BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,401,052	T→C	E168E (GAA→GAG)	nuoF ←	NADH:quinone oxidoreductase subunit F

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,401,052	0	T	C	100.0%	971.1 / NA	238	E168E (GAA→GAG)	nuoF	NADH:quinone oxidoreductase subunit F
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (127/111); total (127/111)

Only 100 of 238 total aligned reads displayed.

GGCTTCGAGCGTGGGTTAGCACGACGTCCTTCCAGGGAGTTGATTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGTTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCGGCAATGGCACGGCGCAGATTAACTGCCGCTTCGATAT  >  NC_000913/2400954‑2401149

ggCTTCGAGCGTGGGTTAGCACGACGTCCTTCCAGGGAGTTGATTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCtc                                                                                                 <  1:3111189/101‑1 (MQ=255)

ggCTTCGAGCGTGGGTTAGCACGACGTCCTTCCAGGGAGTTGATTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCtc                                                                                                 <  2:3111215/101‑1 (MQ=255)

ggCTTCGAGCGTGGGTTAGCACGACGTCCTTCCAGGGAGTTGATTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCtc                                                                                                 <  1:3111342/101‑1 (MQ=255)

 gCTTCGAGCGTGGGTTAGCACGACGTCCTTCCAGGGAGTTGATTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCtcg                                                                                                <  1:3111201/101‑1 (MQ=255)

     cGAGCGTGGGTTAGCACGACGTCCTTCCAGGGAGTTGATTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCtcgaaat                                                                                            >  1:3111664/1‑101 (MQ=255)

      gAGCGTGGGTTAGCACGACGTCCTTCCAGGGAGTTGATTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCtcgaaatc                                                                                           >  2:3111665/1‑101 (MQ=255)

       aGCGTGGGTTAGCACGACGTCCTTCCAGGGAGTTGATTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCtcgaaatcg                                                                                          <  1:3111365/101‑1 (MQ=255)

        gCGTGGGTTAGCACGACGTCCTTCCAGGGAGTTGATTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCtcgaaatcga                                                                                         <  1:3111362/101‑1 (MQ=255)

         cGTGGGTTAGCACGACGTCCTTCCAGGGAGTTGATTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCtcgaaatcgaa                                                                                        >  2:3111668/1‑101 (MQ=255)

         cGTGGGTTAGCACGACGTCCTTCCAGGGAGTTGATTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCtc                                                                                                 >  1:3111669/1‑92 (MQ=255)

           tGGGTTAGCACGACGTCCTTCCAGGGAGTTGATTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAAc                                                                                      <  1:3111544/101‑1 (MQ=255)

           tGGGTTAGCACGACGTCCTTCCAGGGAGTTGATTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAAc                                                                                      >  1:3111672/1‑101 (MQ=255)

            gggTTAGCACGACGTCCTTCCAGGGAGTTGATTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAAcc                                                                                     <  2:3111271/101‑1 (MQ=255)

            gggTTAGCACGACGTCCTTCCAGGGAGTTGATTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAAcc                                                                                     >  1:3111675/1‑101 (MQ=255)

             ggTTAGCACGACGTCCTTCCAGGGAGTTGATTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCt                                                                                    >  2:3111676/1‑101 (MQ=255)

             ggTTAGCACGACGTCCTTCCAGGGAGTTGATTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCt                                                                                    <  1:3111401/101‑1 (MQ=255)

                tAGCACGACGTCCTTCCAGGGAGTTGATTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGtt                                                                                 >  1:3111681/1‑101 (MQ=255)

                tAGCACGACGTCCTTCCAGGGAGTTGATTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGtt                                                                                 >  2:3111680/1‑101 (MQ=255)

                    acgacgTCCTTCCAGGGAGTTGATTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCa                                                                             >  2:3111686/1‑101 (MQ=255)

                    acgacgTCCTTCCAGGGAGTTGATTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCa                                                                             >  1:3111685/1‑101 (MQ=255)

                      gacgTCCTTCCAGGGAGTTGATTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATa                                                                           >  1:3111692/1‑101 (MQ=255)

                      gacgTCCTTCCAGGGAGTTGATTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATa                                                                           <  2:3111455/101‑1 (MQ=255)

                        cgTCCTTCCAGGGAGTTGATTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAAt                                                                         >  2:3111693/1‑101 (MQ=255)

                        cgTCCTTCCAGGGAGTTGATTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAAt                                                                         <  2:3111395/101‑1 (MQ=255)

                         gTCCTTCCAGGGAGTTGATTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATg                                                                        <  1:3111368/101‑1 (MQ=255)

                         gTCCTTCCAGGGAGTTGATTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATg                                                                        >  1:3111696/1‑101 (MQ=255)

                          tCCTTCCAGGGAGTTGATTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGt                                                                       >  2:3111697/1‑101 (MQ=255)

                          tCCTTCCAGGGAGTTGATTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGt                                                                       >  2:3111699/1‑101 (MQ=255)

                           ccTTCCAGGGAGTTGATTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGtt                                                                      <  1:3111310/101‑1 (MQ=255)

                            cTTCCAGGGAGTTGATTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGttt                                                                     <  1:3111490/101‑1 (MQ=255)

                            cTTCCAGGGAGTTGATTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGttt                                                                     <  2:3111390/101‑1 (MQ=255)

                             ttCCAGGGAGTTGATTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGtttt                                                                    <  2:3111293/101‑1 (MQ=255)

                              tCCAGGGAGTTGATTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGttttt                                                                   <  2:3111461/101‑1 (MQ=255)

                              tCCAGGGAGTTGATTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGttttt                                                                   >  2:3111703/1‑101 (MQ=255)

                                   ggAGTTGATTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCaa                                                              <  2:3111160/101‑1 (MQ=255)

                                   ggAGTTGATTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCaa                                                              >  2:3111706/1‑101 (MQ=255)

                                     aGTTGATTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGc                                                            >  2:3111709/1‑101 (MQ=255)

                                     aGTTGATTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGc                                                            >  1:3111708/1‑101 (MQ=255)

                                     aGTTGATTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGc                                                            <  1:3111285/101‑1 (MQ=255)

                                      gTTGATTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCa                                                           <  1:3111456/101‑1 (MQ=255)

                                       ttGATTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAg                                                          <  1:3111227/101‑1 (MQ=255)

                                        tGATTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGa                                                         >  2:3111712/1‑101 (MQ=255)

                                         gATTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGAc                                                        >  1:3111714/1‑101 (MQ=255)

                                          aTTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGAcc                                                       >  1:3111717/1‑101 (MQ=255)

                                          aTTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGAcc                                                       <  2:3111327/101‑1 (MQ=255)

                                            tAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCg                                                     >  2:3111720/1‑101 (MQ=255)

                                            tAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCg                                                     >  1:3111721/1‑101 (MQ=255)

                                             aaCGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGc                                                    >  1:3111725/1‑101 (MQ=255)

                                              aCGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCt                                                   <  1:3111504/101‑1 (MQ=255)

                                                 cTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCg                                                >  2:3111727/1‑101 (MQ=255)

                                                 cTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCg                                                <  1:3111525/101‑1 (MQ=255)

                                                  tGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCtcgaaatcg                                                                                          >  1:3111729/1‑58 (MQ=255)

                                                  tGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCgg                                               <  1:3111230/101‑1 (MQ=255)

                                                   gTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGt                                              <  2:3111433/101‑1 (MQ=255)

                                                      tcttcCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGc                                           >  2:3111732/1‑101 (MQ=255)

                                                         tcCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGAcc                                                       <  2:3111518/86‑1 (MQ=255)

                                                         tcCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTc                                        >  2:3111735/1‑101 (MQ=255)

                                                         tcCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTc                                        >  1:3111737/1‑101 (MQ=255)

                                                         tcCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTc                                        <  2:3111474/101‑1 (MQ=255)

                                                          ccccGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCg                                       >  2:3111741/1‑101 (MQ=255)

                                                          ccccGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCg                                       >  1:3111740/1‑101 (MQ=255)

                                                          ccccGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCg                                       <  1:3111339/101‑1 (MQ=255)

                                                           cccGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCgg                                      <  1:3111269/101‑1 (MQ=255)

                                                             cGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCGGCa                                    <  1:3111591/101‑1 (MQ=255)

                                                              gCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCGGCaa                                   >  1:3111745/1‑101 (MQ=255)

                                                              gCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCGGCaa                                   <  1:3111385/101‑1 (MQ=255)

                                                               cAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCGGCAAt                                  >  1:3111747/1‑101 (MQ=255)

                                                               cAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCGGCAAt                                  <  1:3111158/101‑1 (MQ=255)

                                                                aGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCGGCAATg                                 <  1:3111328/101‑1 (MQ=255)

                                                                aGATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCGGCAATg                                 >  2:3111748/1‑101 (MQ=255)

