| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 2,013,366 | (C)5→4 | coding (138/1659 nt) | fliF → | flagellar basal‑body MS‑ring and collar protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,013,362 | 0 | C | . | 99.6% | 1244.6 / ‑2.6 | 240 | coding (134/1659 nt) | fliF | flagellar basal‑body MS‑ring and collar protein |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base . (109/130); minor base G (1/0); total (110/130) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.58e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 248 total aligned reads displayed.
GAGTGGCTTAATCGCCTGCGTGCGAATCCGAAAATTCCATTGATTGTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAGCCCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGATGGTGGCGCAATTGTCAGCCAACTGACGCAAATGAATATTCCTTACCGCTTCAG > NC_000913/2013262‑2013458 | gTGGCTTAATCGCCTGCGTGCGAATCCGAAAATTCCATTGATTGTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAGccc > 2:2622217/1‑101 (MQ=255) gTGGCTTAATCGCCTGCGTGCGAATCCGAAAATTCCATTGATTGTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAGccc < 2:2621854/101‑1 (MQ=255) tGGCTTAATCGCCTGCGTGCGAATCCGAAAATTCCATTGATTGTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAGcccc < 2:2621831/101‑1 (MQ=255) tGGCTTAATCGCCTGCGTGCGAATCCGAAAATTCCATTGATTGTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAGcccc < 2:2621906/101‑1 (MQ=255) tAATCGCCTGCGTGCGAATCCGAAAATTCCATTGATTGTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTa > 1:2622219/1‑101 (MQ=255) aaTCGCCTGCGTGCGAATCCGAAAATTCCATTGATTGTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTAc > 2:2622222/1‑101 (MQ=255) aTCGCCTGCGTGCGAATCCGAAAATTCCATTGATTGTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTAcc > 1:2622223/1‑101 (MQ=255) cGCCTGCGTGCGAATCCGAAAATTCCATTGATTGTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTAc > 2:2622226/1‑98 (MQ=255) cGCCTGCGTGCGAATCCGAAAATTCCATTGATTGTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGc < 1:2621664/101‑1 (MQ=255) gCCTGCGTGCGAATCCGAAAATTCCATTGATTGTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGca > 1:2622228/1‑101 (MQ=255) gCCTGCGTGCGAATCCGAAAATTCCATTGATTGTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGca < 2:2621803/101‑1 (MQ=255) gCCTGCGTGCGAATCCGAAAATTCCATTGATTGTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGca < 1:2621717/101‑1 (MQ=255) ccTGCGTGCGAATCCGAAAATTCCATTGATTGTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGcac < 1:2621946/101‑1 (MQ=255) ccTGCGTGCGAATCCGAAAATTCCATTGATTGTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGcac < 2:2621792/101‑1 (MQ=255) cTGCGTGCGAATCCGAAAATTCCATTGATTGTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGcaca < 2:2621877/101‑1 (MQ=255) cTGCGTGCGAATCCGAAAATTCCATTGATTGTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGcaca > 2:2622230/1‑101 (MQ=255) tgcgtgcgAATCCGAAAATTCCATTGATTGTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACat < 2:2622132/101‑1 (MQ=255) tgcgtgcgAATCCGAAAATTCCATTGATTGTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACat > 2:2622233/1‑101 (MQ=255) cgtgcgAATCCGAAAATTCCATTGATTGTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACatta < 1:2621785/101‑1 (MQ=255) tgcgAATCCGAAAATTCCATTGATTGTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACattatt < 2:2622046/101‑1 (MQ=255) gcgAATCCGAAAATTCCATTGATTGTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTc > 1:2622236/1‑101 (MQ=255) aaTCCGAAAATTCCATTGATTGTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGc < 1:2621865/101‑1 (MQ=255) aaTCCGAAAATTCCATTGATTGTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGc > 2:2622238/1‑101 (MQ=255) aTCCGAAAATTCCATTGATTGTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCa > 2:2622241/1‑101 (MQ=255) aTCCGAAAATTCCATTGATTGTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCa > 1:2622242/1‑101 (MQ=255) ccGAAAATTCCATTGATTGTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAAt > 1:2622246/1‑101 (MQ=255) aaaaTTCCATTGATTGTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTa < 2:2621576/79‑1 (MQ=255) aaaaTTCCATTGATTGTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCtt > 1:2622249/1‑101 (MQ=255) aaaTTCCATTGATTGTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCttt > 2:2622252/1‑101 (MQ=255) aaaTTCCATTGATTGTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCttt < 1:2621631/101‑1 (MQ=255) aaaTTCCATTGATTGTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCttt < 1:2621998/101‑1 (MQ=255) aaaTTCCATTGATTGTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCttt < 1:2621812/101‑1 (MQ=255) aaTTCCATTGATTGTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTc > 1:2622255/1‑101 (MQ=255) aaTTCCATTGATTGTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTc > 2:2622254/1‑101 (MQ=255) aTTCCATTGATTGTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTcc < 2:2621836/101‑1 (MQ=255) aTTCCATTGATTGTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTcc < 1:2621857/101‑1 (MQ=255) aTTCCATTGATTGTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTcc > 1:2622257/1‑101 (MQ=255) ttCCATTGATTGTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCg < 1:2622045/101‑1 (MQ=255) tCCATTGATTGTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGa < 1:2622113/101‑1 (MQ=255) ccATTGATTGTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGAt < 2:2621816/101‑1 (MQ=255) ccATTGATTGTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGAt > 1:2622261/1‑101 (MQ=255) attgattgTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCa > 2:2622266/1‑101 (MQ=255) attgattgTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCa > 1:2622268/1‑101 (MQ=255) tgattgTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAgg < 1:2621802/101‑1 (MQ=255) tgattgTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAgg < 2:2621747/101‑1 (MQ=255) tgattgTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAgg < 1:2621872/101‑1 (MQ=255) gattgTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGa > 2:2622269/1‑101 (MQ=255) attgTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGAt < 2:2621965/101‑1 (MQ=255) attgTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGAt < 2:2622024/101‑1 (MQ=255) attgTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGAt < 1:2621582/101‑1 (MQ=255) ttgttgCCTGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGAtg < 2:2621783/101‑1 (MQ=255) tgttgCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGAtgg < 2:2621993/101‑1 (MQ=255) gttgCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGAtggt < 2:2622064/101‑1 (MQ=255) gttgCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGAtggt > 2:2622274/1‑101 (MQ=255) gttgCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGAtggt > 1:2622275/1‑101 (MQ=255) ttgCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGAtggtg < 1:2621891/101‑1 (MQ=255) tgCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGc > 1:2622277/1‑66 (MQ=255) ggTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGATGGTGGCGCa > 2:2622281/1‑101 (MQ=255) ttCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTcc > 1:2622284/1‑81 (MQ=255) ttCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGATGGTGGCGCAAt < 2:2621866/101‑1 (MQ=255) ttCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGATGGTGGCGCAAt < 2:2621942/101‑1 (MQ=255) tCCGCGGCAGTGGCGGTCATGTTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGATGGTGGCGCAAtt > 1:2622286/1‑101 (MQ=255) tCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGATGGTGGCGCAAtt < 1:2621741/101‑1 (MQ=255) tCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGATGGTGGCGCAAtt < 2:2622036/101‑1 (MQ=255) tCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGATGGTGGCGCAAtt < 2:2621954/101‑1 (MQ=255) ccGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGc < 1:2621765/70‑1 (MQ=255) ccGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGATGGTGGCGCAATTg > 2:2622287/1‑101 (MQ=255) ccGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGATGGTGGCGCAATTg < 2:2621870/101‑1 (MQ=255) cgcgGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGATGGTGGCGCAATTGt > 1:2622292/1‑101 (MQ=255) cgcgGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGATGGTGGCGCAATTGt > 2:2622290/1‑101 (MQ=255) gcgGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGATGGTGGCGCAATTGTc < 2:2621938/101‑1 (MQ=255) ggCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGATGGTGGCGCAATTGTCAg < 1:2622067/101‑1 (MQ=255) gCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGATGGTGGCGCAATTGTCAGc > 2:2622295/1‑101 (MQ=255) cAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGATGGTGGCGCAATTGTCAGcc > 1:2622299/1‑101 (MQ=255) cAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGATGGTGGCGCAATTGTCAGcc > 2:2622298/1‑101 (MQ=255) aGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGATGGTGGCGCAATTGTCAGcc < 2:2621764/100‑1 (MQ=255) tGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGATGGTGGCGCAATTGTCAGCCAAc < 1:2621878/101‑1 (MQ=255) gCGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGATGGTGGCGCAATTGTCAGCCAACTg > 1:2622304/1‑101 (MQ=255) cGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGATGGTGGCGCAATTGTCAGCCAACTGa > 2:2622307/1‑101 (MQ=255) cGGTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGATGGTGGCGCAATTGTCAGCCAACTGa > 1:2622306/1‑101 (MQ=255) ggTCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGATGGTGGCGCAATTGTCAGCCAACTGAc > 2:2622309/1‑101 (MQ=255) tCATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGATGGTGGCGCAATTGTCAGCCAACTGACGc > 2:2622312/1‑101 (MQ=255) cATGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGATGGTGGCGCAATTGTCAGCCAACTGACGCa < 2:2621683/101‑1 (MQ=255) aTGGTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGATGGTGGCGCAATTGTCAGCCAACTGACGCaa > 1:2622315/1‑101 (MQ=255) ggTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGATGGTGGCGCAATTGTCAGCCAACTGACGCAAAt < 1:2621902/101‑1 (MQ=255) ggTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGATGGTGGCGCAATTGTCAGCCAACTGACGCAAAt > 1:2622318/1‑101 (MQ=255) gTCGCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGATGGTGGCGCAATTGTCAGCCAACTGACGCAAATg < 1:2621977/101‑1 (MQ=255) gCACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGATGGTGGCGCAATTGTCAGCCAACTGACGCAAATGAat < 1:2622145/101‑1 (MQ=255) cACTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGATGGTGGCGCAATTGTCAGCCAACTGACGCAAATGAata < 2:2622002/101‑1 (MQ=255) aCTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGATGGTGGCGCAATTGTCAGCCAACTGACGCAAATGAatat < 1:2621910/101‑1 (MQ=255) aCTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGATGGTGGCGCAATTGTCAGCCAACTGACGCAAATGAatat > 2:2622320/1‑101 (MQ=255) cTGATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGATGGTGGCGCAATTGTCAGCCAACTGACGCAAATGa < 2:2622160/96‑1 (MQ=255) gATCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGATGGTGGCGCAATTGTCAGCCAACTGACGCAAATGAATATTcc < 2:2621884/101‑1 (MQ=255) aTCCTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGATGGTGGCGCAATTGTCAGCCAACTGACGCAAATGAATATTCCt > 2:2622323/1‑101 (MQ=255) cTGTGGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGATGGTGGCGCAATTGTCAGCCAACTGACGCAAATGAATATTCCTTAc < 2:2621849/101‑1 (MQ=255) tgGGCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGATGGTGGCGCAATTGTCAGCCAACTGACGCAAATGAATATTCCTTACCGc < 1:2621833/101‑1 (MQ=255) gggCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGATGGTGGCGCAATTGTCAGCCAACTGACGCAAATGAATATTCCTTACCGCt > 2:2622326/1‑101 (MQ=255) gCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGATGGTGGCGCAATTGTCAGCCAACTGACGCAAATGAATATTCCTTACCGCTTc > 1:2622327/1‑101 (MQ=255) gCGAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGATGGTGGCGCAATTGTCAGCCAACTGACGCAAATGAATATTCCTTACCGCTTc < 1:2621845/101‑1 (MQ=255) gAAAG‑CCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGATGGTGGCGCAATTGTCAGCCAACTGACGCAAATGAATATTCCTTACCGCTTCAg < 2:2621921/101‑1 (MQ=255) | GAGTGGCTTAATCGCCTGCGTGCGAATCCGAAAATTCCATTGATTGTTGCCGGTTCCGCGGCAGTGGCGGTCATGGTCGCACTGATCCTGTGGGCGAAAGCCCCCGACTACCGCACATTATTCAGCAATCTTTCCGATCAGGATGGTGGCGCAATTGTCAGCCAACTGACGCAAATGAATATTCCTTACCGCTTCAG > NC_000913/2013262‑2013458 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |