BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	265,534	A→G	S4P (TCC→CCC)	ykfF ←	CP4‑6 prophage; protein YkfF

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	265,534	0	A	G	100.0%	1195.9 / NA	285	S4P (TCC→CCC)	ykfF	CP4‑6 prophage; protein YkfF
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (148/137); total (148/137)

Only 100 of 285 total aligned reads displayed.

GTGACTGCCCTGGTCGTCTTCGAGTGTGATATTGCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGATTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCGGGGTGAATTTGCTGGGGAAGATACTACTATCAGTCGTTGCT  >  NC_000913/265436‑265631

gTGACTGCCCTGGTCGTCTTCGAGTGTGATATTGCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGtt                                                                                                 <  2:415721/101‑1 (MQ=255)

gTGACTGCCCTGGTCGTCTTCGAGTGTGATATTGCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGtt                                                                                                 <  1:415700/101‑1 (MQ=255)

   aCTGCCCTGGTCGTCTTCGAGTGTGATATTGCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTggg                                                                                              >  1:416183/1‑101 (MQ=255)

   aCTGCCCTGGTCGTCTTCGAGTGTGATATTGCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTggg                                                                                              >  2:416185/1‑101 (MQ=255)

       cccTGGTCGTCTTCGAGTGTGATATTGCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCAt                                                                                          <  2:415616/101‑1 (MQ=255)

        ccTGGTCGTCTTCGAGTGTGATATTGCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCAtt                                                                                         >  2:416188/1‑101 (MQ=255)

         cTGGTCGTCTTCGAGTGTGATATTGCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCAttt                                                                                        >  1:416191/1‑101 (MQ=255)

         cTGGTCGTCTTCGAGTGTGATATTGCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCAttt                                                                                        >  1:416189/1‑101 (MQ=255)

           ggTCGTCTTCGAGTGTGATATTGCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTc                                                                                      >  2:416195/1‑101 (MQ=255)

            gtcgtcTTCGAGTGTGATATTGCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCg                                                                                     >  1:416197/1‑101 (MQ=255)

             tcgtcTTCGAGTGTGATATTGCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCgg                                                                                    >  1:416201/1‑101 (MQ=255)

             tcgtcTTCGAGTGTGATATTGCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCgg                                                                                    <  1:415530/101‑1 (MQ=255)

             tcgtcTTCGAGTGTGATATTGCTGTACGTGGTAGTGACCGCTTACGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCgg                                                                                    <  1:415736/101‑1 (MQ=255)

              cgtcTTCGAGTGTGATATTGCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCggg                                                                                   >  2:416204/1‑101 (MQ=255)

              cgtcTTCGAGTGTGATATTGCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCggg                                                                                   <  1:415837/101‑1 (MQ=255)

                 cTTCGAGTGTGATATTGCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTc                                                                                >  1:416211/1‑101 (MQ=255)

                  ttCGAGTGTGATATTGCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTcc                                                                               >  1:416214/1‑101 (MQ=255)

                     gAGTGTGATATTGCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGa                                                                            >  2:416219/1‑101 (MQ=255)

                     gAGTGTGATATTGCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGa                                                                            <  2:415543/101‑1 (MQ=255)

                     gAGTGTGATATTGCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGa                                                                            <  1:415467/101‑1 (MQ=255)

                     gAGTGTGATATTGCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGa                                                                            >  1:416220/1‑101 (MQ=255)

                       gtgtGATATTGCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATa                                                                          <  1:415606/101‑1 (MQ=255)

                        tgtgATATTGCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATaa                                                                         >  2:416226/1‑101 (MQ=255)

                        tgtgATATTGCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATaa                                                                         >  1:416225/1‑101 (MQ=255)

                           gATATTGCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAg                                                                      >  1:416230/1‑101 (MQ=255)

                            atatTGCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGa                                                                     >  2:416232/1‑101 (MQ=255)

                               ttGCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGaaaa                                                                  >  2:416234/1‑101 (MQ=255)

                                tGCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAAc                                                                 <  1:415797/101‑1 (MQ=255)

                                 gCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAAcc                                                                <  1:415730/101‑1 (MQ=255)

                                 gCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAAcc                                                                >  1:416238/1‑101 (MQ=255)

                                 gCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAAcc                                                                >  2:416239/1‑101 (MQ=255)

