| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | NC_000913 | 1,873,031 | IS1 (–) +9 bp | coding (991‑999/1491 nt) | dgcJ → | putative diguanylate cyclase DgcJ |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 291401 | NA (NA) | 268 (1.040) | 142/194 | 0.1 | 100% | noncoding (1/768 nt) | IS1 | repeat region |
| ? | NC_000913 | 1873031 = | 0 (0.000) | coding (991/1491 nt) | dgcJ | putative diguanylate cyclase DgcJ | |||||
| * | ? | NC_000913 | = 1873039 | 0 (0.000) | 243 (0.940) | 129/194 | 0.6 | 100% | coding (999/1491 nt) | dgcJ | putative diguanylate cyclase DgcJ |
| ? | NC_000913 | 1978503 = | NA (NA) | noncoding (768/768 nt) | IS1 | repeat region | |||||
Only 100 of 510 total aligned reads displayed.
TCGTGTCTCGTTATCCATTGATATTCTTTACTTTATCACGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGTATAATCGCAAAATTTTAACCCCTGAACTGGAGCA > NC_000913/1872931‑1873131 | gtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccc > 2:2578040‑M2/101‑101 (MQ=255)gtcagtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccc < 2:2577488‑M2/1‑1 (MQ=255) cGTGTCTCGTTATCCATTGATATTCTTTACTTTATCACGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCg > 2:2442612/1‑101 (MQ=255) cGTGTCTCGTTATCCATTGATATTCTTTACTTTATCACGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCg < 1:2442430/101‑1 (MQ=255) agtagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGa > 1:2442955‑M2/98‑101 (MQ=255) tagctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATg < 1:2577779‑M2/6‑1 (MQ=255) gctgaacaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCa < 1:2577529‑M2/8‑1 (MQ=255) gTTATCCATTGATATTCTTTACTTTATCACGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACg > 1:2442617‑M1/1‑100 (MQ=255) acaggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTcc < 1:2577575‑M2/13‑1 (MQ=255) tCCATTGATATTCTTTACTTTATCACGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaa > 2:2442622‑M1/1‑96 (MQ=255) tCCATTGATATTCTTTACTTTATCACGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaa < 2:2442422‑M1/101‑6 (MQ=255) ggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGtt < 2:2577632‑M2/16‑1 (MQ=255) ggagggacagctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGtt < 2:2577584‑M2/16‑1 (MQ=255) cATTGATATTCTTTACTTTATCACGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatg > 1:1374198‑M1/1‑94 (MQ=255) gATATTCTTTACTTTATCACGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactc < 2:2442366‑M1/101‑12 (MQ=255) atatTCTTTACTTTATCACGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactcc > 1:2442624‑M1/1‑89 (MQ=255) agctgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCaa > 1:2443179‑M2/78‑101 (MQ=255) tttactttaTCACGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaactta < 1:2442412‑M1/101‑19 (MQ=255) tgatagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAAt > 1:2442876‑M2/75‑101 (MQ=255) ttactttaTCACGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttat > 2:1374134‑M1/1‑82 (MQ=255) atagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAAtgt > 2:2443178‑M2/73‑101 (MQ=255) atagaaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAAtgt < 1:2577706‑M2/29‑1 (MQ=255) actttaTCACGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattg < 1:2442492‑M1/101‑22 (MQ=255) ttaTCACGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgata < 2:2442238‑M1/101‑25 (MQ=255) ttaTCACGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgata > 1:2442634‑M1/1‑77 (MQ=255) ttaTCACGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgata > 2:1374353‑M1/1‑77 (MQ=255) aaacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTcg < 2:27479‑M2/33‑1 (MQ=255) taTCACGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatag < 2:2442446‑M1/101‑26 (MQ=255) aacagaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTcgc < 1:27260‑M2/34‑1 (MQ=255) aTCACGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagt < 1:2442332‑M1/101‑27 (MQ=255) aTCACGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagt < 2:2442466‑M1/101‑27 (MQ=255) cACGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgt > 2:2442639‑M1/1‑73 (MQ=255) agaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCgag > 1:2443067‑M2/65‑101 (MQ=255) agaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCgag > 2:2443050‑M2/65‑101 (MQ=255) gaagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCgaga < 1:27657‑M2/38‑1 (MQ=255) cGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttt > 2:1374210‑M1/1‑71 (MQ=255) aagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGaa < 2:27175‑M2/39‑1 (MQ=255) aagccactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTCTATACCAAAATGTGTCGCGAGaa < 1:27440‑M2/39‑1 (MQ=255) gTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgtttt > 1:1374282‑M1/1‑70 (MQ=255) cTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttat > 1:2442642‑M1/1‑68 (MQ=255) cactggagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAata > 1:2443011‑M2/59‑101 (MQ=255) cGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgtt < 2:2442328‑M1/101‑37 (MQ=255) cGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgtt < 1:2442454‑M1/101‑37 (MQ=255) ggAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcag > 2:2442650‑M1/1‑62 (MQ=255) gagcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGt > 2:2442985‑M2/54‑101 (MQ=255) agcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTg < 1:27474‑M2/49‑1 (MQ=255) agcacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTg < 1:27560‑M2/49‑1 (MQ=255) aaaaGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagat > 1:2442652‑M1/1‑60 (MQ=255) cacctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGAt > 1:2442736‑M2/51‑101 (MQ=255) cctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGc < 2:27543‑M2/53‑1 (MQ=255) aGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataat < 2:2442518‑M1/101‑45 (MQ=255) aGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataat < 2:2442490‑M1/101‑45 (MQ=255) ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCg > 2:2442729‑M2/48‑101 (MQ=255) ctcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGAGGCg < 2:27367‑M2/54‑1 (MQ=255) tcaaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGa > 1:2442726‑M2/47‑101 (MQ=255) aaaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATg < 1:27096‑M2/57‑1 (MQ=255) aaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATga > 2:2442717‑M2/44‑101 (MQ=255) aaaacaccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATga > 1:2442718‑M2/44‑101 (MQ=255) ttctgGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatga > 1:371296‑M1/1‑48 (MQ=255) caccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATgactgg > 2:2442710‑M2/40‑101 (MQ=255) tctgGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgac < 2:1374662‑M1/101‑55 (MQ=255) ctgGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgact > 2:371293‑M1/1‑46 (MQ=255) ccatcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATgactggac < 2:27261‑M2/64‑1 (MQ=255) catcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATgactggact < 1:27213‑M2/65‑1 (MQ=255) aacatacactaaatcagtaagttggcagcatcaccCGGAt < 2:1373479‑M2/5‑1 (MQ=255) tcatacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGt > 2:2442703‑M2/35‑101 (MQ=255) gATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttg < 1:1374651‑M1/101‑59 (MQ=255) catacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGta > 1:2442701‑M2/34‑101 (MQ=255) catacactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGta < 2:27414‑M2/68‑1 (MQ=255) aTTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgt > 1:371288‑M1/1‑42 (MQ=255) tttGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtca < 2:1374645‑M1/101‑62 (MQ=255) ttGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcat > 1:371283‑M1/1‑39 (MQ=255) acactaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGTATaa > 2:2442696‑M2/31‑101 (MQ=255) actaaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGTATAATc < 1:27594‑M2/73‑1 (MQ=255) aCGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgca < 2:1374636‑M1/101‑66 (MQ=255) taaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGTATAATCGc > 1:2442687‑M2/27‑101 (MQ=255) cGGCGTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcag < 1:1374630‑M1/101‑67 (MQ=255) aaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGaa < 1:1373483‑M2/39‑1 (MQ=255) aaatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGTATAATCGCa > 2:2442686‑M2/26‑101 (MQ=255) aatcagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGTATAATCGCaa < 1:27368‑M2/77‑1 (MQ=255) gTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctcc > 1:4683529‑M1/1‑31 (MQ=255) gTTAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctcc > 2:1374159‑M1/1‑31 (MQ=255) ttAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctcca > 2:4683519‑M1/1‑30 (MQ=255) cagtaagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGTATAATCGCAAAAt > 2:2442679‑M2/22‑101 (MQ=255) tAATTTTGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccac > 1:4683606‑M1/1‑29 (MQ=255) taagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGTATAATCGCAAAAtttt < 2:27617‑M2/83‑1 (MQ=255) aagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGTATAATCGCAAAATTTTa < 2:27652‑M2/84‑1 (MQ=255) aagttggcagcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGTATAATCGCAAAATTTTa > 1:2442675‑M2/18‑101 (MQ=255) tttGCTGAATATGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgat < 2:1374609‑M1/101‑77 (MQ=255) tttGCTGAATATGGAGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgc > 2:4683275‑M1/1‑25 (MQ=255) tGCTGAATATGGTGCGGATGCACgggaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattt > 1:2576978‑M1/1‑23 (MQ=255) gcatcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGTATAATCGCAAAATTTTAACCCCTGaa > 2:2442667‑M2/9‑101 (MQ=255) atatGGTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaa < 1:1374592‑M1/101‑85 (MQ=255) catcaccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGTATAATCGCAAAATTTTAACCCCTGAAc > 1:2442666‑M2/8‑101 (MQ=255) ggTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcag < 1:1374692‑M1/52‑40 (MQ=255) gTGCGGATGCACggtaatgactccaacttattgatagtgttttatgttcagataatgcccgatgactttgtcatgcagctccaccgattttgagaacgaca < 2:1374579‑M1/101‑90 (MQ=255) ccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATgactgga < 2:27317‑M2/63‑1 (MQ=255) ccCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGTATAATCGCAAAATTTTAACCCCTGAACTGGAg < 2:27837‑M2/99‑1 (MQ=255) cCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGTATAATCGCAAAATTTTAACCCCTGAACTGGAGc > 2:2442657‑M2/2‑101 (MQ=255) cCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGTATAATCGCAAAATTTTAACCCCTGAACTGGAGc < 1:27769‑M2/100‑1 (MQ=255) | TCGTGTCTCGTTATCCATTGATATTCTTTACTTTATCACGTCTTCGTGGAAAAGCGTTCTGTTCTGGATTTTGACGGCGTTAATTTTGCTGAATATGGTGCGGATGCACTTCCGTTTATACCAAAATGTGTCGCGAGAAAATATTAGTGATGCGATGACTGGACTGTATAATCGCAAAATTTTAACCCCTGAACTGGAGCA > NC_000913/1872931‑1873131 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |