BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,492,250	A→G	S16S (TCT→TCC)	ppiA ←	peptidyl‑prolyl cis‑trans isomerase A

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,492,250	0	A	G	100.0%	729.8 / NA	179	S16S (TCT→TCC)	ppiA	peptidyl‑prolyl cis‑trans isomerase A
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (96/83); total (96/83)

Only 100 of 209 total aligned reads displayed.

GCTTTTTGTTTATCCAGCTCCAGTTCGATGTTACCAGCTGAGGTTGTCAACAATACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCAGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCTTAACAAACAGAGCAGAAAAAAAGCAAGTGAAGAGATTCTA  >  NC_000913/3492152‑3492347

gcTTTTTGTTTATCCAGCTCCAGTTCGATGTTACCAGCTGAGGTTGTCAACAATACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGagaaagagcgga                                                                                                 >  1:4559060/1‑101 (MQ=255)

  tttttGTTTATCCAGCTCCAGTTCGATGTTACCAGCTGAGGTTGTCAACAATACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGagaaagagcggaaa                                                                                               >  1:4559065/1‑101 (MQ=255)

  tttttGTTTATCCAGCTCCAGTTCGATGTTACCAGCTGAGGTTGTCAACAATACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGagaaagagcggaaa                                                                                               >  2:4559062/1‑101 (MQ=255)

  tttttGTTTATCCAGCTCCAGTTCGATGTTACCAGCTGAGGTTGTCAACAATACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGagaaagagcggaaa                                                                                               <  1:4558539/101‑1 (MQ=255)

    tttGTTTATCCAGCTCCAGTTCGATGTTACCAGCCGAGGTTGTCAACAATACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGagaaagagcggaaaga                                                                                             >  2:4559066/1‑101 (MQ=255)

      tGTTTATCCAGCTCCAGTTCGATGTTACCAGCTGAGGTTGTCAACAATACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGagaaagagcggaaagagc                                                                                           <  2:4558779/101‑1 (MQ=255)

         ttATCCAGCTCCAGTTCGATGTTACCAGCTGAGGTTGTCAACAATACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGaa                                                                                        >  1:4559071/1‑101 (MQ=255)

           aTCCAGCTCCAGTTCGATGTTACCAGCTGAGGTTGTCAACAATACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGaaaa                                                                                      >  1:4559073/1‑101 (MQ=255)

            tCCAGCTCCAGTTCGATGTTACCAGCTGAGGTTGTCAACAATACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAAc                                                                                     >  1:4559076/1‑101 (MQ=255)

             ccAGCTCCAGTTCGATGTTACCAGCTGAGGTTGTCAACAATACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAAca                                                                                    <  2:4558752/101‑1 (MQ=255)

             ccAGCTCCAGTTCGATGTTACCAGCTGAGGTTGTCAACAATACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAAca                                                                                    >  2:4559077/1‑101 (MQ=255)

              cAGCTCCAGTTCGATGTTACCAGCTGAGGTTGTCAACAATACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAAcag                                                                                   <  2:4558545/101‑1 (MQ=255)

               aGCTCCAGTTCGATGTTACCAGCTGAGGTTGTCAACAATACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAAcag                                                                                   >  2:4559080/1‑100 (MQ=255)

                  tCCAGTTCGATGTTACCAGCTGAGGTTGTCAACAATACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACagcagc                                                                               >  2:4559085/1‑101 (MQ=255)

                  tCCAGTTCGATGTTACCAGCTGAGGTTGTCAACAATACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACagcagc                                                                               >  1:4559084/1‑101 (MQ=255)

                    cAGTTCGATGTTACCAGCTGAGGTTGTCAACAATACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAAcagca                                                                                 <  2:4558771/97‑1 (MQ=255)

                    cAGTTCGATGTTACCAGCTGAGGTTGTCAACAATACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCa                                                                             <  2:4558748/101‑1 (MQ=255)

                     aGTTCGATGTTACCAGCTGAGGTTGTCAACAATACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGcc                                                                              <  1:4558903/99‑1 (MQ=255)

                     aGTTCGATGTTACCAGCTGAGGTTGTCAACAATACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCAt                                                                            >  2:4559089/1‑101 (MQ=255)

                     aGTTCGATGTTACCAGCTGAGGTTGTCAACAATACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCAt                                                                            >  1:4559088/1‑101 (MQ=255)

                      gTTCGATGTTACCAGCTGAGGTTGTCAACAATACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATc                                                                           <  1:4558705/101‑1 (MQ=255)

                          gATGTTACCAGCTGAGGTTGTCAACAATACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATcgccg                                                                       >  1:4559093/1‑101 (MQ=255)

                          gATGTTACCAGCTGAGGTTGTCAACAATACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATcgccg                                                                       <  1:4558740/101‑1 (MQ=255)

                           aTGTTACCAGCTGAGGTTGTCAACAATACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATcgccgc                                                                      >  1:4559095/1‑101 (MQ=255)

