BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,341,494	C→A	P77T (CCT→ACT)	kdsD →	D‑arabinose 5‑phosphate isomerase KdsD

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,341,494	0	C	A	100.0%	801.5 / NA	195	P77T (CCT→ACT)	kdsD	D‑arabinose 5‑phosphate isomerase KdsD
Reads supporting (aligned to +/- strand): ref base C (0/0); new base A (121/74); total (121/74)

Only 100 of 196 total aligned reads displayed.

ATGTTCTGGTGTAAAGGGAAAGTTGTCGTCATGGGGATGGGAAAATCGGGGCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACACCTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAGGATGTGGTGATTGCTATCTCTAACTCTGGTGAATC  >  NC_000913/3341398‑3341591

   ttCTGGTGTAAAGGGAAAGTTGTCGTCATGGGGATGGGAAAATCGGGGCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCAtt                                                                                            >  1:4357019/1‑101 (MQ=255)

      tGGTGTAAAGGGAAAGTTGTCGTCATGGGGATGGGAAAATCGGGGCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCAttttt                                                                                         <  1:4356683/101‑1 (MQ=255)

       ggTGTAAAGGGAAAGTTGTCGTCATGGGGATGGGAAAATCGGGGCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTc                                                                                        >  1:4357024/1‑101 (MQ=255)

       ggTGTAAAGGGAAAGTTGTCGTCATGGGGATGGGAAAATCGGGGCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTc                                                                                        <  2:4356694/101‑1 (MQ=255)

       ggTGTAAAGGGAAAGTTGTCGTCATGGGGATGGGAAAATCGGGGCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTc                                                                                        <  1:4356737/101‑1 (MQ=255)

         tgtAAAGGGAAAGTTGTCGTCATGGGGATGGGAAAATCGGGGCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGt                                                                                      >  2:4357025/1‑101 (MQ=255)

          gtAAAGGGAAAGTTGTCGTCATGGGGATGGGAAAATCGGGGCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTc                                                                                     >  1:4357026/1‑101 (MQ=255)

            aaaGGGAAAGTTGTCGTCATGGGGATGGGAAAATCGGGGCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCa                                                                                   >  1:4357029/1‑101 (MQ=255)

            aaaGGGAAAGTTGTCGTCATGGGGATGGGAAAATCGGGGCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCa                                                                                   >  2:4357030/1‑101 (MQ=255)

                 gAAAGTTGTCGTCATGGGGATGGGAAAATCGTGGCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTg                                                                              >  1:4357034/1‑101 (MQ=255)

                 gAAAGTTGTCGTCATGGGGATGGGAAAATCGGGGCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTg                                                                              >  1:4357032/1‑101 (MQ=255)

                  aaaGTTGTCGTCATGGGGATGGGAAAATCGGGGCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTgg                                                                             >  1:4357036/1‑101 (MQ=255)

                    aGTTGTCGTCATGGGGATGGGAAAATCGGGGCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTg                                                                           >  2:4357040/1‑101 (MQ=255)

                    aGTTGTCGTCATGGGGATGGGAAAATCGGGGCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTg                                                                           >  2:4357038/1‑101 (MQ=255)

                     gTTGTCGTCATGGGGATGGGAAAATCGGGGCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGa                                                                          <  1:4356761/101‑1 (MQ=255)

                      ttGTCGTCATGGGGATGGGAAAATCGGGGCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGaa                                                                         <  1:4356655/101‑1 (MQ=255)

                       tGTCGTCATGGGGATGGGAAAATCGGGGCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAg                                                                        >  2:4357042/1‑101 (MQ=255)

                       tGTCGTCATGGGGATGGGAAAATCGGGGCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAg                                                                        >  2:4357044/1‑101 (MQ=255)

                        gtcgtcATGGGGATGGGAAAATCGGGGCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGc                                                                       >  2:4357046/1‑101 (MQ=255)

                          cgtcATGGGGATGGGAAAATCGGGGCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCcg                                                                     >  1:4357048/1‑101 (MQ=255)

                          cgtcATGGGGATGGGAAAATCGGGGCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCcg                                                                     <  1:4356878/101‑1 (MQ=255)

                           gtcATGGGGATGGGAAAATCGGGGCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCcgc                                                                    <  1:4356646/101‑1 (MQ=255)

                             cATGGGGATGGGAAAATCGGGGCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTgg                                                                             >  2:4357050/1‑90 (MQ=255)

                              aTGGGGATGGGAAAATCGGGGCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCa                                                                 >  1:4357052/1‑101 (MQ=255)

                               tGGGGATGGGAAAATCGGGGCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCAt                                                                <  1:4356561/101‑1 (MQ=255)

                                ggggATGGGAAAATCGGGGCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATg                                                               <  2:4356772/101‑1 (MQ=255)

                                 gggATGGGAAAATCGGGGCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATgg                                                              >  2:4357055/1‑101 (MQ=255)

                                  ggATGGGAAAATCGGGGCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGt                                                             >  2:4357057/1‑101 (MQ=255)

                                   gATGGGAAAATCGGGGCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTg                                                            <  1:4356575/101‑1 (MQ=255)

                                     tGGGAAAATCGGGGCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGAt                                                          <  1:4356790/101‑1 (MQ=255)

                                      gggAAAATCGGGGCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGAtt                                                         >  1:4357058/1‑101 (MQ=255)

                                       ggAAAATCGGGGCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGAttt                                                        >  2:4357060/1‑101 (MQ=255)

                                       ggAAAATCGGGGCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGAttt                                                        <  1:4356768/101‑1 (MQ=255)

                                        gAAAATCGGGGCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTa                                                       >  2:4357064/1‑101 (MQ=255)

                                        gAAAATCGGGGCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTa                                                       <  1:4356599/101‑1 (MQ=255)

                                        gAAAATCGGGGCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTa                                                       >  2:4357062/1‑101 (MQ=255)

                                         aaaaTCGGGGCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATgg                                                              <  1:4356755/93‑1 (MQ=255)

                                          aaaTCGGGGCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAgg                                                     >  1:4357066/1‑101 (MQ=255)

                                            aTCGGGGCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCa                                                   >  1:4357069/1‑101 (MQ=255)

                                                gggCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGt                                               >  1:4357071/1‑101 (MQ=255)

                                                 ggCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGtt                                              >  2:4357072/1‑101 (MQ=255)

                                                  gCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTa                                             <  2:4356829/101‑1 (MQ=255)

                                                   cATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTAc                                            >  2:4357076/1‑101 (MQ=255)

                                                   cATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTAc                                            >  1:4357074/1‑101 (MQ=255)

                                                     tatTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTAccc                                          >  1:4357079/1‑101 (MQ=255)

                                                      atTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTAcccc                                         >  1:4357081/1‑101 (MQ=255)

                                                       ttGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCca                                        <  1:4356796/101‑1 (MQ=255)

                                                       ttGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCca                                        <  2:4356868/101‑1 (MQ=255)

                                                       ttGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCca                                        <  1:4356751/101‑1 (MQ=255)

                                                        tGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCcac                                       <  1:4356929/101‑1 (MQ=255)

                                                        tGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCcac                                       <  2:4356970/101‑1 (MQ=255)

                                                         gggCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCcaca                                      <  2:4356860/101‑1 (MQ=255)

                                                          ggCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGAtt                                                         >  1:4357083/1‑81 (MQ=255)

                                                          ggCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAg                                     <  2:4356783/101‑1 (MQ=255)

                                                           gCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAgg                                    >  2:4357084/1‑101 (MQ=255)

                                                           gCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAgg                                    <  2:4357010/101‑1 (MQ=255)

                                                            cGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTgg                                                                             >  2:4357087/1‑59 (MQ=255)

                                                              aaaaaTGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAGGAtg                                 >  2:4357089/1‑101 (MQ=255)

                                                                aaaTGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAGGAtgtg                               >  2:4357093/1‑101 (MQ=255)

                                                                aaaTGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAGGAtgtg                               >  2:4357091/1‑101 (MQ=255)

                                                                 aaTGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAGGATgtgg                              <  2:4356730/101‑1 (MQ=255)

                                                                 aaTGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAGGATgtgg                              <  2:4356688/101‑1 (MQ=255)

                                                                 aaTGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAGGATgtgg                              >  1:4357094/1‑101 (MQ=255)

                                                                  aTGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAGGATgtggt                             >  1:4357097/1‑101 (MQ=255)

                                                                  aTGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAGGATgtgg                              >  2:4357098/1‑100 (MQ=255)

                                                                   tGGCGGCAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAGGAtgtg                               >  2:4357101/1‑98 (MQ=255)

                                                                    ggcggcAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAGGATGTGGTGa                           >  1:4357102/1‑101 (MQ=255)

                                                                     gcggcAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAGGATGTGGTGAt                          <  1:4356823/101‑1 (MQ=255)

                                                                      cggcAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAGGATGTGGTGAtt                         >  1:4357105/1‑101 (MQ=255)

                                                                       ggcAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAGGATGTGGTGATTg                        <  1:4356732/101‑1 (MQ=255)

                                                                        gcAACGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAGGATGTGGTGATTGc                       >  1:4357107/1‑101 (MQ=255)

                                                                          aaCGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTCCCCCACAGGATGTGGTGATTGCTa                     <  2:4356527/101‑1 (MQ=255)

                                                                          aaCGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAGGATGTGGTGATTGCTa                     >  2:4357108/1‑101 (MQ=255)

                                                                          aaCGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAGGATGTGGTGATTGCTa                     >  2:4357110/1‑101 (MQ=255)

                                                                          aaCGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAGGATGTGGTGATTGCTa                     >  1:4357112/1‑101 (MQ=255)

                                                                            cGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAGGATGTGGTGATTGCTAtc                   <  1:4356787/101‑1 (MQ=255)

                                                                            cGTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAGGATGTGGTGATTGCTAtc                   >  1:4357115/1‑101 (MQ=255)

                                                                             gTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAGGATGTGGTGATTGCTAtct                  >  2:4357118/1‑101 (MQ=255)

                                                                             gTTTGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAGGATGTGGTGATTGCTAtct                  >  1:4357117/1‑101 (MQ=255)

                                                                               ttGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAGGATGTGGTGATTGCTATctct                >  1:4357120/1‑101 (MQ=255)

                                                                               ttGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAGGATGTGGTGATTGCTATctct                <  1:4356777/101‑1 (MQ=255)

                                                                               ttGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAGGATGTGGTGATTGCTATctct                <  1:4356831/101‑1 (MQ=255)

                                                                                tGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAGGATGTGGTGATTGCTATCTCTa               >  1:4357123/1‑101 (MQ=255)

                                                                                tGCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAGGATGTGGTGATTGCTATCTCTa               >  1:4357121/1‑101 (MQ=255)

                                                                                 gCCAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAGGATGTGGTGATTGCTATCTCTaa              <  1:4356804/101‑1 (MQ=255)

                                                                                  ccAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAGGATgtgg                              >  1:4357125/1‑84 (MQ=255)

                                                                                  ccAGCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAGGATGTGGTGATTGCTATCTCTAAc             <  1:4356616/101‑1 (MQ=255)

                                                                                     gCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAg                                                                        >  2:4357130/1‑39 (MQ=255)

                                                                                     gCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAGGATGTGGTGATTGCTATCTCTAActct          >  2:4357127/1‑101 (MQ=255)

                                                                                     gCACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAGGATGTGGTGATTGCTATCTCTAActct          <  1:4356816/101‑1 (MQ=255)

                                                                                      cACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAGGATGTGGTGATTGCTATCTCTAACTCTg         <  2:4356881/101‑1 (MQ=255)

                                                                                      cACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAGGATGTGGTGATTGCTATCTCTAACTCTg         <  1:4356911/101‑1 (MQ=255)

                                                                                      cACCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAGGATGTGGTGATTGCTATCTCTAACTCTg         >  1:4357131/1‑101 (MQ=255)

                                                                                       aCCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAGGATGTGGTGATTGCTATCTCTAACTCTgg        <  1:4357046/101‑1 (MQ=255)

                                                                                       aCCGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAGGATGTGGTGATTGCTATCTCTAACTCTgg        <  2:4356767/101‑1 (MQ=255)

                                                                                        ccGGTACAACTTCATTTTTCGTGCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAGGATGTGGTGATTGCTATCTCTAACTCTGGt       >  2:4357133/1‑101 (MQ=255)

                                                                                         cGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAGGATGTGGTGATTGCTATCTCTAACTCTGGTg      >  2:4357135/1‑101 (MQ=255)

                                                                                         cGGTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAGGATGTGGTGATTGCTATCTCTAACTCTGGTg      <  2:4356810/101‑1 (MQ=255)

                                                                                           gTACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAGGATGTGGTGATTGCTATCTCTAACTCTGGTGaa    >  2:4357137/1‑101 (MQ=255)

                                                                                            tACAACTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAGGATGTGGTGATTGCTATCTCTAACTCTGGTGAAt   >  1:4357140/1‑101 (MQ=255)

ATGTTCTGGTGTAAAGGGAAAGTTGTCGTCATGGGGATGGGAAAATCGGGGCATATTGGGCGAAAAATGGCGGCAACGTTTGCCAGCACCGGTACACCTTCATTTTTCGTCCATCCTGGTGAAGCCGCGCATGGTGATTTAGGCATGGTTACCCCACAGGATGTGGTGATTGCTATCTCTAACTCTGGTGAATC  >  NC_000913/3341398‑3341591

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`