Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 1,954,493 A→G intergenic (+80/+85) cmoB → / ← torZ tRNA U34 carboxymethyltransferase/trimethylamine N‑oxide reductase 2

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009131,954,4930AG100.0% 1203.8 / NA 286intergenic (+80/+85)cmoB/torZtRNA U34 carboxymethyltransferase/trimethylamine N‑oxide reductase 2
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (145/141);  total (145/141)

Only 100 of 286 total aligned reads displayed.

ATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGACTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAAC  >  NC_000913/1954396‑1954589
                                                                                                 |                                                                                                
aTTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTa                                                                                               >  2:2967157/1‑101 (MQ=255)
    cgcgcAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTa                                                                                           >  1:2967160/1‑101 (MQ=255)
     gcgcAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAg                                                                                          >  2:2967163/1‑101 (MQ=255)
       gcAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGc                                                                                        >  2:2967166/1‑101 (MQ=255)
        cAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGcc                                                                                       >  1:2967168/1‑101 (MQ=255)
        aaaGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCt                                                                                                <  2:2966697/91‑1 (MQ=255)
         aaGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCt                                                                                                <  1:2966814/91‑1 (MQ=255)
         aaGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTa                                                                                               <  1:2966637/92‑1 (MQ=255)
         aaGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTAt                                                                                              <  2:2966809/93‑1 (MQ=255)
         aaGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATg                                                                                             <  2:2966831/94‑1 (MQ=255)
         aaGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGt                                                                                            <  1:2966659/95‑1 (MQ=255)
         aaGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAgg                                                                                         <  1:2966585/98‑1 (MQ=255)
         aaGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAg                                                                                          <  2:2966583/97‑1 (MQ=255)
         aaGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGc                                                                                        <  2:2966711/99‑1 (MQ=255)
         aaGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCt                                                                                      >  2:2967171/1‑101 (MQ=255)
         aaGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCt                                                                                      >  1:2967175/1‑101 (MQ=255)
          aGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTg                                                                                     <  1:2966647/101‑1 (MQ=255)
          aGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTg                                                                                     >  2:2967176/1‑101 (MQ=255)
          aGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTg                                                                                     <  1:2966791/101‑1 (MQ=255)
          aGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTg                                                                                     <  1:2966955/101‑1 (MQ=255)
           gCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGa                                                                                    <  1:2966756/101‑1 (MQ=255)
              gTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATaa                                                                                 >  2:2967181/1‑101 (MQ=255)
               tAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAg                                                                                <  1:2966874/101‑1 (MQ=255)
                 aaGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCa                                                                              >  2:2967184/1‑101 (MQ=255)
                 aaGGTCTGGNATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCa                                                                              >  1:2967183/1‑101 (MQ=255)
                   ggTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATa                                                                            <  1:2966686/101‑1 (MQ=255)
                    gTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAg                                                                           >  1:2967189/1‑101 (MQ=255)
                    gTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAg                                                                           <  1:2966770/101‑1 (MQ=255)
                     tCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAgc                                                                          <  1:2966562/101‑1 (MQ=255)
                     tCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAgc                                                                          <  1:2966606/101‑1 (MQ=255)
                      cTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAgcg                                                                         >  2:2967191/1‑101 (MQ=255)
                       tGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAgcgc                                                                        >  1:2967192/1‑101 (MQ=255)
                        ggTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCa                                                                       <  1:2966728/101‑1 (MQ=255)
                         gTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCAt                                                                      <  2:2966822/101‑1 (MQ=255)
                         gTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCAt                                                                      <  1:2966672/101‑1 (MQ=255)
                          tATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATc                                                                     >  1:2967196/1‑101 (MQ=255)
                           aTTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCa                                                                    <  2:2966661/101‑1 (MQ=255)
                            ttACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAg                                                                   <  2:2966478/101‑1 (MQ=255)
                              aCTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGc                                                                 >  2:2967198/1‑101 (MQ=255)
                                 gCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGc                                                              <  2:2966598/101‑1 (MQ=255)
                                 gCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGc                                                              <  1:2966761/101‑1 (MQ=255)
                                   cGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCtt                                                            <  2:2966871/101‑1 (MQ=255)
                                    ggATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCttt                                                           >  2:2967203/1‑101 (MQ=255)
                                     gATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTa                                                          <  2:2966877/101‑1 (MQ=255)
                                      aTGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTAc                                                         >  1:2967205/1‑101 (MQ=255)
                                        gcggcgTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGt                                                       <  2:2966622/101‑1 (MQ=255)
                                          ggcgTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGttt                                                     <  2:2966675/101‑1 (MQ=255)
                                          ggcgTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGttt                                                     >  2:2967209/1‑101 (MQ=255)
                                           gcgTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTg                                                    <  2:2967036/101‑1 (MQ=255)
