BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	456,497	(T)_8→7	intergenic (+66/‑180)	tig → / → clpP	trigger factor/ATP‑dependent Clp protease proteolytic subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	456,490	0	T	.	100.0%	1231.4 / NA	234	intergenic (+59/‑187)	tig/clpP	trigger factor/ATP‑dependent Clp protease proteolytic subunit
Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (113/121); total (113/121)

Only 100 of 255 total aligned reads displayed.

AAAGAAACCACTTTCAACGAGCTGATGAACCAGCAGGCGTAATTTACGCAGCATAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGCTTTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAGATTGTTATGCTTGAAATATGGTGATGC  >  NC_000913/456390‑456586

  aGAAACCACTTTCAACGAGCTGATGAACCAGCAGGCGTAATTTACGCAGCATAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGCttt                                                                                                >  2:607830/1‑101 (MQ=255)

      aCCACTTTCAACGAGCTGATGAACCAGCAGGCGTAATTTACGCAGCATAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGCttttttt                                                                                            >  1:607833/1‑101 (MQ=255)

      aCCACTTTCAACGAGCTGATGAACCAGCAGGCGTAATTTACGCAGCATAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGCttttttt                                                                                            <  2:607553/101‑1 (MQ=255)

      aCCACTTTCAACGAGCTGATGAACCAGAAGGCGTAATTTACGCAGCATAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGCttttttt                                                                                            >  2:607832/1‑101 (MQ=255)

       ccACTTTCAACGAGCTGATGAACCAGCAGGCGTAATTTACGCAGCATAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGCtttttttg                                                                                           <  2:607508/101‑2 (MQ=255)

       ccACTTTCAACGAGCTGATGAACCAGCAGGCGTAATTTACGCAGCATAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGCtttttt                                                                                             <  2:607561/99‑1 (MQ=255)

        cACTTTCAACGAGCTGATGAACCAGCAGGCGTAATTTACGCAGCATAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGCtttttttgt                                                                                          >  1:607836/1‑99 (MQ=255)

        cACTTTCAACGAGCTGATGAACCAGCAGGCGTAATTTACGCAGCATAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGCtttttttgt                                                                                          <  2:607777/101‑3 (MQ=255)

          cTTTCAACGAGCTGATGAACCAGCAGGCGTAATTTACGCAGCATAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGCtttttttgtca                                                                                        >  2:607837/1‑97 (MQ=255)

            ttCAACGAGCTGATGAACCAGCAGGCGTAATTTACGCAGCATAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGCttttt                                                                                              >  2:607843/1‑93 (MQ=255)

            ttCAACGAGCTGATGAACCAGCAGGCGTAATTTACGCAGCATAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATg                                                                                     >  1:607842/1‑101 (MQ=255)

              cAACGAGCTGATGAACCAGCAGGCGTAATTTACGCAGCATAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGaa                                                                                   <  2:607476/101‑1 (MQ=255)

              cAACGAGCTGATGAACCAGCAGGCGTAATTTACGCAGCATAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGaa                                                                                   >  2:607846/1‑101 (MQ=255)

               aaCGAGCTGATGAACCAGCAGGCGTAATTTACGCAGCATAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAAt                                                                                  >  1:607852/1‑101 (MQ=255)

               aaCGAGCTGATGAACCAGCAGGCGTAATTTACGCAGCATAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAAt                                                                                  >  1:607849/1‑101 (MQ=255)

               aaCGAGCTGATGAACCAGCAGGCGTAATTTACGCAGCATAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAAt                                                                                  >  1:607854/1‑101 (MQ=255)

                aCGAGCTGATGAACCAGCAGGCGTAATTTACGCAGCATAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAAtt                                                                                 >  2:607857/1‑101 (MQ=255)

                 cGAGCTGATGAACCAGCAGGCGTAATTTACGCAGCATAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAAttt                                                                                >  1:607859/1‑101 (MQ=255)

                 cGAGCTGATGAACCAGCAGGCGTAATTTACGCAGCATAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAAttt                                                                                <  2:607494/101‑1 (MQ=255)

                  gAGCTGATGAACCAGCAGGCGTAATTTACGCAGCATAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAAtttt                                                                               >  2:607864/1‑101 (MQ=255)

                  gAGCTGATGAACCAGCAGGCGTAATTTACGCAGCATAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAAtttt                                                                               <  2:607597/101‑1 (MQ=255)

                   aGCTGATGAACCAGCAGGCGTAATTTACGCAGCATAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTg                                                                              >  1:607866/1‑101 (MQ=255)

                   aGCTGATGAACCAGCAGGCGTAATTTACGCAGCATAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTg                                                                              <  2:607342/101‑1 (MQ=255)

                     cTGATGAACCAGCAGGCGTAATTTACGCAGCATAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCa                                                                            <  2:607652/101‑1 (MQ=255)

                     cTGATGAACCAGCAGGCGTAATTTACGCAGCATAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCa                                                                            >  1:607868/1‑101 (MQ=255)

                     cTGATGAACCAGCAGGCGTAATTTACGCAGCATAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCa                                                                            <  1:607546/101‑1 (MQ=255)

                      tgatgaACCAGCAGGCGTAATTTACGCAGCATAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCAt                                                                           >  1:607872/1‑101 (MQ=255)

                       gatgaACCAGCAGGCGTAATTTACGCAGCATAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATg                                                                          <  1:607376/101‑1 (MQ=255)

                         tgaACCAGCAGGCGTAATTTACGCAGCATAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGa                                                                        >  2:607875/1‑101 (MQ=255)

                          gaACCAGCAGGCGTAATTTACGCAGCATAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGaa                                                                       <  1:607587/101‑1 (MQ=255)

                          gaACCAGCAGGCGTAATTTACGCAGCATAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGaa                                                                       >  1:607876/1‑101 (MQ=255)

                           aaCCAGCAGGCGTAATTTACGCAGCATAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAAc                                                                      <  2:607453/101‑1 (MQ=255)

                             ccAGCAGGCGTAATTTACGCAGCATAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCg                                                                    <  2:607461/101‑1 (MQ=255)

                                   ggCGTAATTTACGCAGCATAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGaa                                                              >  2:607881/1‑101 (MQ=255)

                                    gCGTAATTTACGCAGCATAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGaaa                                                             <  1:607479/101‑1 (MQ=255)

                                    gCGTAATTTACGCAGCATAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGaaa                                                             >  1:607882/1‑101 (MQ=255)

                                     cGTAATTTACGCAGCATAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGaaaa                                                            <  1:607350/101‑1 (MQ=255)

                                        aaTTTACGCAGCATAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGcc                                                         >  2:607886/1‑101 (MQ=255)

                                         aTTTACGCAGCATAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCct                                                        >  1:607887/1‑101 (MQ=255)

                                           ttACGCAGCATAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCctct                                                      >  2:607890/1‑101 (MQ=255)

                                            tACGCAGCATAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCtt                                                     >  1:607892/1‑101 (MQ=255)

                                             aCGCAGCATAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCttt                                                    <  1:607433/101‑1 (MQ=255)

                                              cGCAGCATAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTc                                                   <  2:607400/101‑1 (MQ=255)

                                               gcagcaTAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCg                                                  <  2:607520/101‑1 (MQ=255)

                                               gcagcaTAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTATGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCg                                                  <  1:607523/101‑1 (MQ=255)

                                                cagcaTAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCgg                                                 <  2:607691/101‑1 (MQ=255)

                                                cagcaTAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCgg                                                 <  2:607579/101‑1 (MQ=255)

                                                 agcaTAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGCtttttttgtc                                                                                         >  2:607895/1‑58 (MQ=255)

                                                     tAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTa                                            >  1:607898/1‑101 (MQ=255)

                                                      aaCGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAg                                           >  2:607903/1‑101 (MQ=255)

                                                      aaCGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAg                                           >  2:607900/1‑101 (MQ=255)

                                                        cgcgCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCg                                         <  2:607573/101‑1 (MQ=255)

                                                         gcgcTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGt                                        >  1:607906/1‑101 (MQ=255)

                                                          cgcTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTa                                       <  1:607418/101‑1 (MQ=255)

                                                           gcTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTaa                                      <  1:607449/101‑1 (MQ=255)

                                                           gcTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTaa                                      >  2:607909/1‑101 (MQ=255)

                                                             tAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTaaca                                    <  1:607519/101‑1 (MQ=255)

                                                             tAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTaaca                                    >  2:607912/1‑101 (MQ=255)

                                                               aaTTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGaa                                                                                   >  2:607915/1‑52 (MQ=255)

                                                                aTTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAacaaca                                 <  2:607345/101‑1 (MQ=255)

                                                                aTTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAacaaca                                 >  1:607917/1‑101 (MQ=255)

                                                                aTTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAacaaca                                 <  2:607432/101‑1 (MQ=255)

                                                                  tCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAACAACaaa                               >  2:607920/1‑101 (MQ=255)

