BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,765,694	G→A	A28V (GCA→GTA)	yfjM ←	CP4‑57 prophage; protein YfjM

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,765,694	0	G	A	100.0%	881.6 / NA	216	A28V (GCA→GTA)	yfjM	CP4‑57 prophage; protein YfjM
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (111/105); total (111/105)

Only 100 of 221 total aligned reads displayed.

TGCCTTGCCCATCCGGACCCCACTCCTTATAGCTCATCATGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCC  >  NC_000913/2765596‑2765791

tGCCTTGCCCATCCGGACCCCACTCCTTATAGCTCATCATGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGGCGTAGAATTTTTTCTTGTctact                                                                                                 <  2:3574223/101‑1 (MQ=255)

tGCCTTGCCCATCCGGACCCCACTCCTTATAGCTCATCATGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTctact                                                                                                 >  1:3574524/1‑101 (MQ=255)

  ccTTGCCCATCCGGACCCCACTCCTTATAGCTCATCATGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTgg                                                                                               <  2:3574107/101‑1 (MQ=255)

  ccTTGCCCATCCGGACCCCACTCCTTATAGCTCATCATGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTgg                                                                                               <  1:3574150/101‑1 (MQ=255)

  ccTTGCCCATCCGGACCCCACTCCTTATAGCTCATCATGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTgg                                                                                               >  1:3574528/1‑101 (MQ=255)

  ccTTGCCCATCCGGACCCCACTCCTTATAGCTCATCATGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTgg                                                                                               >  2:3574529/1‑101 (MQ=255)

   cTTGCCCATCCGGACCCCACTCCTTATAGCTCATCATGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGc                                                                                              <  1:3573862/101‑1 (MQ=255)

   cTTGCCCATCCGGACCCCACTCCTTATAGCTCATCATGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGc                                                                                              >  1:3574532/1‑101 (MQ=255)

    ttGCCCATCCGGACCCCACTCCTTATAGCTCATCATGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCg                                                                                             >  2:3574534/1‑101 (MQ=255)

     tGCCCATCCGGACCCCACTCCTTATAGCTCATCATGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGa                                                                                            <  2:3574117/101‑1 (MQ=255)

     tGCCCATCCGGACCCCACTCCTTATAGCTCATCATGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGa                                                                                            >  1:3574535/1‑101 (MQ=255)

      gCCCATCCGGACCCCACTCCTTATAGCTCATCATGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCg                                                                                             >  2:3574540/1‑99 (MQ=255)

      gCCCATCCGGACCCCACTCCTTATAGCTCATCATGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGaa                                                                                           <  2:3574055/101‑1 (MQ=255)

       cccATCCGGACCCCACTCCTTATAGCTCATCATGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGaat                                                                                          >  1:3574541/1‑101 (MQ=255)

        ccATCCGGACCCCACTCCTTATAGCTCATCATGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGaata                                                                                         <  2:3574096/101‑1 (MQ=255)

        ccATCCGGACCCCACTCCTTATAGCTCATCATGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGaata                                                                                         >  1:3574543/1‑101 (MQ=255)

          aTCCGGACCCCACTCCTTATAGCTCATCATGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGaataat                                                                                       >  2:3574546/1‑101 (MQ=255)

          aTCCGGACCCCACTCCTTATAGCTCATCATGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGaataat                                                                                       >  1:3574548/1‑101 (MQ=255)

           tCCGGACCCCACTCCTTATAGCTCATCATGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAAtt                                                                                      >  2:3574550/1‑101 (MQ=255)

            ccGGACCCCACTCCTTATAGCTCATCATGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTa                                                                                     <  2:3573918/101‑1 (MQ=255)

               gACCCCACTCCTTATAGCTCATCATGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTa                                                                                  <  2:3574159/101‑1 (MQ=255)

               gACCCCACTCCTTATAGCTCATCATGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTa                                                                                  >  2:3574555/1‑101 (MQ=255)

               gACCCCACTCCTTATAGCTCATCATGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTa                                                                                  >  1:3574554/1‑101 (MQ=255)

                aCCCCACTCCTTATAGCTCATCATGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTaa                                                                                 <  1:3574289/101‑1 (MQ=255)

                 ccccACTCCTTATAGCTCATCATGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAg                                                                                >  2:3574557/1‑101 (MQ=255)

                  cccACTCCTTATAGCTCATCATGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTaa                                                                                 <  1:3574110/99‑1 (MQ=255)

                   ccACTCCTTATAGCTCATCATGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTa                                                                              <  2:3574192/101‑1 (MQ=255)

                    cACTCCTTATAGCTCATCATGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTAt                                                                             >  1:3574559/1‑101 (MQ=255)

                         cTTATAGCTCATCATGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGt                                                                        >  2:3574563/1‑101 (MQ=255)

                         cTTATAGCTCATCATGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGt                                                                        <  2:3574213/101‑1 (MQ=255)

                          ttATAGCTCATCATGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGtt                                                                       >  1:3574565/1‑101 (MQ=255)

                          ttATAGCTCATCATGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGtt                                                                       <  1:3574169/101‑1 (MQ=255)

                          ttATAGCTCATCATGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGtt                                                                       <  1:3574349/101‑1 (MQ=255)

                          ttATAGCTCATCATGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGtt                                                                       <  1:3574235/101‑1 (MQ=255)

                            ataGCTCATCATGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTtgc                                                                     >  2:3574569/1‑101 (MQ=255)

                            ataGCTCATCATGATGGCTTGCTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTtgc                                                                     >  1:3574568/1‑101 (MQ=255)

                             taGCTCATCATGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTtgct                                                                    <  1:3574135/101‑1 (MQ=255)

                             taGCTCATCATGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTtgct                                                                    <  2:3574288/101‑1 (MQ=255)

                              aGCTCATCATGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTtgctg                                                                   <  1:3574225/101‑1 (MQ=255)

                                 tcatcaTGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCtt                                                                >  1:3574573/1‑101 (MQ=255)

                                 tcatcaTGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCtt                                                                >  2:3574571/1‑101 (MQ=255)

                                   atcatGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTgg                                                              >  1:3574575/1‑101 (MQ=255)

                                    tcatGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGt                                                             >  1:3574577/1‑101 (MQ=255)

                                    tcatGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGt                                                             <  2:3574361/101‑1 (MQ=255)

                                     catGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTctacttga                                                                                              >  1:3574580/1‑64 (MQ=255)

                                     catGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTg                                                            <  1:3574089/101‑1 (MQ=255)

                                     catGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTg                                                            <  1:3574398/101‑1 (MQ=255)

                                      atgatgGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTga                                                           <  1:3574178/101‑1 (MQ=255)

                                            gCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAg                                                     >  1:3574583/1‑101 (MQ=255)

                                            gCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAg                                                     <  1:3574274/101‑1 (MQ=255)

                                               tGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGaa                                                  <  2:3574130/101‑1 (MQ=255)

                                                gTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAag                                                 >  1:3574585/1‑101 (MQ=255)

                                                 ttttGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAaga                                                >  1:3574589/1‑101 (MQ=255)

                                                 ttttGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAaga                                                <  1:3574064/101‑1 (MQ=255)

                                                 ttttGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAaga                                                >  1:3574587/1‑101 (MQ=255)

                                                  tttGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAagag                                               <  2:3574018/101‑1 (MQ=255)

                                                   ttGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAgg                                              <  2:3574255/101‑1 (MQ=255)

                                                       gCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTAc                                          <  2:3573998/101‑1 (MQ=255)

                                                       gCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTAc                                          >  1:3574593/1‑101 (MQ=255)

                                                         tctctGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTgaga                                                         <  2:3574168/84‑1 (MQ=255)

                                                          ctctGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGaat                                                                                          <  2:3574272/50‑1 (MQ=255)

                                                           tctGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGaa                                      >  2:3574595/1‑101 (MQ=255)