                           aTGTTACCAGCTGAGGTTGTCAACAATACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATcgccgc                                                                      >  2:4559096/1‑101 (MQ=255)

                             gTTACCAGCTGAGGTTGTCAACAATACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCa                                                                    >  2:4559099/1‑101 (MQ=255)

                             gTTACCAGCTGAGGTTGTCAACAATACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCa                                                                    <  1:4558681/101‑1 (MQ=255)

                               tACCAGCTGAGGTTGTCAACAATACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAgg                                                                  <  1:4559009/101‑1 (MQ=255)

                               tACCAGCTGAGGTTGTCAACAATACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAgg                                                                  >  2:4559101/1‑101 (MQ=255)

                                  cAGCTGAGGTTGTCAACAATACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTc                                                               >  1:4559104/1‑101 (MQ=255)

                                  cAGCTGAGGTTGTCAACAATACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGCGTc                                                               <  1:4558841/101‑1 (MQ=255)

                                  cAGCTGAGGTTGTAAACAATACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTc                                                               >  2:4559103/1‑101 (MQ=255)

                                   aGCTGAGGTTGTCAACAATACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCg                                                              >  2:4559106/1‑101 (MQ=255)

                                     cTGAGGTTGTCAACAATACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGAt                                                            <  2:4558810/101‑1 (MQ=255)

                                       gAGGTTGTCAACAATACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGAttt                                                          <  2:4558839/101‑1 (MQ=255)

                                        aGGTTGTCAACAATACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTg                                                         >  1:4559108/1‑101 (MQ=255)

                                         ggTTGTCAACAATACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCa                                                                             >  2:4559110/1‑80 (MQ=255)

                                         ggTTGTCAACAATACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGa                                                        <  2:4558880/101‑1 (MQ=255)

                                           ttGTCAACAATACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAAc                                                      >  2:4559112/1‑101 (MQ=255)

                                            tGTCAACAATACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACa                                                     >  2:4559114/1‑101 (MQ=255)

                                              tCAACAATACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATg                                                   <  1:4558750/101‑1 (MQ=255)

                                               caacaaTACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATga                                                  >  1:4559116/1‑101 (MQ=255)

                                               caacaaAACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATga                                                  <  1:4558804/101‑1 (MQ=255)

                                                aacaaTACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATgag                                                 <  2:4558819/101‑1 (MQ=255)

                                                aacaaTACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATgag                                                 <  2:4558716/101‑1 (MQ=255)

                                                    aTACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGAttt                                             >  2:4559119/1‑101 (MQ=255)

                                                    aTACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGAttt                                             >  2:4559121/1‑101 (MQ=255)

                                                     tACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTc                                            <  1:4558640/101‑1 (MQ=255)

                                                     tACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTc                                            <  2:4558725/101‑1 (MQ=255)

                                                     tACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTc                                            <  2:4558850/101‑1 (MQ=255)

                                                        gTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAAc                                                      <  2:4558896/88‑1 (MQ=255)

                                                        gTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCtt                                         >  1:4559124/1‑101 (MQ=255)

                                                         tGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCTTa                                        <  2:4558791/101‑1 (MQ=255)

                                                         tGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCTTa                                        <  1:4558854/101‑1 (MQ=255)

                                                         tGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCTTa                                        >  2:4559125/1‑101 (MQ=255)

                                                           cGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCTTaac                                      <  2:4558738/101‑1 (MQ=255)

                                                            gggTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCt                                          <  2:4558693/96‑1 (MQ=255)

                                                            gggTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCTTaaca                                     >  1:4559128/1‑101 (MQ=255)

                                                              gTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCTTaacaaa                                   >  2:4559130/1‑101 (MQ=255)

                                                              gTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCTTaacaaa                                   <  1:4558755/101‑1 (MQ=255)

                                                                ccccTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCTTaacaaaca                                 <  2:4558708/101‑1 (MQ=255)

                                                                ccccTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCTTaacaaaca                                 <  2:4558789/101‑1 (MQ=255)

                                                                 cccTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGcc                                                                              <  1:4558761/55‑1 (MQ=255)

                                                                  ccTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAggg                                                                 >  1:4559135/1‑67 (MQ=255)

                                                                  ccTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATg                                                   <  1:4558778/81‑1 (MQ=255)

                                                                  ccTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCTTAACAAACaga                               <  2:4558827/101‑1 (MQ=255)

                                                                  ccTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCTTAACAAACaga                               <  2:4558864/101‑1 (MQ=255)

                                                                  ccTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCTTAACAAACaga                               >  2:4559133/1‑101 (MQ=255)

                                                                   cTTTCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCTTAACAAACagag                              >  2:4559136/1‑101 (MQ=255)

                                                                    tttCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCTTAACAAACAGAGc                             >  1:4559138/1‑101 (MQ=255)

                                                                    tttCGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCTTAACAAACAGAGc                             >  2:4559140/1‑101 (MQ=255)

                                                                       cGCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCTTAACAAACAGAGCAGa                          <  1:4558664/101‑1 (MQ=255)

                                                                        gCTGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCTTAACAAACAGAGCAGaa                         >  2:4559143/1‑101 (MQ=255)

                                                                          tGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCtt                                         <  2:4558877/83‑1 (MQ=255)

                                                                          tGCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCTTAACAAACAGAGCAGaaaa                       >  1:4559145/1‑101 (MQ=255)

                                                                           gCCATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCTTAACAAACAGAGCAGaaaaa                      <  1:4558826/101‑1 (MQ=255)

                                                                            ccATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCTTAACAAACAGAGCAGaaaaaa                     >  2:4559150/1‑101 (MQ=255)

                                                                            ccATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCTTAACAAACAGAGCAGaaaaaa                     >  1:4559149/1‑101 (MQ=255)

                                                                            ccATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCTTAACAAACAGAGCAGaaaaaa                     >  1:4559147/1‑101 (MQ=255)

                                                                            ccATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCTTAACAAACAGAGCAGaaaaaa                     <  1:4558917/101‑1 (MQ=255)

                                                                             cATTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCTTAACAAACAGAGCAGaaaaaaa                    >  2:4559153/1‑101 (MQ=255)

                                                                              aTTGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGaa                                                       <  2:4558634/65‑1 (MQ=255)

                                                                               ttGCTGCGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCTTAACAAACAGAGCAGAAAAAAAGc                  <  2:4558800/101‑1 (MQ=255)

                                                                                tgctgcGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCTTAACAAACAGAGCAGAAAAAAAGCa                 >  2:4559155/1‑101 (MQ=255)

                                                                                 gctgcGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCTTAACAAACAGAGCAGAAAAAAAGCaa                >  1:4559157/1‑101 (MQ=255)

                                                                                   tgcGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCTTAACAAACAGAGCAGaaaaaa                     <  1:4558836/94‑1 (MQ=255)

                                                                                    gcGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCTTAACAAACAGAGCAGAAAAAAAGCAAGTg             >  1:4559159/1‑101 (MQ=255)

                                                                                     cGGGAGAAAGAGCGGAAAGAGCTAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCTTAACAAACAGAGCAGAAAAAAAGCAAGTGa            >  1:4559163/1‑101 (MQ=255)

                                                                                     cGGGAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCTTAACAAACAGAGCAGAAAAAAAGCAAGTGa            >  2:4559160/1‑101 (MQ=255)

                                                                                      gggAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCTTAACAAACAGAGCAGAAAAAAAGCAAGTGaa           <  1:4558884/101‑1 (MQ=255)

                                                                                      gggAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCTTAACAAACAGAGCAGAAAAAAAGCAAGTGa            <  1:4558723/100‑1 (MQ=255)

                                                                                       ggAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCTTAACAAACAGAGCAGAAAAAAAGCAAGTGAag          >  1:4559166/1‑101 (MQ=255)

                                                                                       ggAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCTTAACAAACAGAGCAGAAAAAAAGCAAGTGAag          <  2:4558885/101‑1 (MQ=255)

                                                                                       ggAGAAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCTTAACAAACAGAGCAGAAAAAAAGCAAGTGAag          >  2:4559165/1‑101 (MQ=255)

                                                                                        gagaAAGAGCGGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCTTAACAAACAGAGCAGAAAAAAAGCAAGTGAaga         >  2:4559168/1‑101 (MQ=255)

                                                                                          gaaagagcggaaagagcgAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCTTAACAAACAGAGCAGAAAAAAAGCAAGTGAAgaga       <  1:4558862/101‑1 (MQ=255)

                                                                                           aaagagcggaaagagcGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCTTAACAAACAGAGCAGAAAAAAAGCAAGTGAAGAGAt      <  1:4558959/101‑1 (MQ=255)

                                                                                           aaagagcggaaagagcGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCTTAACAAACAGAGCAGAAAAAAAGCAAGTGAAGAGAt      <  2:4559071/101‑1 (MQ=255)

                                                                                            aagagcggaaagagcGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCTTAACAAACAGAGCAGAAAAAAAGCAAGTGAAGAGAtt     <  2:4558607/101‑1 (MQ=255)

                                                                                             agagcggaaagagcGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCTTAACAAACAGAGCAGAAAAAAAGCAAGTGAAGAGATTc    >  1:4559173/1‑101 (MQ=255)

GCTTTTTGTTTATCCAGCTCCAGTTCGATGTTACCAGCTGAGGTTGTCAACAATACGTGCGGGTCCCCTTTCGCTGCCATTGCTGCGGGAGAAAGAGCAGAAAGAGCGAAAACAGCAGCCATCGCCGCCAGGGTCGATTTGAACATGAGATTTCCTTAACAAACAGAGCAGAAAAAAAGCAAGTGAAGAGATTCTA  >  NC_000913/3492152‑3492347

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`