                                                                 gATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCGGCAATgg                                <  1:3111394/101‑1 (MQ=255)

                                                                 gATGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCGGCAATgg                                >  2:3111750/1‑101 (MQ=255)

                                                                  aTGTAGCGCCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCGGCAATGGc                               >  2:3111754/1‑101 (MQ=255)

                                                                        cgcCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCGGCAATGGCACGgcg                         >  1:3111756/1‑101 (MQ=255)

                                                                        cgcCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCGGCAATGGCACGgcg                         >  2:3111757/1‑101 (MQ=255)

                                                                         gcCCTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCGGCAATGGCAc                             <  2:3111361/96‑1 (MQ=255)

                                                                          cccTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCGGCAATGGCACGGCGCa                       <  2:3111491/101‑1 (MQ=255)

                                                                           ccTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCGGCAATGGCACGGCTCAg                      <  1:3111411/101‑1 (MQ=255)

                                                                           ccTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCGGCAATGGCACGGCGCAg                      <  1:3111426/101‑1 (MQ=255)

                                                                           ccTGCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCGGCAATGGCACGGCGCAg                      >  1:3111761/1‑101 (MQ=255)

                                                                              gCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCGGCAATGGCACGGCGCAGAtt                   >  2:3111765/1‑101 (MQ=255)

                                                                              gCCCCGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCGGCAATGGCACGGCGCAGAtt                   >  1:3111764/1‑101 (MQ=255)

                                                                               ccccGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCGGCAATGGCACGGCGCAGATTa                  >  2:3111767/1‑101 (MQ=255)

                                                                                 ccGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCGGCAATGGCACg                            <  2:3111308/89‑1 (MQ=255)

                                                                                 ccGGTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCGGCAATGGCACGGCGCAGATTAAc                >  2:3111770/1‑101 (MQ=255)

                                                                                   ggTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCGGCAATGGCACGGCGCAGAt                    <  1:3111399/95‑1 (MQ=255)

                                                                                   ggTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCGGCAATGGCACGGCGCAGATTAACTg              >  1:3111773/1‑101 (MQ=255)

                                                                                    gTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCGGCAATGGCACGGCGCAGATTAACTGc             <  2:3111254/101‑1 (MQ=255)

                                                                                    gTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCGGCAATGGCACGGCGCAGATTAACTGc             <  1:3111422/101‑1 (MQ=255)

                                                                                    gTATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCGGCAATGGCACGGCGCAGATTAACTGc             <  1:3111381/101‑1 (MQ=255)

                                                                                     tATGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCGGCAATGGCACGGCGCAGATTAACTGcc            >  1:3111775/1‑101 (MQ=255)

                                                                                      aTGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCGGCAATGGCACGGCGCAGATTAACTGCCg           >  1:3111777/1‑101 (MQ=255)

                                                                                       tGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCGGCAATGGCACGGCGCAGATTAACTGCCGc          <  2:3111644/101‑1 (MQ=255)

                                                                                       tGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCGGCAATGGCACGGCGCAGATTAACTGCCGc          >  1:3111781/1‑101 (MQ=255)

                                                                                       tGGACGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCGGCAATGGCACGGCGCAGATTAACTGCCGc          >  2:3111783/1‑101 (MQ=255)

                                                                                           cGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCGGCAATGGCACGGCGCAGATTAACTGCCGCTTCg      >  1:3111785/1‑101 (MQ=255)

                                                                                           cGAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCGGCAATGGCACGGCGCAGATTAACTGCCGCTTCg      >  2:3111786/1‑101 (MQ=255)

                                                                                            gAACAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCGGCAATGGCACGGCGCAGATTAACTGCCGCTTCGa     <  2:3111593/101‑1 (MQ=255)

                                                                                             aaCAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCGGCAATGGCACGGCGCAGATTAACTGCCGCTTCGat    >  1:3111790/1‑101 (MQ=255)

                                                                                             aaCAGCTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCGGCAATGGCACGGCGCAGATTAACTGCCGCTTCGat    <  1:3111479/101‑1 (MQ=255)

GGCTTCGAGCGTGGGTTAGCACGACGTCCTTCCAGGGAGTTGATTAACGCTGTTTCTTCCCCGCAGATGTAGCGCCCTGCCCCGGTATGGACGAACAGTTCGAAATCGAAACCTGTTCCCATAATGTTTTTGCCAAGCAGACCCGCTTCGGTGGCTTCGGCAATGGCACGGCGCAGATTAACTGCCGCTTCGATAT  >  NC_000913/2400954‑2401149

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`