                                  cTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAAccc                                                               <  2:415735/101‑1 (MQ=255)

                                  cTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAAccc                                                               <  1:415773/101‑1 (MQ=255)

                                   tGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAAcccc                                                              >  1:416242/1‑101 (MQ=255)

                                    gTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCg                                                             <  1:415623/101‑1 (MQ=255)

                                      aCGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGc                                                           <  2:415844/101‑1 (MQ=255)

                                       cGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCa                                                          >  1:416247/1‑101 (MQ=255)

                                       cGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCa                                                          <  2:415671/101‑1 (MQ=255)

                                        gTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAg                                                         >  2:416248/1‑101 (MQ=255)

                                           gTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCt                                                      <  2:415876/101‑1 (MQ=255)

                                           gTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCt                                                      >  2:416252/1‑101 (MQ=255)

                                            tAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTg                                                     >  1:416254/1‑101 (MQ=255)

                                              gTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCt                                                   >  2:416258/1‑101 (MQ=255)

                                               tGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTa                                                  <  2:415783/101‑1 (MQ=255)

                                               tGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTa                                                  <  1:415768/101‑1 (MQ=255)

                                                 aCCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCCGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAAc                                                                 <  2:415760/84‑1 (MQ=255)

                                                  ccGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCt                                               >  1:416262/1‑101 (MQ=255)

                                                    gcttgcgcttgTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGt                                             >  2:416264/1‑101 (MQ=255)

                                                     cttgcgcttgTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTc                                            <  1:415722/101‑1 (MQ=255)

                                                     cttgcgcttgTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTc                                            >  2:416266/1‑101 (MQ=255)

                                                     cttgcgcttgTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTc                                            <  1:415861/101‑1 (MQ=255)

                                                      ttgcgcttgTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCg                                           >  1:416270/1‑101 (MQ=255)

                                                       tgcgcttgTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCgg                                          >  2:416271/1‑101 (MQ=255)

                                                         cgcttgTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCgggg                                        >  1:416274/1‑101 (MQ=255)

                                                          gcttgTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCgggg                                        >  2:416278/1‑100 (MQ=255)

                                                           cttgTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCGGGGTg                                      >  1:416280/1‑101 (MQ=255)

                                                            ttgTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGCCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCGGGGTGa                                     >  2:416283/1‑101 (MQ=255)

                                                             tgTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCGGGGTGaa                                    >  2:416287/1‑101 (MQ=255)

                                                              gTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCt                                               <  1:415899/89‑1 (MQ=255)

                                                                 tcCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCGGGGTGAATTTg                                <  2:415708/101‑1 (MQ=255)

                                                                 tcCGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCGGGGTGAATTTg                                <  2:415819/101‑1 (MQ=255)

                                                                  ccGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCGGGGTGAATTTGc                               >  1:416289/1‑101 (MQ=255)

                                                                  ccGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCGGGGTGAATTTGc                               <  2:415694/101‑1 (MQ=255)

                                                                   cGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCGGGGTGAATTTGCt                              >  2:416291/1‑101 (MQ=255)

                                                                   cGGGTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCGGGGTGAATTTGCt                              <  2:415894/101‑1 (MQ=255)

                                                                    gggTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTTCTAGCTGTCGGGGTGAATTTGCTg                             <  2:415794/101‑1 (MQ=255)

                                                                    gggTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCGGGGTGAATTTGCTg                             <  1:415849/101‑1 (MQ=255)

                                                                    gggTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCGGGGTGAATTTGCTg                             >  1:416295/1‑101 (MQ=255)

                                                                    gggTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCGGGGTGAATTTGCTg                             <  2:415948/101‑1 (MQ=255)

                                                                     ggTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCGGGGTGAATTTGCTgg                            <  1:415816/101‑1 (MQ=255)

                                                                      gTGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCGGGGTGAATTTGCTggg                           >  2:416297/1‑101 (MQ=255)

                                                                       tGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCGGGGTGAATTTGCTgggg                          <  2:415973/101‑1 (MQ=255)

                                                                       tGAAAGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCGGGGTGAATTTGCTgggg                          >  1:416300/1‑101 (MQ=255)

                                                                         aaaGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCGGGGTGAATTTGCTGGGGaa                        <  2:415831/101‑1 (MQ=255)

                                                                         aaaGGCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCGGGGTGAATTTGCTGGGGaa                        >  2:416304/1‑101 (MQ=255)

