| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,871,832 | (G)6→7 | coding (1448/1476 nt) | cdgI → | putative c‑di‑GMP binding protein CdgI |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,871,826 | 1 | . | G | 99.5% | 857.5 / ‑3.4 | 208 | coding (1442/1476 nt) | cdgI | putative c‑di‑GMP binding protein CdgI |
| Reads supporting (aligned to +/- strand): ref base . (0/1); new base G (94/113); total (94/114) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
Only 100 of 228 total aligned reads displayed.
ATGACCATCAGTATTGGCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCATACAATTTATTACTATTA > NC_000913/1871726‑1871921 | aTGACCATCAGTATTGGCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGa < 1:2440714/101‑1 (MQ=255)aTGACCATCAGTATTGGCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGa > 1:2441158/1‑101 (MQ=255) gACCATCAGTATTGGCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑gg > 2:2441160/1‑101 (MQ=255) cATCAGTATTGGCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑ggggg > 1:2441163/1‑101 (MQ=255) aTCAGTATTGGCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑gggggg > 1:2441165/1‑101 (MQ=255) cAGTATGGGCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑gggggggc < 2:2440797/101‑3 (MQ=255) gTATTGGCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑gggggggcaa > 2:2441168/1‑97 (MQ=255) aTTGGCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGcaaca < 1:2440826/101‑1 (MQ=255) aTTGGCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGcaaca < 1:2440832/101‑1 (MQ=255) ttGGCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGcaacaa > 1:2441173/1‑101 (MQ=255) tGGCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACaaa < 1:2440931/101‑1 (MQ=255) tGGCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACaaa > 2:2441174/1‑101 (MQ=255) ggCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAg < 1:2440812/101‑1 (MQ=255) gCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGt > 1:2441176/1‑101 (MQ=255) gCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGt < 1:2440688/101‑1 (MQ=255) cGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGat > 2:2441178/1‑101 (MQ=255) ggTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGatt < 2:2440767/101‑1 (MQ=255) ggTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGatt > 2:2441180/1‑101 (MQ=255) ggTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGatt > 1:2441181/1‑101 (MQ=255) gTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGatta > 1:2441185/1‑101 (MQ=255) ttttttCAACGGGTGACACGCGTAATATCTCGCTTGCCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGattat < 1:2440640/101‑1 (MQ=255) tttttCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGattatt > 2:2441189/1‑101 (MQ=255) tttttCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGattatt < 1:2440602/101‑1 (MQ=255) ttttCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATtc < 1:2440926/101‑1 (MQ=255) ttttCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATtc < 2:2441072/101‑1 (MQ=255) ttttCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATtc > 1:2441191/1‑101 (MQ=255) tttCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATtca < 2:2441016/101‑1 (MQ=255) ttCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATtcat < 2:2440754/101‑1 (MQ=255) cAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATtcatca > 2:2441192/1‑101 (MQ=255) aaCGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATtcat > 2:2441195/1‑98 (MQ=255) aCGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGcaaca > 2:2441199/1‑83 (MQ=255) aCGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAg > 1:2441198/1‑86 (MQ=255) aCGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCata < 1:2441071/101‑1 (MQ=255) cGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCatat > 1:2441202/1‑101 (MQ=255) gggTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATAtt > 2:2441203/1‑101 (MQ=255) cacGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTg > 2:2441207/1‑101 (MQ=255) cgcgTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCa > 2:2441209/1‑101 (MQ=255) gcgTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCaa < 2:2440853/101‑1 (MQ=255) gTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCaaaa > 1:2441211/1‑101 (MQ=255) tAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCaaaaa < 1:2440760/101‑1 (MQ=255) tAATATCTCGCTTGTCATGACGGAAACAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCaaaaa < 2:2440902/101‑1 (MQ=255) atatCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAata < 2:2440947/101‑1 (MQ=255) atatCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAata > 2:2441213/1‑101 (MQ=255) atCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATAtt > 1:2441215/1‑101 (MQ=255) ctcGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCa < 2:2440941/101‑1 (MQ=255) tcGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCag < 2:2440891/101‑1 (MQ=255) ctcTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATtcat < 2:2440780/73‑1 (MQ=255) gCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGt < 2:2440653/85‑1 (MQ=255) gCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCagag > 1:2441218/1‑101 (MQ=255) gCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCagag > 1:2441222/1‑101 (MQ=255) gCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCagag > 2:2441220/1‑101 (MQ=255) cTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGc < 1:2440986/101‑1 (MQ=255) ttGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGcc < 2:2440918/101‑1 (MQ=255) ttGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGcc > 2:2441226/1‑101 (MQ=255) ttGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGcc > 1:2441225/1‑101 (MQ=255) tCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATg > 1:2441229/1‑101 (MQ=255) tCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATg < 1:2440808/101‑1 (MQ=255) aTGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCt > 2:2441231/1‑101 (MQ=255) aTGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCt < 2:2440971/101‑1 (MQ=255) tGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCGAAAATATTCAGAGCCATGCtt < 1:2440788/101‑1 (MQ=255) tGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCtt < 2:2441131/101‑1 (MQ=255) tGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCtt < 1:2440844/101‑1 (MQ=255) gACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCttt > 2:2441235/1‑101 (MQ=255) gACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCttt > 1:2441234/1‑101 (MQ=255) cGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCttttt > 1:2441238/1‑101 (MQ=255) cGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑ggggggg > 1:2441241/1‑43 (MQ=255) ggAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTg > 1:2441243/1‑101 (MQ=255) aaGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCg > 2:2441245/1‑101 (MQ=255) aGCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGt < 1:2440852/101‑1 (MQ=255) gCAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTg > 1:2441246/1‑101 (MQ=255) cAGATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTgg < 2:2440838/101‑1 (MQ=255) gATAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCt < 2:2440906/101‑1 (MQ=255) aTAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCtt < 2:2440879/101‑1 (MQ=255) aTAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCtt > 1:2441250/1‑101 (MQ=255) tAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCttt < 2:2440706/101‑1 (MQ=255) tAAAGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCttt < 2:2440721/101‑1 (MQ=255) aGCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATAATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGc > 2:2441252/1‑101 (MQ=255) gCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCa < 2:2440980/101‑1 (MQ=255) gCCTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCa > 1:2441254/1‑101 (MQ=255) cTTACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCATa > 2:2441257/1‑101 (MQ=255) ttACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCATAc < 2:2440777/101‑1 (MQ=255) ttACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCATAc > 2:2441259/1‑101 (MQ=255) tACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCa < 2:2440824/97‑1 (MQ=255) tACGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCATACa > 1:2441260/1‑101 (MQ=255) aCGCGAAGCGAAAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATg < 2:2440806/76‑1 (MQ=255) gcgaagcgaaAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCaa < 1:2440988/57‑1 (MQ=255) cgaagcgaaAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCATACAAttt < 1:2440771/101‑1 (MQ=255) aagcgaaAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCATACAATttat < 1:2441005/101‑1 (MQ=255) aagcgaaAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCATACAATttat < 2:2441012/101‑1 (MQ=255) agcgaaAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCATACAATttatt > 2:2441264/1‑101 (MQ=255) gcgaaAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCATACAATttatta < 1:2440920/101‑1 (MQ=255) gcgaaAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCATACAATttatta < 1:2440872/101‑1 (MQ=255) gaaAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCtttt < 1:2440847/84‑1 (MQ=255) gaaAAGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCATACAATTtattact > 1:2441265/1‑101 (MQ=255) aaaaGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAatat < 1:2440746/55‑1 (MQ=255) aaaaGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCt < 1:2440859/68‑1 (MQ=255) aaaaGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCATACAATttatt < 2:2441113/97‑1 (MQ=255) aaaGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCATACAATTtattactat < 2:2441045/101‑1 (MQ=255) aaGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCATACAATTtattactatt < 1:2440911/101‑1 (MQ=255) aaGCGAGGGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCATACAATTtattactatt < 1:2440893/101‑1 (MQ=255) | ATGACCATCAGTATTGGCACGGTTTTTTCAACGGGTGACACGCGTAATATCTCGCTTGTCATGACGGAAGCAGATAAAGCCTTACGCGAAGCGAAAAGCGA‑GGGGGGCAACAAAGTGATTATTCATCATATTTAAGTGCAAAAATATTCAGAGCCATGCTTTTTGCGTGGCTTTTGCATACAATTTATTACTATTA > NC_000913/1871726‑1871921 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |