BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,339,507	T→C	I187V (ATT→GTT)	mlaF ←	intermembrane phospholipid transport system, ATP binding subunit MlaF

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,339,507	0	T	C	100.0%	1135.9 / NA	273	I187V (ATT→GTT)	mlaF	intermembrane phospholipid transport system, ATP binding subunit MlaF
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (122/151); total (122/151)

Only 100 of 273 total aligned reads displayed.

GCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACATGATGAGATCCGGCTCCAGCGCAATCGCACGCGCCAGC  >  NC_000913/3339410‑3339604

 ccAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGc                                                                                               <  2:4354116/101‑1 (MQ=255)

 ccAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGc                                                                                               >  2:4354570/1‑101 (MQ=255)

 ccAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGc                                                                                               <  1:4354157/101‑1 (MQ=255)

 ccAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGc                                                                                               >  1:4354572/1‑101 (MQ=255)

  cAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCt                                                                                              >  2:4354574/1‑101 (MQ=255)

   aGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCtt                                                                                             <  2:4354140/101‑1 (MQ=255)

   aGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCtt                                                                                             >  2:4354579/1‑101 (MQ=255)

    ggATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTc                                                                                            <  2:4354038/101‑1 (MQ=255)

      aTCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCAc                                                                                          >  2:4354584/1‑101 (MQ=255)

       tCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCAcc                                                                                         >  2:4354586/1‑101 (MQ=255)

        ccAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCa                                                                                        >  1:4354588/1‑101 (MQ=255)

          aGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGt                                                                                      >  1:4354592/1‑101 (MQ=255)

           ggCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTa                                                                                     <  2:4354265/101‑1 (MQ=255)

            gCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTAc                                                                                    <  2:4354391/101‑1 (MQ=255)

            gCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTAc                                                                                    <  1:4353908/101‑1 (MQ=255)

            gCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTAc                                                                                    >  1:4354595/1‑101 (MQ=255)

               tGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGcc                                                                                 >  1:4354600/1‑101 (MQ=255)

                gATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGccc                                                                                <  1:4354184/101‑1 (MQ=255)

                gATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGccc                                                                                >  2:4354601/1‑101 (MQ=255)

                 aTCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCa                                                                               >  2:4354607/1‑101 (MQ=255)

                 aTCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCa                                                                               >  1:4354605/1‑101 (MQ=255)

                 aTCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCa                                                                               <  2:4354342/101‑1 (MQ=255)

                  tCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCAt                                                                              >  1:4354611/1‑101 (MQ=255)

                    cGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATgg                                                                            >  2:4354615/1‑101 (MQ=255)

                     gCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGt                                                                           >  2:4354617/1‑101 (MQ=255)

                      cAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTg                                                                          >  2:1213035/1‑101 (MQ=255)

                      cAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTg                                                                          <  1:4354355/101‑1 (MQ=255)

                       aaTACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGa                                                                         <  2:4354197/101‑1 (MQ=255)

                       aaTACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGa                                                                         >  1:4354620/1‑101 (MQ=255)

                        aTACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGAt                                                                        >  2:4354621/1‑101 (MQ=255)

                        aTACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGAt                                                                        <  2:4354219/101‑1 (MQ=255)

                         tACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATg                                                                       <  1:4354076/101‑1 (MQ=255)

                         tACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATg                                                                       <  1:4354180/101‑1 (MQ=255)

                         tACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATg                                                                       <  1:4354227/101‑1 (MQ=255)

                          aCTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATgg                                                                      <  1:4354248/101‑1 (MQ=255)

                            ttAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGa                                                                    <  1:4354209/101‑1 (MQ=255)

                            ttAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGa                                                                    >  2:4354628/1‑101 (MQ=255)

                            ttAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGa                                                                    >  2:4354626/1‑101 (MQ=255)

                              aaCACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATc                                                                  >  1:4354629/1‑101 (MQ=255)

                              aaCACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATc                                                                  <  1:4354433/101‑1 (MQ=255)

                               acacTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCt                                                                 <  1:4354303/101‑1 (MQ=255)

                               acacTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCt                                                                 >  2:4354632/1‑101 (MQ=255)

                                cacTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCtt                                                                <  1:4354286/101‑1 (MQ=255)

                                  cTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCa                                                                                        <  2:4354176/75‑1 (MQ=255)

                                  cTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATg                                                                             <  1:4354233/86‑1 (MQ=255)

                                    tCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGccc                                                            >  1:4354636/1‑101 (MQ=255)

                                      cGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTg                                                               <  2:4354158/96‑1 (MQ=255)

                                      cGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCcaa                                                          >  2:4354638/1‑101 (MQ=255)

                                       ggCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTg                                                                          <  2:4354129/84‑1 (MQ=255)

                                       ggCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCcaac                                                         <  1:4354126/101‑1 (MQ=255)

                                         cacaTCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCcaacaa                                                       >  1:4354641/1‑101 (MQ=255)

                                           caTCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACaaaa                                                     <  2:4354509/101‑1 (MQ=255)

                                           caTCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACaaaa                                                     >  2:4354645/1‑101 (MQ=255)

                                           caTCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACaaaa                                                     <  2:4354315/101‑1 (MQ=255)

                                           caTCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACaaaa                                                     <  1:4354167/101‑1 (MQ=255)

                                            aTCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAg                                                    >  1:4354646/1‑101 (MQ=255)

                                              cGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGt                                                  >  2:4354649/1‑101 (MQ=255)

                                               gTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGtt                                                 >  1:4354651/1‑101 (MQ=255)

                                                 gagaAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTtca                                               <  2:4354224/101‑1 (MQ=255)

                                                       ccaccaCACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAAc                                         <  2:4354239/101‑1 (MQ=255)

                                                        caccacACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACa                                        >  2:4354657/1‑101 (MQ=255)

                                                        caccacACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACa                                        >  1:4354655/1‑101 (MQ=255)

                                                         accacACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACat                                       >  1:4354660/1‑101 (MQ=255)

                                                          ccacACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACatg                                      <  1:4354032/101‑1 (MQ=255)

                                                           cacacaAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACatga                                     <  1:4354217/101‑1 (MQ=255)

                                                               caAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACATGATgag                                 >  1:4354663/1‑101 (MQ=255)

                                                                aaGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACATGATgaga                                <  2:4354273/101‑1 (MQ=255)

                                                                aaGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACATGATgaga                                >  1:4354665/1‑101 (MQ=255)

                                                                 aGTCACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACATGATGAGAt                               <  1:4354189/101‑1 (MQ=255)

                                                                    cACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACATGATGAGATCCg                            >  1:4354669/1‑101 (MQ=255)

                                                                    cACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACATGATGAGATCCg                            <  1:4354238/101‑1 (MQ=255)

                                                                    cACGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACATGATGAGATCCg                            <  1:4354260/101‑1 (MQ=255)

                                                                     aCGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACATGATGAGATCCgg                           <  1:4354322/101‑1 (MQ=255)

                                                                      cGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACATGATGAGATCCGGc                          <  2:4354208/101‑1 (MQ=255)

                                                                      cGCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACATGATGAGATCCGGc                          <  2:4354259/101‑1 (MQ=255)

                                                                       gCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACATGATGAGATCCGGCt                         >  2:4354673/1‑101 (MQ=255)

                                                                       gCCCAGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACATGATGAGATCCGGCt                         >  1:4354672/1‑101 (MQ=255)

                                                                           aGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACATGATGAGATCCGGCTCCAg                     <  1:4354473/101‑1 (MQ=255)

                                                                           aGCGCGCTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACATGATGAGATCCGGCTCCAg                     <  1:4354279/101‑1 (MQ=255)

                                                                            gcgcgcTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACATGATGAGATCCGGCTCCAgc                    >  2:4354677/1‑101 (MQ=255)

                                                                            gcgcgcTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACATGATGAGATCCGGCTCCAgc                    >  2:4354679/1‑101 (MQ=255)

                                                                             cgcgcTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACATGATGAGATCCGGCTCCAgcg                   <  1:4354382/101‑1 (MQ=255)

                                                                                gcTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACATGATGAGATCCGGCTCCAg                     <  2:4354400/96‑1 (MQ=255)

                                                                                gcTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACATGATGAGATCCGGCTCCAGCGCaa                >  2:4354683/1‑101 (MQ=255)

                                                                                 cTGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACATGATGAGATCCGGCTCCAGCGCAAt               >  1:4354684/1‑101 (MQ=255)

                                                                                  tGTTCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACATGATGAGATCCGGCTCCAGCGCAATc              <  1:4354455/101‑1 (MQ=255)

                                                                                    ttCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACATGATGAGATCCg                            <  2:4354256/85‑1 (MQ=255)

                                                                                     tCAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACATGATGAGATCCGGCTCCAGCGCAATCGCa           <  1:4354584/101‑1 (MQ=255)

                                                                                      cAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACATGATGAGATCCGGCTCCa                      <  2:4354093/89‑1 (MQ=255)

                                                                                      cAGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACATGATGAGATCCGGCTCCAGCGCAATCGCAc          <  1:4354242/101‑1 (MQ=255)

                                                                                       aGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACatga                                     <  2:4354191/73‑1 (MQ=255)

                                                                                       aGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACATGATGAGATCCGGCTCCAGCGCAATCGCAcg         <  2:4354251/101‑1 (MQ=255)

                                                                                       aGCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACATGATGAGATCCGGCTCCAGCGCAATCGCAcg         >  1:4354688/1‑101 (MQ=255)

                                                                                        gCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACATGATGAGATCCGGCTCCAGCGCAATCGCAcgc        >  2:4354689/1‑101 (MQ=255)

                                                                                        gCTCAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACATGATGAGATCCGGCTCCAGCGCAATCGCAcgc        <  1:4354405/101‑1 (MQ=255)

                                                                                           cAGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACATGATGAGATCCGGCTCCAGCGCAATCGCACGCGcc     >  1:4354693/1‑101 (MQ=255)

                                                                                            aGAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACATGATGAGATCCGGCTCCAGCGCAATCGCACGCGCCa    <  2:4354284/101‑1 (MQ=255)

                                                                                             gAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACATGATGAGATCCGGCTCCAGCGCAATCGCACGCGCCAg   <  2:4354302/101‑1 (MQ=255)

                                                                                             gAAACCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACATGATGAGATCCGGCTCCAGCGCAATCGCACGCGCCAg   <  1:4354139/101‑1 (MQ=255)

                                                                                              aaaCCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACATGATGAGATCCGGCTCCAGCGCAATCGCACGCGCCAgc  <  2:4354374/101‑1 (MQ=255)

GCCAGGATCCAGGCGTGATCCGCAATACTTAACACTTCCGGCACATCGTGAGAAACCACCACACAAGTCACGCCCAGCGCGCTGTTCAGCTCAGAAATCAGCTTCACCAGTACGCCCATGGTGATGGGATCTTGCCCAACAAAAGGTTCATCAAACATGATGAGATCCGGCTCCAGCGCAATCGCACGCGCCAGC  >  NC_000913/3339410‑3339604

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`