                                                                            ggCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCGGGGTGAATTTGCTGGGGAAGAt                     <  1:416038/101‑1 (MQ=255)

                                                                            ggCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCGGGGTGAATTTGCTGGGGAAGAt                     <  2:415755/101‑1 (MQ=255)

                                                                             gCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCGGGGTGAATTTGCTGGGGAAGAta                    <  2:415890/101‑1 (MQ=255)

                                                                             gCCCCGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCGGGGTGAATTTGCTGGGGAAGAta                    >  1:416306/1‑101 (MQ=255)

                                                                              ccccGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCGGGGTGAATTTGCTGGGGa                         >  1:416311/1‑95 (MQ=255)

                                                                              ccccGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCGGGGTGAATTTGCTGGGGAAGAtac                   <  1:416071/101‑1 (MQ=255)

                                                                              ccccGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGATAGCTGTCGGGGTGAATTTGCTGGGGAAGAtac                   >  2:416309/1‑101 (MQ=255)

                                                                               cccGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCGGGGTGa                                     >  2:416313/1‑82 (MQ=255)

                                                                                 cGGTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCGGGGTGAATTTGCTGGGGAAGAtactac                <  1:415978/101‑1 (MQ=255)

                                                                                   gTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCGGGGTGAATTTGCTGGGGAAGATActacta              >  2:416317/1‑101 (MQ=255)

                                                                                   gTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCGGGGTGAATTTGCTGGGGAAGATActacta              <  1:415962/101‑1 (MQ=255)

                                                                                   gTGGCAGCAACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCGGGGTGAATTTGCTGGGGAAGATActacta              <  2:415851/101‑1 (MQ=255)

                                                                                       cagcaACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCGGGGTGAATTTGCTGGGGAAGATACTACTATCAg          >  2:416320/1‑101 (MQ=255)

                                                                                       cagcaACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCGGGGTGAATTTGCTGGGGAAGATACTACTATCAg          <  1:416119/101‑1 (MQ=255)

                                                                                        agcaACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCGGGGTGAATTTGCTGGGGAAGATACTACTATCAGt         >  1:416324/1‑101 (MQ=255)

                                                                                        agcaACACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCGGGGTGAATTTGCTGGGGAAGATACTACTATCAGt         <  2:416152/101‑1 (MQ=255)

                                                                                           aaCACGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCGGGGTGAATTTGCTGGGGAAGATACTACTATCAGTCGt      >  2:416327/1‑101 (MQ=255)

                                                                                            acacGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCGGGGTGAATTTGCTGGGGAAGATACTACTATCAGTCGtt     >  1:416329/1‑101 (MQ=255)

                                                                                            acacGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCGGGGTGAATTTGCTGGGGAAGATACTACTATCAGTCGtt     <  1:415916/101‑1 (MQ=255)

                                                                                            acacGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCGGGGTGAATTTGCTGGGGAAGATACTACTATCAGTCGtt     <  2:415873/101‑1 (MQ=255)

                                                                                             cacGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCGGGGTGAATTTGCTGGGGAAGATACTACTATCAGTCGTtg    <  1:415887/101‑1 (MQ=255)

                                                                                             cacGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCGGGGTGAATTTGCTGGGGAAGATACTACTATCAGTCGTtg    <  2:416004/101‑1 (MQ=255)

                                                                                              acGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCGGGGTGAATTTGCTGGGGAAGATACTACTATCAGTCGTtgc   <  1:415830/101‑1 (MQ=255)

                                                                                               cGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCGGGGTGAATTTGCTGGGGAAGATACTACTATCAGTCGTtgct  <  1:415761/101‑1 (MQ=255)

                                                                                               cGGGTTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCGGGGTGAATTTGCTGGGGAAGATACTACTATCAGTCGTtgct  <  2:416216/101‑1 (MQ=255)

GTGACTGCCCTGGTCGTCTTCGAGTGTGATATTGCTGTACGTGGTAGTGACCGCTTGCGCTTGTCTCCGGGTGAAAGGCCCCGGTGGCAGCAACACGGATTGGGTCATTTTCGGGCTCCTGATAAAAGAAAACCCCGGCAGCCTGCTAGCTGTCGGGGTGAATTTGCTGGGGAAGATACTACTATCAGTCGTTGCT  >  NC_000913/265436‑265631

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`