Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,443,868 C→T A496V (GCC→GTC)  tamA → translocation and assembly module subunit TamA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,443,8680CT99.6% 1102.2 / NA 277A496V (GCC→GTC) tamAtranslocation and assembly module subunit TamA
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base T (142/134);  minor base A (1/0);  total (143/134)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 281 total aligned reads displayed.

GCCGGATCTGCGTTTCTTCGCCGGGGGCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGCCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGTAAGCGAT  >  NC_000913/4443770‑4443965
                                                                                                  |                                                                                                 
gccgGATCTGCGTTTCTTCGCCGGGGGCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCt                                                                                                 >  1:5877790/1‑101 (MQ=255)
gccgGATCTGCGTTTCTTCGCCGGGGGCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCt                                                                                                 <  2:5877357/101‑1 (MQ=255)
gccgGATCTGCGTTTCTTCGCCGGGGGCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCt                                                                                                 >  2:5877792/1‑101 (MQ=255)
 ccgGATCTGCGTTCCTTCGCCGGGGGCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGtctc                                                                                                <  2:5877345/101‑1 (MQ=255)
  cgGATCTGCGTTTCTTCGCCGGGGGCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCg                                                                                               <  1:5877164/101‑1 (MQ=255)
   ggATCTGCGTTTCTTCGCCGGGGGCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGa                                                                                              >  1:5877797/1‑101 (MQ=255)
    gATCTGCGTTTCTTCGCCGGGGGCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGaa                                                                                             <  2:5877470/101‑1 (MQ=255)
      tCTGCGTTTCTTCGCCGGGGGCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGt                                                                                           <  2:5877395/101‑1 (MQ=255)
          cGTTTCTTCGCCGGGGGCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGAt                                                                                       <  1:5877240/101‑1 (MQ=255)
            tttCTTCGCCGGGGGCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATaa                                                                                     >  2:5877802/1‑101 (MQ=255)
              tcttcGCCGGGGGCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATa                                                                                      >  1:5877806/1‑98 (MQ=255)
              tcttcGCCGGGGGCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAAcc                                                                                   >  2:5877805/1‑101 (MQ=255)
              tcttcGCCGGGGGCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAAcc                                                                                   <  1:5877514/101‑1 (MQ=255)
                 tcGCCGGGGGCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGa                                                                                <  2:5877452/101‑1 (MQ=255)
                 tcGCCGGGGGCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGa                                                                                >  2:5877811/1‑101 (MQ=255)
                  cGCCGGGGGCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGAt                                                                               <  1:5877325/101‑1 (MQ=255)
                  cGCCGGGGGCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGAt                                                                               <  2:5877382/101‑1 (MQ=255)
                   gCCGGGGGCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATc                                                                              <  1:5877614/101‑1 (MQ=255)
                   gCCGGGGGCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATc                                                                              >  1:5877814/1‑101 (MQ=255)
                   gCCGGGGGCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATc                                                                              <  1:5877427/101‑1 (MQ=255)
                   gCCGGGGGCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATc                                                                              <  2:5877534/101‑1 (MQ=255)
                   gCCGGGGGCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATc                                                                              <  2:5877582/101‑1 (MQ=255)
                    ccGGGGGCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCg                                                                             <  1:5877401/101‑1 (MQ=255)
                    ccGGGGGCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCg                                                                             >  2:5877815/1‑101 (MQ=255)
                     cGGGGGCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGc                                                                            <  2:5877556/101‑1 (MQ=255)
                     cGGGGGCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGc                                                                            >  1:5877818/1‑101 (MQ=255)
                      gggggCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCt                                                                           >  2:5877822/1‑101 (MQ=255)
                      gggggCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCt                                                                           >  1:5877820/1‑101 (MQ=255)
                       ggggCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTg                                                                          <  2:5877139/101‑1 (MQ=255)
                       ggggCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTg                                                                          <  1:5877469/101‑1 (MQ=255)
                            gACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATa                                                                     <  2:5877499/101‑1 (MQ=255)
                            gACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATa                                                                     <  2:5877371/101‑1 (MQ=255)
                            gACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATa                                                                     >  1:5877825/1‑101 (MQ=255)
                             aCCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATAc                                                                    <  1:5877606/101‑1 (MQ=255)
                               cGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCa                                                                  >  2:5877828/1‑101 (MQ=255)
                               cGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCa                                                                  <  2:5877510/101‑1 (MQ=255)
                                 cAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGt                                                                >  1:5877833/1‑101 (MQ=255)
                                 cAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGt                                                                >  2:5877832/1‑101 (MQ=255)
                                 cAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGt                                                                <  2:5877567/101‑1 (MQ=255)
                                  aGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTa                                                               >  2:5877835/1‑101 (MQ=255)
                                   gTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTAc                                                              <  1:5877491/101‑1 (MQ=255)
                                    tATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACa                                                             >  1:5877839/1‑101 (MQ=255)
                                     aTTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACaa                                                            <  1:5877368/101‑1 (MQ=255)
                                      ttCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAAc                                                           <  1:5877520/101‑1 (MQ=255)
                                       tCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACg                                                          >  2:5877843/1‑101 (MQ=255)
                                         gTGGCTACAAATACAAATCTATCGCTCCGAAATACGTCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTg                                                        >  1:5877846/1‑101 (MQ=255)
                                         gTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTg                                                        <  1:5877281/101‑1 (MQ=255)
                                            gCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGAcc                                                     >  2:5877849/1‑101 (MQ=255)
                                             cTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCg                                                    >  1:5877850/1‑101 (MQ=255)
                                             cTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCg                                                    <  2:5877404/101‑1 (MQ=255)
                                               acaaatacaaatCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGa                                                  <  2:5877524/101‑1 (MQ=255)
                                                caaatacaaatCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGaa                                                 >  1:5877855/1‑101 (MQ=255)
                                                caaatacaaatCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGaa                                                 <  1:5877454/101‑1 (MQ=255)
                                                caaatacaaatCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGaa                                                 <  1:5877414/101‑1 (MQ=255)
                                                 aaatacaaatCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGaaa                                                <  2:5877282/101‑1 (MQ=255)
                                                 aaatacaaatCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGaaa                                                >  2:5877856/1‑101 (MQ=255)
                                                    tacaaatCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAAtg                                             <  1:5877418/101‑1 (MQ=255)
                                                      caaatCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAAtggt                                           >  2:5877860/1‑101 (MQ=255)
                                                       aaatCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAAtggtg                                          >  1:5877862/1‑101 (MQ=255)
                                                        aatCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAAtggtgg                                         >  1:5877865/1‑101 (MQ=255)
                                                          tCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTgggg                                       >  2:5877867/1‑101 (MQ=255)
                                                            tATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGgcg                                     >  1:5877871/1‑101 (MQ=255)
                                                            tATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGgcg                                     <  2:5877660/101‑1 (MQ=255)
                                                              tCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGcgcg                                   >  1:5877873/1‑101 (MQ=255)
                                                              tCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGcgcg                                   <  2:5877602/101‑1 (MQ=255)
                                                              tCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGcgcg                                   <  1:5877385/101‑1 (MQ=255)
                                                               cGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCgg                                  >  2:5877876/1‑101 (MQ=255)
                                                                gCTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCgg                                  >  1:5877880/1‑100 (MQ=255)
                                                                 cTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGgtg                                <  1:5877652/101‑1 (MQ=255)
                                                                 cTCCGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGgtg                                >  2:5877881/1‑101 (MQ=255)
                                                                   ccGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGtt                              >  1:5877886/1‑101 (MQ=255)
                                                                    cGAAATACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGttt                             <  1:5877480/101‑1 (MQ=255)
                                                                      aaaTACGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGt                           >  2:5877888/1‑101 (MQ=255)
                                                                        aTACGCCAACGGTGACCTGAGAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCg                         >  1:5877891/1‑101 (MQ=255)
                                                                          aCGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTc                          >  2:5877897/1‑98 (MQ=255)
                                                                          aCGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGAt                       <  2:5877420/101‑1 (MQ=255)
                                                                          aCGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGAt                       >  1:5877895/1‑101 (MQ=255)
                                                                           cGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGgcgt                               >  2:5877900/1‑92 (MQ=255)
                                                                           cGCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATa                      <  2:5877727/101‑1 (MQ=255)
                                                                            gCCAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTg                            >  1:5877903/1‑94 (MQ=255)
                                                                              cAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTg                   >  1:5877906/1‑101 (MQ=255)
                                                                              cAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTg                   >  2:5877905/1‑101 (MQ=255)
                                                                              cAACGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTg                   <  2:5877552/101‑1 (MQ=255)
                                                                               aaCGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAAtggtgg                                         >  1:5877911/1‑78 (MQ=255)
                                                                               aaCGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTgg                  <  2:5877496/101‑1 (MQ=255)
                                                                                aCGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGc                 <  2:5877481/101‑1 (MQ=255)
                                                                                 cGGTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCg                >  2:5877914/1‑101 (MQ=255)
                                                                                  ggTGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGa               >  1:5877915/1‑101 (MQ=255)
                                                                                    tGACCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAg             >  1:5877918/1‑101 (MQ=255)
                                                                                      aCCTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCg           >  2:5877923/1‑101 (MQ=255)
                                                                                       ccTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCgg          >  1:5877924/1‑101 (MQ=255)
                                                                                        cTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGt         <  2:5877637/101‑1 (MQ=255)
                                                                                        cTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGt         <  1:5877505/101‑1 (MQ=255)
                                                                                        cTGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGt         >  1:5877927/1‑101 (MQ=255)
                                                                                         tGAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGTa        >  2:5877929/1‑101 (MQ=255)
                                                                                          gAAAGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGTaa       >  1:5877932/1‑101 (MQ=255)
                                                                                           aaaGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTATAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGTAAg      <  2:5877351/101‑1 (MQ=255)
                                                                                           aaaGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGTAAg      <  1:5877645/101‑1 (MQ=255)
                                                                                            aaGGGGTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGTAAGc     <  1:5877498/101‑1 (MQ=255)
                                                                                               gggTCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGTAAGCGat  <  2:5877688/101‑1 (MQ=255)
                                                                                                  |                                                                                                 
GCCGGATCTGCGTTTCTTCGCCGGGGGCGACCGCAGTATTCGTGGCTACAAATACAAATCTATCGCTCCGAAATACGCCAACGGTGACCTGAAAGGGGCCTCGAAGTTGATAACCGGATCGCTGGAATACCAGTACAACGTGACCGGAAAATGGTGGGGCGCGGTGTTTGTCGATAGTGGCGAAGCGGTAAGCGAT  >  NC_000913/4443770‑4443965

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