                                                           tctGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGaa                                      <  2:3574230/101‑1 (MQ=255)

                                                            ctGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGaaa                                     >  1:3574597/1‑101 (MQ=255)

                                                            ctGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGaaa                                     <  2:3574198/101‑1 (MQ=255)

                                                            ctGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGaaa                                     >  2:3574598/1‑101 (MQ=255)

                                                             tGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAAc                                    <  2:3574327/101‑1 (MQ=255)

                                                              gCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACg                                   <  2:3574211/101‑1 (MQ=255)

                                                                  gTTCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTg                                                               <  1:3574133/69‑1 (MQ=255)

                                                                   ttCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGa                              >  2:3574602/1‑101 (MQ=255)

                                                                   ttCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGa                              >  1:3574603/1‑101 (MQ=255)

                                                                   ttCTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGa                              >  1:3574605/1‑101 (MQ=255)

                                                                     cTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGAca                            <  2:3574388/101‑1 (MQ=255)

                                                                     cTGTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGAca                            <  2:3574251/101‑1 (MQ=255)

                                                                       gTTTCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGAcatc                          >  2:3574609/1‑101 (MQ=255)

                                                                        tttCGACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGAcatca                         <  2:3574270/101‑1 (MQ=255)

                                                                            gACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATccc                     >  2:3574611/1‑101 (MQ=255)

                                                                            gACGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATccc                     >  1:3574612/1‑101 (MQ=255)

                                                                             aCGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTa                                                                                  <  2:3574244/39‑1 (MQ=255)

                                                                             aCGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATcccc                    >  1:3574614/1‑101 (MQ=255)

                                                                              cGTAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATccccc                   >  2:3574616/1‑101 (MQ=255)

                                                                                tAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCAt                 >  2:3574619/1‑101 (MQ=255)

                                                                                tAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCAt                 <  2:3574311/101‑1 (MQ=255)

                                                                                tAGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCAt                 >  1:3574620/1‑101 (MQ=255)

                                                                                 aGAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCAtt                <  1:3574417/101‑1 (MQ=255)

                                                                                  gAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGAcatc                          <  2:3574139/90‑1 (MQ=255)

                                                                                  gAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCAttt               >  1:3574623/1‑101 (MQ=255)

                                                                                  gAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCAttt               <  1:3574302/101‑1 (MQ=255)

                                                                                  gAATTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCAttt               >  2:3574625/1‑101 (MQ=255)

                                                                                   aaTTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCAtttt              <  1:3574321/101‑1 (MQ=255)

                                                                                   aaTTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCAtttt              <  2:3574111/101‑1 (MQ=255)

                                                                                    aTTTTTTCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTtg             >  2:3574628/1‑101 (MQ=255)

                                                                                     ttttttCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCAt                 >  1:3574629/1‑96 (MQ=255)

                                                                                      tttttCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTtgtg           <  1:3574049/101‑1 (MQ=255)

                                                                                      tttttCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTtgtg           <  1:3574283/101‑1 (MQ=255)

                                                                                         ttCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAg                                                     >  1:3574633/1‑56 (MQ=255)

                                                                                         ttCTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGAc        <  2:3574202/101‑1 (MQ=255)

                                                                                           cTTGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTg      >  2:3574635/1‑101 (MQ=255)

                                                                                            ttGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGc     >  1:3574636/1‑101 (MQ=255)

                                                                                             tGTCTACTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGcc    >  2:3574638/1‑101 (MQ=255)

TGCCTTGCCCATCCGGACCCCACTCCTTATAGCTCATCATGATGGCTTGTTTTGGGCTCTCTGCTCGTTCTGTTTCGACGTAGAATTTTTTCTTGTCTGCTGGCGAATAATTACTAAGTATCGAGTTGCTGCTTGGTGAGATCAGGAAGAGGTTACCGAAACGATGGACATCATCCCCCATTTTGTGGACTGCCCC  >  NC_000913/2765596‑2765791

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`