Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 827,694 A→G Y430H (TAT→CAT)  ybhF ← putative ABC exporter ATP binding subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913827,6940AG100.0% 1058.2 / NA 255Y430H (TAT→CAT) ybhFputative ABC exporter ATP binding subunit
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (118/137);  total (118/137)

Only 100 of 268 total aligned reads displayed.

TGGCAGTTCATCGGTGGCGTGGGAGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATACACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCG  >  NC_000913/827596‑827791
                                                                                                  |                                                                                                 
tGGCAGTTCATCGGTGGCGTGGGAGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATgca                                                                                                 <  1:1090684/101‑1 (MQ=255)
tGGCAGTTCATCGGTGGCGTGGGAGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATgca                                                                                                 >  1:1091204/1‑101 (MQ=255)
  gCAGTTCATCGGTGGCGTGGGAGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATgcaca                                                                                               <  1:1090529/101‑1 (MQ=255)
    aGTTCATCGGTGGCGTGGGAGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACAcc                                                                                             >  1:1091208/1‑101 (MQ=255)
     gTTCATCGGTGGCGTGGGAGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCa                                                                                            <  2:1091099/101‑1 (MQ=255)
      ttCATCGGTGGCGTGGGAGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCag                                                                                           <  2:1090711/101‑1 (MQ=255)
      ttCATCGGTGGCGTGGGAGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCag                                                                                           <  2:1090797/101‑1 (MQ=255)
      ttCATCGGTGGCGTGGGAGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCag                                                                                           >  1:1091212/1‑101 (MQ=255)
        cATCGGTGGCGTGGGAGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCagag                                                                                         >  2:1091213/1‑101 (MQ=255)
          tCGGTGGCGTGGGAGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGaa                                                                                       <  1:1090879/101‑1 (MQ=255)
          tCGGTGGCGTGGGAGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGaa                                                                                       <  2:1090731/101‑1 (MQ=255)
           cGGTGGCGTGGGAGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGaaa                                                                                      <  1:1090899/101‑1 (MQ=255)
           cGGTGGCGTGGGAGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGaaa                                                                                      >  2:1091218/1‑101 (MQ=255)
            ggTGGCGTGGGAGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGaaaa                                                                                     <  1:1090894/101‑1 (MQ=255)
            ggTGGCGTGGGAGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGaaaa                                                                                     >  2:1091220/1‑101 (MQ=255)
             gTGGCGTGGGAGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGaaaaa                                                                                    <  2:1090875/101‑1 (MQ=255)
              tGGCGTGGGAGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAg                                                                                   >  1:1091221/1‑101 (MQ=255)
                gCGTGGGAGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCg                                                                                 <  2:1090986/101‑1 (MQ=255)
                gCGTGGGAGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCg                                                                                 >  2:1091224/1‑101 (MQ=255)
                 cGTGGGAGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGt                                                                                <  1:1090767/101‑1 (MQ=255)
                 cGTGGGAGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGt                                                                                >  1:1091226/1‑101 (MQ=255)
                  gTGGGAGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTa                                                                               <  1:1090800/101‑1 (MQ=255)
                  gTGGGAGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTa                                                                               >  2:1091230/1‑101 (MQ=255)
                    gggAGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTaaa                                                                             >  1:1091232/1‑101 (MQ=255)
                     ggAGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAAt                                                                            <  2:1090887/101‑1 (MQ=255)
                      gAGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAAtt                                                                           <  2:1090870/101‑1 (MQ=255)
                      gAGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAAtt                                                                           >  2:1091236/1‑101 (MQ=255)
                      gAGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAAtt                                                                           >  1:1091237/1‑101 (MQ=255)
                       aGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTc                                                                          <  1:1090934/101‑1 (MQ=255)
                        ggCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCt                                                                         >  2:1091241/1‑101 (MQ=255)
                           gATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGtt                                                                      <  1:1090839/101‑1 (MQ=255)
                           gATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGtt                                                                      <  2:1090842/101‑1 (MQ=255)
                             tACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCg                                                                    >  1:1091245/1‑101 (MQ=255)
                              aCTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGa                                                                   <  1:1090792/101‑1 (MQ=255)
                              aCTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGa                                                                   <  1:1090925/101‑1 (MQ=255)
                              aCTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGa                                                                   >  2:1091247/1‑101 (MQ=255)
                                ttttCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCa                                                                                            >  1:1091251/1‑74 (MQ=255)
                                ttttCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGAcc                                                                 >  2:1091250/1‑101 (MQ=255)
                                     aGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAg                                                            >  2:1091256/1‑101 (MQ=255)
                                     aGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAg                                                            <  1:1090988/101‑1 (MQ=255)
                                      ggCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAgg                                                           <  1:1090867/101‑1 (MQ=255)
                                      ggCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAgg                                                           >  1:1091257/1‑101 (MQ=255)
                                         cGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTa                                                        >  1:1091261/1‑101 (MQ=255)
                                         cGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTa                                                        >  2:1091263/1‑101 (MQ=255)
                                          gAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTAc                                                       >  1:1091267/1‑101 (MQ=255)
                                          gAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTAc                                                       >  2:1091268/1‑101 (MQ=255)
                                           aaCGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTAcc                                                      <  1:1090961/101‑1 (MQ=255)
                                           aaCGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTAcc                                                      <  1:1090907/101‑1 (MQ=255)
                                           aaCGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTAcc                                                      <  1:1090993/101‑1 (MQ=255)