                                                                  tCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAACAACaaa                               >  1:607921/1‑101 (MQ=255)

                                                                    gCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAg                             <  1:607566/101‑1 (MQ=255)

                                                                    gCACAAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAg                             <  2:607538/101‑1 (MQ=255)

                                                                     cacaAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAGa                            >  1:607924/1‑101 (MQ=255)

                                                                      acaAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAGAt                           <  1:607596/101‑1 (MQ=255)

                                                                      acaAAGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAGAt                           <  2:607510/101‑1 (MQ=255)

                                                                         aaGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAGATTGt                        <  1:607398/101‑1 (MQ=255)

                                                                          aGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAGATTGtt                       >  2:607928/1‑101 (MQ=255)

                                                                          aGGCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAGATTGtt                       <  1:607667/101‑1 (MQ=255)

                                                                           ggCCCGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAGATTGTTa                      >  1:607929/1‑101 (MQ=255)

                                                                             cccGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAGATTGTTATg                    <  1:607458/101‑1 (MQ=255)

                                                                             cccGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAGATTGTTATg                    <  1:607320/101‑1 (MQ=255)

                                                                             cccGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAGATTGTTATg                    <  1:607634/101‑1 (MQ=255)

                                                                             cccGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAGATTGTTATg                    <  1:607625/101‑1 (MQ=255)

                                                                              ccGTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAGATTGTTATGc                   >  2:607933/1‑101 (MQ=255)

                                                                                gTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAGATTGTTATGCtt                 >  1:607934/1‑101 (MQ=255)

                                                                                gTCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAGATTGTTATGCtt                 <  2:607551/101‑1 (MQ=255)

                                                                                 tCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAGATTGTTATGCTTg                <  2:607469/101‑1 (MQ=255)

                                                                                 tCACCGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAGATTGTTATGCTTg                >  1:607937/1‑101 (MQ=255)

                                                                                  cgccGCCAGGTTGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTaa                                      <  2:607490/76‑1 (MQ=255)

                                                                                     cGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAGATTGTTATGCTTGAAat            <  1:607557/101‑1 (MQ=255)

                                                                                     cGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAGATTGTTATGCTTGAAat            <  1:607690/101‑1 (MQ=255)

                                                                                     cGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAGATTGTTATGCTTGAAat            >  2:607941/1‑101 (MQ=255)

                                                                                     cGCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAGATTGTTATGCTTGAAat            >  1:607942/1‑101 (MQ=255)

                                                                                      gCCAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAGATTGTTATGCTTGAAata           <  1:607481/101‑1 (MQ=255)

                                                                                       ccAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAGATTGTTATGCTTGAAatat          <  1:607611/101‑1 (MQ=255)

                                                                                        cAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAGATTGTTATGCTTGAAATATg         >  2:607946/1‑101 (MQ=255)

                                                                                        cAGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAGATTGTTATGCTTGAAATATg         >  1:607945/1‑101 (MQ=255)

                                                                                         aGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAGATTGTTATGc                   <  2:607457/90‑1 (MQ=255)

                                                                                         aGGTGGTGGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAGATTGTTATGCTTGa               <  1:607537/94‑1 (MQ=255)

                                                                                           gtggtgGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAGATTGTTATGCTTGAAATATGGTg      <  2:607755/101‑1 (MQ=255)

                                                                                           gtggtgGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAGATTGTTATGCTTGAAATATGGTg      <  2:607605/101‑1 (MQ=255)

                                                                                           gtggtgGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAGATTGTTATGCTTGAAATATGGTg      >  1:607950/1‑101 (MQ=255)

                                                                                           gtggtgGGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAGATTGTTATGCTTGAAATATGGTg      <  1:607497/101‑1 (MQ=255)

                                                                                            tggtggGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAGATTGTTATGCTTGAAATATGGTGa     >  1:607952/1‑101 (MQ=255)

                                                                                               tggGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAGATTGTTATGCTTGAAATATGGTGATGc  >  2:607956/1‑101 (MQ=255)

                                                                                               tggGC‑TTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAGATTGTTATGCTTGAAATATGGTGATGc  >  1:607959/1‑101 (MQ=255)

AAAGAAACCACTTTCAACGAGCTGATGAACCAGCAGGCGTAATTTACGCAGCATAACGCGCTAAATTCGCACAAAGGCCCGTCACCGCCAGGTGGTGGGCTTTTTTTTGTCATGAATTTTGCATGGAACCGTGCGAAAAGCCTCTTTCGGTGTTAGCGTAACAACAAAAGATTGTTATGCTTGAAATATGGTGATGC  >  NC_000913/456390‑456586

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`