Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,819,910 T→C E701G (GAA→GGA)  alaS ← alanine‑‑tRNA ligase/DNA‑binding transcriptional repressor

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,819,9100TC100.0% 1279.5 / NA 302E701G (GAA→GGA) alaSalanine‑‑tRNA ligase/DNA‑binding transcriptional repressor
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (162/140);  total (162/140)

Only 100 of 320 total aligned reads displayed.

AGCGCACTTTATCAGCCAGATTATTGCTATCGCCTTTCAGCAGATGCGCGACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTTCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAGATGATGCGGAACAGACCAATATCACCAGTGCGGCTGGCGTGAGT  >  NC_000913/2819812‑2820007
                                                                                                  |                                                                                                 
  cgcACTTTATCAGCCAGATTATTGCTATCGCCTTTCAGCAGATGCGCGACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCtcctcc                                                                                               <  2:4276910/101‑1 (MQ=255)
   gcACTTTATCAGCCAGATTATTGCTATCGCCTTTCAGCAGATGCGCGACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCg                                                                                              >  1:4277653/1‑101 (MQ=255)
   gcACTTTATCAGCCAGATTATTGCTATCGCCTTTCAGCAGATGCGCGACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCg                                                                                              <  2:4277126/101‑1 (MQ=255)
   gcACTTTATCAGCCAGATTATTGCTATCGCCTTTCAGCAGATGCGCGACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCg                                                                                              >  2:4277654/1‑101 (MQ=255)
     aCTTTATCAGCCAGATTATTGCTATCGCCTTTCAGCAGATGCGCGACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGt                                                                                            >  1:4277661/1‑101 (MQ=255)
     aCTTTATCAGCCAGATTATTGCTATCGCCTTTCAGCAGATGCGCGACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGt                                                                                            >  2:4277663/1‑101 (MQ=255)
       tttATCAGCCAGATTATTGCTATCGCCTTTCAGCAGATGCGCGACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTa                                                                                          <  1:4277021/101‑1 (MQ=255)
       tttATCAGCCAGATTATTGCTATCGCCTTTCAGCAGATGCGCGACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTa                                                                                          >  1:4277666/1‑101 (MQ=255)
         tATCAGCCAGATTATTGCTATCGCCTTTCAGCAGATGCGCGACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTAcc                                                                                        >  1:4277672/1‑101 (MQ=255)
            cAGCCAGATTATTGCTATCGCCTTTCAGCAGATGCGCGACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCt                                                                                     <  1:4277273/101‑1 (MQ=255)
            cAGCCAGATTATTGCTATCGCCTTTCAGCAGATGCGCGACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCt                                                                                     >  2:4277675/1‑101 (MQ=255)
             aGCCAGATTATTGCTATCGCCTTTCAGCAGATGCGCGACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCtt                                                                                    <  2:4277198/101‑1 (MQ=255)
               ccAGATTATTGCTATCGCCTTTCAGCAGATGCGCGACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCg                                                                                  >  2:4277678/1‑101 (MQ=255)
                cAGATTATTGCTATCGCCTTTCAGCAGATGCGCGACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGa                                                                                 >  1:4277680/1‑101 (MQ=255)
                 aGATTATTGCTATCGCCTTTCAGCAGATGCGCGACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGAt                                                                                <  2:4277313/101‑1 (MQ=255)
                    ttattGCTATCGCCTTTCAGCAGATGCGCGACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATacg                                                                             >  1:4277687/1‑101 (MQ=255)
                    ttattGCTATCGCCTTTCAGCAGATGCGCGACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATacg                                                                             >  2:4277688/1‑101 (MQ=255)
                     tattGCTATCGCCTTTCAGCAGATGCGCGACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATacga                                                                            <  2:4276981/101‑1 (MQ=255)
                     tattGCTATCGCCTTTCAGCAGATGCGCGACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATacga                                                                            <  2:4277304/101‑1 (MQ=255)
                     tattGCTATCGCCTTTCAGCAGATGCGCGACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATacga                                                                            >  2:4277692/1‑101 (MQ=255)
                      attGCTATCGCCTTTCAGCAGATGCGCGACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATacgac                                                                           <  2:4277203/101‑1 (MQ=255)
                      attGCTATCGCCTTTCAGCAGATGCGCGACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATacgac                                                                           >  1:4277694/1‑101 (MQ=255)
                       ttGCTATCGCCTTTCAGCAGATGCGCGACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATacgacg                                                                          <  2:4277188/101‑1 (MQ=255)
                          cTATCGCCTTTCAGCAGATGCGCGACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAAc                                                                       >  2:4277697/1‑101 (MQ=255)
                            aTCGCCTTTCAGCAGATGCGCGACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGc                                                                     >  1:4277702/1‑101 (MQ=255)
                             tCGCCTTTCAGCAGATGCGCGACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGcc                                                                    <  1:4277068/101‑1 (MQ=255)
                             tCGCCTTTCAGCAGATGCGCGACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGcc                                                                    >  2:4277703/1‑101 (MQ=255)
                              cGCCTTTCAGCAGATGCGCGACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCt                                                                   >  1:4277707/1‑101 (MQ=255)
                              cGCCTTTCAGCAGATGCGCGACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCt                                                                   <  1:4277204/101‑1 (MQ=255)
                               gCCTTTCAGCAGATGCGCGACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCgg                                                                                             >  2:4277711/1‑74 (MQ=255)
                               gCCTTTCAGCAGATGCGCGACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTg                                                                  <  1:4277229/101‑1 (MQ=255)
                                ccTTTCAGCAGATGCGCGACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTgc                                                                 >  1:4277713/1‑101 (MQ=255)
                                 cTTTCAGCAGATGCGCGACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCACCTCCGGTTACCGCTTCGATACGACGAACGCCTgca                                                                >  1:4277716/1‑101 (MQ=255)
                                   ttCAGCAGATGCGCGACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTgcagc                                                              <  2:4277025/101‑1 (MQ=255)
                                     cagcagATGCGCGACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGcagcag                                                            >  1:4277722/1‑101 (MQ=255)
                                      agcagATGCGCGACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGt                                                           >  2:4277724/1‑101 (MQ=255)
                                      agcagATGCGCGACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGt                                                           <  1:4277322/101‑1 (MQ=255)
                                         agATGCGCGACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTAcc                                                        >  2:4277730/1‑101 (MQ=255)
                                         agATGCGCGACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTAcc                                                        >  1:4277729/1‑101 (MQ=255)
                                             gcgcGACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCg                                                                                       <  1:4277085/66‑1 (MQ=255)
                                             gcgcGACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGAt                                                    >  1:4277736/1‑101 (MQ=255)
                                              cgcgACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGAtt                                                   <  1:4277617/101‑1 (MQ=255)
                                              cgcgACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGAtt                                                   >  2:4277737/1‑101 (MQ=255)
                                                cgACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCa                                                 >  2:4277740/1‑101 (MQ=255)
                                                 gACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCag                                                >  1:4277743/1‑101 (MQ=255)
                                                   cTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCagag                                              >  2:4277748/1‑101 (MQ=255)
                                                    ttCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCaga                                               >  1:4277752/1‑99 (MQ=255)
                                                     tCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAgat                                            <  2:4277057/101‑1 (MQ=255)
                                                      cGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAgatg                                           >  2:4277754/1‑101 (MQ=255)
                                                       gCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAgatga                                          <  1:4277416/101‑1 (MQ=255)
                                                        cTTAAGCGATCTCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAgatgat                                         <  2:4277074/101‑1 (MQ=255)
                                                        cTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAgatgat                                         >  1:4277757/1‑101 (MQ=255)
                                                         ttAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAGatgatg                                        <  1:4277117/101‑1 (MQ=255)
                                                         ttAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAGatgatg                                        >  2:4277761/1‑101 (MQ=255)
                                                         ttAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAGatgatg                                        <  1:4277358/101‑1 (MQ=255)
                                                          tAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAGATGATGc                                       >  1:4277763/1‑101 (MQ=255)
                                                            aGCGATCTCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGa                                                     <  2:4277174/85‑1 (MQ=255)
                                                              cGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAGATGATGCGGaa                                   >  2:4277770/1‑101 (MQ=255)
                                                              cGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAGATGATGCGGaa                                   >  1:4277769/1‑101 (MQ=255)
                                                                aTCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAGATGATGCGGAACa                                 <  1:4277291/101‑1 (MQ=255)
                                                                 tCGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAgatgat                                         >  2:4277775/1‑92 (MQ=255)
                                                                  cGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAGATGATGCGGAACAGa                               <  1:4277262/101‑1 (MQ=255)
                                                                  cGCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAGATGATGCGGAACAGa                               <  1:4277250/101‑1 (MQ=255)
                                                                   gCTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAGATGATGCGGAACAGAc                              >  1:4277776/1‑101 (MQ=255)
                                                                    cTGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAGATGATGCGGAACa                                 <  2:4277468/97‑1 (MQ=255)
                                                                     tGTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAGATGATGCGGAACAGACCa                            >  1:4277780/1‑101 (MQ=255)
                                                                      gTCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAGATGATGCGGAACAGACCaa                           <  1:4277190/101‑1 (MQ=255)
                                                                       tCTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAGATGATGCGGAACAGACCAat                          <  1:4277244/101‑1 (MQ=255)
                                                                        cTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAGATGATGCGGAACAGACCAata                         >  2:4277784/1‑101 (MQ=255)
                                                                        cTGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAGATGATGCGGAACAGACCAata                         <  2:4277271/101‑1 (MQ=255)
                                                                         tGCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAGATGATGCGGAACAGACCAatat                        >  1:4277785/1‑101 (MQ=255)
                                                                          gCATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAGATGATGCGGAACAGACCAATATc                       <  2:4277147/101‑1 (MQ=255)
                                                                           cATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAGATGATGCGGAACAGACCAATATCa                      >  1:4277790/1‑101 (MQ=255)
                                                                           cATGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAGATGATGCGGAACAGACCAATATCa                      <  1:4277160/101‑1 (MQ=255)
                                                                            aTGAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAGATGATGCGGAACAGACCAATATCAc                     <  2:4277154/101‑1 (MQ=255)
                                                                              gAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAGATGATGCGGAACAGACCAATATCACCa                   >  2:4277795/1‑101 (MQ=255)
                                                                              gAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAGATGATGCGGAACAGACCAATATCACCa                   <  2:4277357/101‑1 (MQ=255)
                                                                              gAACGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAGATGATGCGGAACAGACCAATATCACCa                   <  1:4277393/101‑1 (MQ=255)
                                                                               aaCGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATATGACGAACGCCTGCAGCAGTACCCGATTCAGAGATGATGCGGAACAGACCAATATCACCAg                  <  2:4277293/101‑1 (MQ=255)
                                                                               aaCGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAGATGATGCGGAACAGACCAATATCACCAg                  >  1:4277796/1‑101 (MQ=255)
                                                                                aCGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAGATGATGCGGAACAGACCAATATCACCAGt                 <  2:4277226/101‑1 (MQ=255)
                                                                                 cGGTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAgatg                                           >  2:4277801/1‑74 (MQ=255)
                                                                                  ggTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAGATGATGCGGAACAGACCAATATCACCAGTGc               <  2:4277399/101‑1 (MQ=255)
                                                                                  ggTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAGATGATGCGGAACAGACCAATATCACCAGTGc               <  2:4277089/101‑1 (MQ=255)
                                                                                   gTGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAGATGATGCGGAACAGACCAATATCACCAGTGCg              <  2:4277330/101‑1 (MQ=255)
                                                                                    tGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAGATGATGCGGAACAGACCAATATCAc                     <  1:4277370/93‑1 (MQ=255)
                                                                                    tGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAGATGATGCGGAACAGACCAATATCACCAGTGCgg             >  2:4277805/1‑101 (MQ=255)
                                                                                    tGGCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAGATGATGCGGAACAGACCAATATCACCAGTGCgg             >  1:4277803/1‑101 (MQ=255)
                                                                                     ggCGATAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAGATGATGCGGAACAGACCAatat                        >  2:4277808/1‑89 (MQ=255)
                                                                                         aTAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAGATGATGCGGAACAGACCAATATCACCAGTGCGGCTGGc        >  1:4277811/1‑101 (MQ=255)
                                                                                         aTAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAGATGATGCGGAACAGACCAATATCACCAGTGCGGCTGGc        <  2:4277380/101‑1 (MQ=255)
                                                                                          tAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAGATGATGCGGAACAGACCAATATCACCAGTGCGGCTGGCg       >  1:4277815/1‑101 (MQ=255)
                                                                                          tAGCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAGATGATGCGGAACAGACCAATATCACCAGTGCGGCTGGCg       <  1:4277135/101‑1 (MQ=255)
                                                                                            gCACCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAGATGATGCGGAACAGACCAATATCACCAGTGCGGCTGGCGTg     <  1:4277218/101‑1 (MQ=255)
                                                                                              aCCTCCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAGATGATGCGGAACAGACCAATATCACCAGTGCGGCTGGCGTGAg   >  2:4277818/1‑101 (MQ=255)
                                                                                               cctcctCCGGTTACCGCTTCGATACGACGAACGCCTgcagca                                                             <  2:4277280/42‑1 (MQ=255)
                                                                                               cctcctCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTAccc                                                       <  2:4277139/48‑1 (MQ=255)
                                                                                               cctcctCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAGATGATGCGGAACAGACCAATATCa                      <  2:4277253/81‑1 (MQ=255)
                                                                                               cctcctCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAGATGATGCGGAACAGACCAATATCACCAGTGCGGCTGGCGTGAGt  <  2:4277109/101‑1 (MQ=255)
                                                                                               cctcctCCGGTTACCGCTTCGACACGACGAACGCCTGCAGCAGTACCCGATTCAGAGATGATGCGGAACAGACCAATATCACCAGt                 <  1:4277461/86‑1 (MQ=255)
                                                                                                  |                                                                                                 
AGCGCACTTTATCAGCCAGATTATTGCTATCGCCTTTCAGCAGATGCGCGACTTCGCTTAAGCGATCGCTGTCTGCATGAACGGTGGCGATAGCACCTTCTCCGGTTACCGCTTCGATACGACGAACGCCTGCAGCAGTACCCGATTCAGAGATGATGCGGAACAGACCAATATCACCAGTGCGGCTGGCGTGAGT  >  NC_000913/2819812‑2820007

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