                                            aCGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCg                                                     >  1:1091272/1‑101 (MQ=255)
                                             cGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGt                                                    <  2:1090954/101‑1 (MQ=255)
                                              gCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTa                                                   >  1:1091275/1‑101 (MQ=255)
                                              gCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTa                                                   >  2:1091276/1‑101 (MQ=255)
                                                 tCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTagag                                                >  2:1091280/1‑101 (MQ=255)
                                                 tCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTagag                                                <  2:1090933/101‑1 (MQ=255)
                                                   gCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCg                                              <  2:1091039/101‑1 (MQ=255)
                                                    cTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGa                                             <  2:1091056/101‑1 (MQ=255)
                                                    cTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGa                                             >  1:1091283/1‑101 (MQ=255)
                                                    cTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGa                                             >  2:1091284/1‑101 (MQ=255)
                                                      cATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCa                                                             >  1:1091288/1‑83 (MQ=255)
                                                      cATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTag                                                  <  1:1090832/94‑1 (MQ=255)
                                                      cATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGaaa                                           <  2:1091000/101‑1 (MQ=255)
                                                       aTGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGaaaa                                          >  2:1091292/1‑101 (MQ=255)
                                                        tGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAAt                                         <  1:1091030/101‑1 (MQ=255)
                                                          cGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAAttt                                       <  2:1091015/101‑1 (MQ=255)
                                                           gggAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAAtttt                                      >  1:1091294/1‑101 (MQ=255)
                                                            ggAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCg                                                                >  2:1091297/1‑74 (MQ=255)
                                                                aTTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTgcgc                                 <  2:1090919/101‑1 (MQ=255)
                                                                    tttCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAAt                                                                            <  2:1090814/54‑1 (MQ=255)
                                                                     ttCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGc                                               <  1:1091053/82‑1 (MQ=255)
                                                                     ttCGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCatat                            >  1:1091299/1‑101 (MQ=255)
                                                                       cGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAg                          <  2:1091021/101‑1 (MQ=255)
                                                                       cGTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAg                          <  2:1090834/101‑1 (MQ=255)
                                                                        gTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGc                         <  2:1090926/101‑1 (MQ=255)
                                                                        gTTCTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGc                         >  2:1091302/1‑101 (MQ=255)
                                                                           cTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCga                      <  2:1090898/101‑1 (MQ=255)
                                                                           cTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCga                      <  2:1090771/101‑1 (MQ=255)
                                                                           cTGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCga                      <  1:1091005/101‑1 (MQ=255)
                                                                            tGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCgag                     >  2:1091306/1‑101 (MQ=255)
                                                                            tGCGCCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCgag                     <  1:1090969/101‑1 (MQ=255)
                                                                              cgcCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGAt                   <  2:1090970/101‑1 (MQ=255)
                                                                              cgcCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGAt                   <  1:1090948/101‑1 (MQ=255)
                                                                               gcCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATg                  <  2:1090945/101‑1 (MQ=255)
                                                                               gcCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATg                  <  1:1090869/101‑1 (MQ=255)
                                                                               gcCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATg                  <  1:1091059/101‑1 (MQ=255)
                                                                               gcCCGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATg                  >  1:1091309/1‑101 (MQ=255)
                                                                                cccGACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGc                 >  2:1091310/1‑101 (MQ=255)
                                                                                   gACCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTgg              >  1:1091313/1‑101 (MQ=255)
                                                                                    aCCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGgc             <  1:1090737/101‑1 (MQ=255)
                                                                                    aCCGCGTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGgc             <  2:1090908/101‑1 (MQ=255)
                                                                                      cgcgTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGgcgc           <  2:1091166/101‑1 (MQ=255)
                                                                                      cgcgTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGgcgc           >  2:1091315/1‑101 (MQ=255)
                                                                                         gTAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCt        >  2:1091319/1‑101 (MQ=255)
                                                                                          tAAGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCtt       >  1:1091322/1‑101 (MQ=255)
                                                                                           aaGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCttt      >  1:1091326/1‑101 (MQ=255)
                                                                                           aaGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCttt      >  2:1091323/1‑101 (MQ=255)
                                                                                            aGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGt                                                               <  2:1091033/43‑1 (MQ=255)
                                                                                            aGCCATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTa     <  1:1090974/101‑1 (MQ=255)
                                                                                              ccATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTAcc   <  1:1090851/101‑1 (MQ=255)
                                                                                               cATGCACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCttt      <  1:1091074/97‑1 (MQ=255)
                                                                                                  |                                                                                                 
TGGCAGTTCATCGGTGGCGTGGGAGGCGATACTTTTCAGGCCGAACGCCTCGCTCATGCGGGAGATTTTTTCGTTCTGCGCCCGACCGCGTAAGCCATACACACCAGAGAAAAAGCGTAAATTCTGTTCGACCGTCAGGTTACCGTAGAGCGAAAATTTTTGCGCCATATAGCCGAGATGCTGGCGCGCTTTACCG  >  NC_000913/827596‑827791

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