                                             gTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCa                                                  <  1:2966996/101‑1 (MQ=255)
                                              tGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCAt                                                 <  1:2966496/101‑1 (MQ=255)
                                              tGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCAt                                                 >  1:2967211/1‑101 (MQ=255)
                                                aaCGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATaa                                               >  2:2967215/1‑101 (MQ=255)
                                                   gCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCt                                            >  2:2967219/1‑101 (MQ=255)
                                                   gCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCt                                            >  1:2967221/1‑101 (MQ=255)
                                                    ccTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTc                                           <  2:2966638/101‑1 (MQ=255)
                                                    ccTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTc                                           >  2:2967222/1‑101 (MQ=255)
                                                    ccTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTc                                           <  2:2966769/101‑1 (MQ=255)
                                                    ccTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTc                                           <  2:2966856/101‑1 (MQ=255)
                                                     cTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCa                                          <  2:2966685/101‑1 (MQ=255)
                                                     cTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCa                                          <  1:2966666/101‑1 (MQ=255)
                                                      ttATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAg                                         <  1:2966369/101‑1 (MQ=255)
                                                      ttATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAg                                         <  2:2966750/101‑1 (MQ=255)
                                                        aTCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTc                                           >  1:2967227/1‑97 (MQ=255)
                                                        aTCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAgcg                                       <  2:2966778/101‑1 (MQ=255)
                                                         tCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAgcgc                                      >  2:2967228/1‑101 (MQ=255)
                                                         tCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAgcgc                                      <  1:2966745/101‑1 (MQ=255)
                                                         tCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAgcgc                                      <  1:2967016/101‑1 (MQ=255)
                                                             gCCTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGt                                  >  2:2967231/1‑101 (MQ=255)
                                                              ccTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGtt                                 >  2:2967234/1‑101 (MQ=255)
                                                               cTACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGttt                                >  2:2967237/1‑101 (MQ=255)
                                                                tACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTc                               <  2:2966943/101‑1 (MQ=255)
                                                                tACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTc                               >  2:2967243/1‑101 (MQ=255)
                                                                tACAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTc                               >  1:2967242/1‑101 (MQ=255)
                                                                 aCAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTcc                              <  2:2966789/101‑1 (MQ=255)
                                                                  cAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCg                             <  2:2967007/101‑1 (MQ=255)
                                                                  cAAAACCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCg                             >  2:2967246/1‑101 (MQ=255)
                                                                   aaaaCCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCgg                            >  2:2967248/1‑101 (MQ=255)
                                                                   aaaaCCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCgg                            <  2:2966921/101‑1 (MQ=255)
                                                                    aaaCCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCggg                           >  1:2967252/1‑101 (MQ=255)
                                                                      aCCTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGgcg                         >  2:2967255/1‑101 (MQ=255)
                                                                        cTTGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCt                       >  1:2967256/1‑101 (MQ=255)
                                                                         ttGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTa                      >  1:2967261/1‑101 (MQ=255)
                                                                          tGCTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTAt                     >  1:2967264/1‑101 (MQ=255)
                                                                            cTAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTc                   >  2:2967266/1‑101 (MQ=255)
                                                                             tAATTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCa                  >  1:2967268/1‑101 (MQ=255)
                                                                              aaTTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCg                             >  1:2967273/1‑89 (MQ=255)
                                                                               aTTCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACg                <  1:2966979/101‑1 (MQ=255)
                                                                                 tCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTc              >  1:2967278/1‑101 (MQ=255)
                                                                                 tCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTc              >  1:2967276/1‑101 (MQ=255)
                                                                                 tCAATATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTc              >  2:2967279/1‑101 (MQ=255)
                                                                                   aaTATATTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCtt            >  2:2967283/1‑101 (MQ=255)
                                                                                    atatatTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTa           <  1:2966707/101‑1 (MQ=255)
                                                                                     tatatTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTAc          >  1:2967287/1‑101 (MQ=255)
                                                                                       tatTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGc        >  1:2967290/1‑101 (MQ=255)
                                                                                       tatTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGc        >  2:2967291/1‑101 (MQ=255)
                                                                                        atTGCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGcc       >  1:2967296/1‑101 (MQ=255)
                                                                                           gCAGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGa    >  2:2967299/1‑101 (MQ=255)
                                                                                             aGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAAc  <  2:2966799/101‑1 (MQ=255)
                                                                                             aGGGGCTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAAc  >  1:2967302/1‑101 (MQ=255)
                                                                                                 |                                                                                                
ATTGCGCGCAAGCCGTAAAGGTCTGGTATTACTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAACCTTGCTAATTCAATATATTGCAGGGACTATGTAGGCCTGATAAGCATAGCGCATCAGGCAGCTTTACGTTTGCATAACCTCAGCGCCCGTTTCCGGGCGCTATTCACGTCTTACGCCTGAAC  >  NC_000913/1954396‑1954589

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: