| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,219,201 | T→C | N94S (AAC→AGC) | osmF ← | glycine betaine ABC transporter periplasmic binding protein OsmF |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,219,201 | 0 | T | C | 99.7% | 1293.5 / NA | 318 | N94S (AAC→AGC) | osmF | glycine betaine ABC transporter periplasmic binding protein OsmF |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (160/157); minor base A (1/0); total (161/157) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 326 total aligned reads displayed.
TTGCAGGCGCGGGCGTCAGCCAGATTAACTTGTTGTGCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGTTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGGATAGATATCCAGTTCACCGGAAGTAATCGCCCCGCGCACCACAGGAGTCGTTCC > NC_000913/2219103‑2219298 | tGCAGGCGCGGGCGTCAGCCAGATTAACTTGTTGTGCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGcttt < 2:3371369/101‑1 (MQ=255) tGCAGGCGCGGGCGTCAGCCAGATTAACTTGTTGTGCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGcttt < 2:3371017/101‑1 (MQ=255) cAGGCGCGGGCGTCAGCCAGATTAACTTGTTGTGCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCa < 1:3371188/101‑1 (MQ=255) cgcgGGCGTCAGCCAGATTAACTTGTTGTGCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCtt > 2:3371699/1‑101 (MQ=255) cgcgGGCGTCAGCCAGATTAACTTGTTGTGCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCtt > 1:3371701/1‑101 (MQ=255) gcgGGCGTCAGCCAGATTAACTTGTTGTGCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCttt > 1:3371704/1‑101 (MQ=255) gcgGGCGTCAGCCAGATTAACTTGTTGTGCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCttt < 1:3371240/101‑1 (MQ=255) gcgGGCGTCAGCCAGATTAACTTGTTGTGCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCttt < 1:3371423/101‑1 (MQ=255) cgGGCGTCAGCCAGATTAACTTGTTGTGCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTa > 2:3371707/1‑101 (MQ=255) cgGGCGTCAGCCAGATTAACTTGTTGTGCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTa < 2:3371299/101‑1 (MQ=255) cgGGCGTCAGCCAGATTAACTTGTTGTGCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTa < 1:3371163/101‑1 (MQ=255) gggCGTCAGCCAGATTAACTTGTTGTGCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTaa > 1:3371709/1‑101 (MQ=255) gggCGTCAGCCAGATTAACTTGTTGTGCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTaa < 1:3371319/101‑1 (MQ=255) ggCGTCAGCCAGATTAACTTGTTGTGCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTaaa < 1:3371411/101‑1 (MQ=255) cGTCAGCCAGATTAACTTGTTGTGCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAaaga < 1:3370974/101‑1 (MQ=255) gTCAGCCAGATTAACTTGTTGTGCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAaagaa < 1:3371374/101‑1 (MQ=255) gTCAGCCAGATTAACTTGTTGTGCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAaagaa < 1:3371043/101‑1 (MQ=255) gTCAGCCAGATTAACTTGTTGTGCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAaagaa > 1:3371714/1‑101 (MQ=255) cAGCCAGATTAACTTGTTGTGCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAagaaga < 2:3371237/101‑1 (MQ=255) aGCCAGATTAACTTGTTGTGCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAgaagaa > 1:3371718/1‑101 (MQ=255) gCCAGATTAACTTGTTGTGCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGaaa > 2:3371720/1‑101 (MQ=255) gCCAGATTAACTTGTTGTGCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGaaa < 2:3371402/101‑1 (MQ=255) ccAGATTAACTTGTTGTGCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAg < 2:3371284/101‑1 (MQ=255) ccAGATTAACTTGTTGTGCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAg < 2:3370946/101‑1 (MQ=255) ccAGATTAACTTGTTGTGCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAg < 1:3371205/101‑1 (MQ=255) aGATTAACTTGTTGTGCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAgcg > 1:3371724/1‑101 (MQ=255) aTTAACTTGTTGTGCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGcc > 2:3371728/1‑101 (MQ=255) tAACTTGTTGTGCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCAt > 1:3371730/1‑101 (MQ=255) aaCTTGTTGTGCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCAtt < 2:3371213/101‑1 (MQ=255) cTTGTTGTGCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAaagaag > 1:3371735/1‑88 (MQ=255) ttgttgTGCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGcc > 2:3371737/1‑101 (MQ=255) tgttgtGCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCg > 1:3371740/1‑101 (MQ=255) gttgtGCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCgg < 1:3371140/101‑1 (MQ=255) gttgtGCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCgg < 2:3371437/101‑1 (MQ=255) gttgtGCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCgg < 1:3371450/101‑1 (MQ=255) ttgtGCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGt > 1:3371745/1‑101 (MQ=255) ttgtGCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGt > 2:3371743/1‑101 (MQ=255) gtgCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGtat < 1:3371157/101‑1 (MQ=255) gtgCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGtat > 2:3371751/1‑101 (MQ=255) gtgCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGtat > 1:3371752/1‑101 (MQ=255) tgCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGtata < 1:3371214/101‑1 (MQ=255) tgCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGtata < 1:3371281/101‑1 (MQ=255) tgCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGtata < 2:3371384/101‑1 (MQ=255) tgCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGtata < 2:3371155/101‑1 (MQ=255) gCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTatat > 2:3371755/1‑101 (MQ=255) cTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATAtt < 1:3371250/101‑1 (MQ=255) tCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTc < 1:3371334/101‑1 (MQ=255) tCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTc > 2:3371758/1‑101 (MQ=255) cGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCg > 2:3371762/1‑101 (MQ=255) gAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCgg < 2:3371190/101‑1 (MQ=255) aTCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGgat > 1:3371768/1‑101 (MQ=255) tCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGgata < 2:3371418/101‑1 (MQ=255) tCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGgata > 2:3371769/1‑101 (MQ=255) gAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGGCGGTATATTCCGgataga < 1:3371354/101‑1 (MQ=255) gAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGgataga > 2:3371774/1‑101 (MQ=255) gAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGgat > 1:3371775/1‑98 (MQ=255) gCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAaagaag < 2:3371321/68‑1 (MQ=255) gCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGgatagata > 1:3371780/1‑101 (MQ=255) gCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGgatagata < 2:3371243/101‑1 (MQ=255) tttttGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAgcg > 1:3371784/1‑72 (MQ=255) tttttGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGGATAGATATc > 2:3371782/1‑101 (MQ=255) ttttGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGGATAGATATcc < 2:3371515/101‑1 (MQ=255) gACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGGATAGATATCCAGtt > 1:3371790/1‑101 (MQ=255) aCTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGGATAGATATCCAGTTc < 2:3371228/101‑1 (MQ=255) tttCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGATTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGGATAGATATCCAGTTCAc > 2:3371793/1‑101 (MQ=255) tctcGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGGATAGATATCCAGTTCACCg < 2:3371474/101‑1 (MQ=255) ctcGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGGATAGATATCCAGTTCACCgg < 2:3371264/101‑1 (MQ=255) ctcGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGGATAGATATCCAGTTCACCgg < 2:3371030/101‑1 (MQ=255) ctcGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGGATAGATATCCAGTTCACCgg < 1:3371100/101‑1 (MQ=255) tcGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGGATAGATATCCAGTTCACCGGa > 1:3371798/1‑101 (MQ=255) cGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGGATAGATATCCAGTTCACCGGaa > 2:3371799/1‑101 (MQ=255) tAACCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGGATAGATATCCAGTTCACCGGAAGt < 1:3371473/101‑1 (MQ=255) aaCCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGGATAGATATCCAGTTCACCGGAAGTa > 2:3371804/1‑101 (MQ=255) aaCCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGGATAGATATCCAGTTCACCGGAAGTa > 1:3371805/1‑101 (MQ=255) aCCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGGATAGATATCCAGTTCACCGGAAGTaa > 2:3371809/1‑101 (MQ=255) aCCTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGGATAGATATCCAGTTCACCGGAAGTaa < 2:3371175/101‑1 (MQ=255) ccTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGGATAGATATCCAGTTCACCg > 2:3371813/1‑93 (MQ=255) ccTTGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGGATAGATATCCAGTTCACCGGAAGTAAt < 1:3370783/101‑1 (MQ=255) ttGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGGATAGATATCCAGTTCACCGGAAGt < 1:3371311/96‑1 (MQ=255) ttGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGGATAGATATCCAGTTCACCGGAAGTAATCg > 1:3371816/1‑101 (MQ=255) ttGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGGATAGATATCCAGTTCACCGGAAGTAATCg < 1:3371301/101‑1 (MQ=255) ttGCTGCGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGGATAGATATCCAGTTCACCGGAAGTAATCg < 2:3371260/101‑1 (MQ=255) ctgcGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGGATAGATATCCAGTTCACCGGAAGTAATCGccc > 1:3371821/1‑101 (MQ=255) tgcGCGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGGATAGATATCCAGTTCACCGGAAg > 2:3371824/1‑91 (MQ=255) gcgcGTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGGATAGATATCCAGTTCACCGGAAGTAATCGCCCcg < 2:3371304/101‑1 (MQ=255) gcgTTTTTCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGGATAGATATCCAGTTCACCGGAAGTAATCGCCCcgcg > 2:3371827/1‑101 (MQ=255) ttttCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGGATAGATATCCAGTTCACCGGAAGTAATCGCCCCGCGcacc > 2:3371830/1‑101 (MQ=255) ttCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGGATAGATATCCAGTTCACCGGAAGTAATCGCCCCGCGcaccac > 1:3371832/1‑101 (MQ=255) tCCACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGGATAGATATCCAGTTCACCGGAAGTAATCGCCCCGCGCACcaca > 2:3371834/1‑101 (MQ=255) cACGCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGGATAGATATCCAGTTCACCGGAAGTAATCGCCCCGCGCACCACAgg > 1:3371837/1‑101 (MQ=255) gCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGGATAGATATCCAGTTCACCGGAAGTAATCGCCCCGCGCACCACAGGAGt > 1:3371844/1‑101 (MQ=255) gCTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGGATAGATATCCAGTTCACCGGAAGTAATCGCCCCGCGCACCACAGGAGt > 2:3371843/1‑101 (MQ=255) cTGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGGATAGATATCCAGTTCACCGGAAGTAATCGCCCCGCGCACCACAGGAGTc < 2:3371353/101‑1 (MQ=255) tGCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGGATAGATATCCAGTTCACCGGAAGTAATCGCCCCGCGCACCACAGGAGTCg < 1:3371486/101‑1 (MQ=255) gCATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGGATAGATATCCAGTTCACCGGAAGTAATCGCCCCGCGCACCACAGGAGTCGt > 2:3371849/1‑101 (MQ=255) cATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGGATAGATATCCAGTTCACCGGAAGTAATCGCCCcgcg < 2:3371074/85‑1 (MQ=255) cATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGGATAGATATCCAGTTCACCGGAAGTAATCGCCCCGCGCACCACAg > 1:3371854/1‑93 (MQ=255) cATCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGGATAGATATCCAGTTCACCGGAAGTAATCGCCCCGCGCACCACAGGAGTCGtt > 2:3371853/1‑101 (MQ=255) aTCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGGATAGATATCCAGTTCACCGGAAGTAATCGCCCCGCGCACCACAGGAGTCGTTc < 2:3371657/101‑1 (MQ=255) aTCGCTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGGATAGATATCCAGTTCACCGGAAGTAATCGCCCCGCGCACCACAGGAGTCGTTc > 1:3371857/1‑101 (MQ=255) | TTGCAGGCGCGGGCGTCAGCCAGATTAACTTGTTGTGCTCCGAATCGAGCTTTTTGACTTTCTCGTAACCTTGCTGCGCGTTTTTCCACGCTGCATCGTTTTCATCTTTAAAGAAGAAAGCGCCATTGCCGGTATATTCCGGATAGATATCCAGTTCACCGGAAGTAATCGCCCCGCGCACCACAGGAGTCGTTCC > NC_000913/2219103‑2219298 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |