTAcg                                                                 >  1:1545148/1‑101 (MQ=255)

                                  ggCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTAcgcg                                                               <  1:1544757/101‑1 (MQ=255)

                                  ggCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTAcgcg                                                               >  1:1545152/1‑101 (MQ=255)

                                   gCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGa                                                              <  2:1544623/101‑1 (MQ=255)

                                    cGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGaa                                                             >  2:1545156/1‑101 (MQ=255)

                                     gAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAAt                                                            >  2:1545160/1‑101 (MQ=255)

                                     gAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAAt                                                            <  1:1544603/101‑1 (MQ=255)

                                     gAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAAt                                                            >  1:1545159/1‑101 (MQ=255)

                                      aaGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATg                                                           >  2:1545163/1‑101 (MQ=255)

                                       aGGGAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATgg                                                          >  1:1545165/1‑101 (MQ=255)

                                        gggAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGa                                                         <  2:1544676/101‑1 (MQ=255)

                                        gggAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGa                                                         <  2:1544836/101‑1 (MQ=255)

                                         ggAACAATAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGAt                                                        <  2:1544817/101‑1 (MQ=255)

                                              aaTAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCat                                                   >  2:1545169/1‑101 (MQ=255)

                                               aTAAGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCata                                                  >  1:1545172/1‑101 (MQ=255)

                                                  aGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGc                                               <  1:1544810/101‑1 (MQ=255)

                                                  aGCGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGc                                               >  2:1545175/1‑101 (MQ=255)

                                                    cGTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAg                                             <  2:1544616/101‑1 (MQ=255)

                                                     gTGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGa                                            >  1:1545179/1‑101 (MQ=255)

                                                      tGCGCTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGAt                                           >  2:1545180/1‑101 (MQ=255)

                                                         gcTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAAt                                        <  1:1544862/101‑1 (MQ=255)

                                                         gcTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAAt                                        <  2:1544636/101‑1 (MQ=255)

                                                         gcTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAAt                                        >  2:1545183/1‑101 (MQ=255)

                                                         gcTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAAt                                        <  2:1544774/101‑1 (MQ=255)

                                                          cTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATc                                       <  2:1544861/101‑1 (MQ=255)

                                                          cTGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATc                                       <  1:1544743/101‑1 (MQ=255)

                                                           tGGGGCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCt                                      >  1:1545188/1‑101 (MQ=255)

                                                            ggggCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCtt                                     >  2:1545189/1‑101 (MQ=255)

                                                             gggCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCttt                                    >  1:1545194/1‑101 (MQ=255)

                                                             gggCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCttt                                    >  2:1545192/1‑101 (MQ=255)

                                                             gggCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCttt                                    <  1:1544735/101‑1 (MQ=255)

                                                              ggCGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTg                                   <  2:1544841/101‑1 (MQ=255)

                                                                cGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGga                                 <  2:1544699/101‑1 (MQ=255)

                                                                cGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGga                                 <  1:1544647/101‑1 (MQ=255)

                                                                cGAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGga                                 <  1:1544663/101‑1 (MQ=255)

                                                                 gAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGgag                                >  2:1545201/1‑101 (MQ=255)

                                                                 gAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGgag                                <  1:1544821/101‑1 (MQ=255)

                                                                 gAAGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGCATGCCATATGCAGATAATCTTTGgag                                >  1:1545198/1‑101 (MQ=255)

                                                                  aaGCT‑CCGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGgaga                               >  1:1545203/1‑101 (MQ=255)

                                                                    agctccGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGaa                              >  2:1545205/5‑101 (MQ=255)

                                                                      ctccGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGaaaa                            <  2:1544727/99‑1 (MQ=255)

                                                                      ctccGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGaaaa                            <  1:1545034/99‑1 (MQ=255)

                                                                       tccGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGaaaaa                           <  1:1544881/100‑1 (MQ=255)

                                                                       tccGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGaaaaa                           >  1:1545209/2‑101 (MQ=255)

                                                                        ccGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAAt                          >  2:1545213/1‑101 (MQ=255)

                                                                        ccGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAAt                          <  2:1544756/101‑1 (MQ=255)

                                                                        ccGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAAt                          >  1:1545212/1‑101 (MQ=255)

                                                                         cGATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAAt                          <  1:1544721/100‑1 (MQ=255)

                                                                          gATCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGc                        >  2:1545217/1‑101 (MQ=255)

                                                                           aTCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTgg                                  <  1:1545013/90‑1 (MQ=255)

                                                                           aTCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCg                       >  1:1545219/1‑101 (MQ=255)

                                                                           aTCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCg                       <  2:1544664/101‑1 (MQ=255)

                                                                            tCAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCgt                      <  1:1544700/101‑1 (MQ=255)

                                                                             cAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCgtg                     <  2:1544852/101‑1 (MQ=255)

                                                                             cAAATTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCgtg                     >  1:1545223/1‑101 (MQ=255)

                                                                              aaaTTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCgtgt                    <  2:1544764/101‑1 (MQ=255)

                                                                              aaaTTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCgtgt                    <  1:1544942/101‑1 (MQ=255)

                                                                                aTTTGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAAt                                                            >  1:1545226/1‑59 (MQ=255)

                                                                                 tttGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCAt                 <  2:1544999/101‑1 (MQ=255)

                                                                                 tttGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCAt                 <  1:1544899/101‑1 (MQ=255)

                                                                                  ttGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCAtt                <  2:1544909/101‑1 (MQ=255)

                                                                                   tGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATta               >  2:1545230/1‑101 (MQ=255)

                                                                                   tGTCATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATta               >  1:1545229/1‑101 (MQ=255)

                                                                                      cATATCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATtacta            <  2:1544747/101‑1 (MQ=255)

                                                                                       atatCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATtactac           >  1:1545233/1‑101 (MQ=255)

                                                                                        tatCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACg          <  1:1544639/101‑1 (MQ=255)

                                                                                         atCAATTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGa         >  2:1545237/1‑101 (MQ=255)

                                                                                            aaTTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTa      <  2:1544806/101‑1 (MQ=255)

                                                                                             aTTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTAt     >  1:1545240/1‑101 (MQ=255)

                                                                                             aTTACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTAt     >  2:1545241/1‑101 (MQ=255)

                                                                                               tACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTAttt   <  2:1544955/101‑1 (MQ=255)

                                                                                               tACGGGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTAttt   >  2:1545245/1‑101 (MQ=255)

ATGATGATGGCTCGCTCTATATGGCGGGTTTACCGGCGAAGGGAACAATAAGCGTGCGCTGGGGCGAAGCTCCCGATCAAATTTGTCATATCAATTACGAGCTTACCGAACAACAAATTAACTCTGCGATTACGCGAATGGATGCCATATGCAGATAATCTTTGGAGAAAAATGCGTGTCATTACTACGACTATTTT  >  NC_000913/1001659‑1001855

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`