BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,175,049	T→C	L39L (TTA→TTG)	ycfT ←	inner membrane protein YcfT

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,175,049	0	T	C	100.0%	685.4 / NA	165	L39L (TTA→TTG)	ycfT	inner membrane protein YcfT
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (114/51); total (114/51)

Only 100 of 165 total aligned reads displayed.

CGGCGAATCAAATAGCCGGATATAAAGAAAAAAACCGGCATACGAAAGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGATAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATCACCACCAGACAAATACATAACCCTTTGATCTGGTTAATCC  >  NC_000913/1174951‑1175146

cggcgAATCAAATAGCCGGATATAAAGAAAAAAACCGGCATACGAAAGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACaa                                                                                                 >  2:1534891/1‑101 (MQ=255)

cggcgAATCAAATAGCCGGATATAAAGAAAAAAACCGGCATACGAAAGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACaa                                                                                                 >  1:1534890/1‑101 (MQ=255)

 ggcgAATCAAATAGCCGGATATAAAGAAAAAAACCGGCATACGAAAGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAAc                                                                                                <  2:1534767/101‑1 (MQ=255)

   cgAATCAAATAGCCGGATATAAAGAAAAAAACCGGCATACGAAAGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACgg                                                                                              >  1:1534894/1‑101 (MQ=255)

    gAATCAAATAGCCGGATATAAAGAAAAAAACCGGCATACGAAAGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGa                                                                                             >  1:1534895/1‑101 (MQ=255)

     aaTCAAATAGCCGGATATAAAGAAAAAAACCGGCATACGAAAGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGAt                                                                                            >  1:1534897/1‑101 (MQ=255)

     aaTCAAATAGCCGGATATAAAGAAAAAAACCGGCATACGAAAGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGAt                                                                                            <  2:1534790/101‑1 (MQ=255)

      aTCAAATAGCCGGATATAAAGAAAAAAACCGGCATACGAAAGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATg                                                                                           <  2:1534721/101‑1 (MQ=255)

      aTCAAATAGCCGGATATAAAGAAAAAAACCGGCATACGAAAGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATg                                                                                           >  1:1534899/1‑101 (MQ=255)

         aaaTATCCGGATATAAAGAAAAAAACCGGCATACGAAAGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTg                                                                                        <  2:1534803/101‑1 (MQ=255)

           aTAGCCGGATATAAAGAAAAAAACCGGCATACGAAAGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGaa                                                                                      >  1:1534900/1‑101 (MQ=255)

            tAGCCGGATATAAAGAAAAAAACCGGCATACGAAAGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGaaa                                                                                     <  2:1534542/101‑1 (MQ=255)

             aGCCGGATATAAAGAAAAAAACCGGCATACGAAAGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGaaaa                                                                                    >  1:1534902/1‑101 (MQ=255)

              gCCGGATATAAAGAAAAAAACCGGCATACGAAAGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAg                                                                                   >  1:1534904/1‑101 (MQ=255)

              gCCGGATATAAAGAAAAAAACCGGCATACGAAAGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAg                                                                                   >  1:1534905/1‑101 (MQ=255)

               ccGGATATAAAGAAAAAAACCGGCATACGAAAGGGGGCAAGGTAAAAATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGt                                                                                  <  2:1534758/101‑1 (MQ=255)

                cGGATATAAAGAAAAAAACCGGCATACGAAAGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTg                                                                                 >  1:1534907/1‑101 (MQ=255)

                cGGATATAAAGAAAAAAACCGGCATACGAAAGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTg                                                                                 <  2:1534744/101‑1 (MQ=255)

                 ggATATAAAGAAAAAAACCGGCATACGAAAGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTgg                                                                                <  1:1534705/101‑1 (MQ=255)

                 ggATATAAAGAAAAAAACCGGCATACGAAAGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTgg                                                                                >  1:1534909/1‑101 (MQ=255)

                  gATATAAAGAAAAAAACCGGCATACGAAAGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGt                                                                               >  1:1534910/1‑101 (MQ=255)

                     ataAAGAAAAAAACCGGCATACGAAAGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAg                                                                            >  2:1534912/1‑101 (MQ=255)

                      taAAGAAAAAAACCGGCATACGAAAGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGa                                                                           >  1:1534913/1‑101 (MQ=255)

                       aaaGAAAAAAACCGGCATACGAAAGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGAt                                                                          <  1:1534645/101‑1 (MQ=255)

                        aaGAAAAAAACCGGCATACGAAAGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATg                                                                         >  1:1534916/1‑101 (MQ=255)

                        aaGAAAAAAACCGGCATACGAAAGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATg                                                                         >  1:1534915/1‑101 (MQ=255)

                          gAAAAAAACCGGCATACGAAAGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCg                                                                       <  2:1534667/101‑1 (MQ=255)

                          gAAAAAAACCGGCATACGAAAGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCg                                                                       <  2:1534693/101‑1 (MQ=255)

                          gAAAAAAACCGGCATACGAAAGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCg                                                                       >  1:1534918/1‑101 (MQ=255)

                            aaaaaaCCGGCATACGAAAGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGa                                                                     >  1:1534920/1‑101 (MQ=255)

                             aaaaaCCGGCATACGAAAGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGAt                                                                    <  2:1534551/101‑1 (MQ=255)

                              aaaaCCGGCATACGAAAGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATa                                                                   >  1:1534921/1‑101 (MQ=255)

                                 aCCTGCATACGAAAGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATaaaa                                                                <  2:1534750/101‑1 (MQ=255)

                                     gCATACGAAAGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTa                                                            >  1:1534924/1‑101 (MQ=255)

                                      cATACGAAAGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTaa                                                           >  1:1534926/1‑101 (MQ=255)

                                      cATACGAAAGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTaa                                                           >  2:1534927/1‑101 (MQ=255)

                                       aTACGAAAGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAAt                                                          >  1:1534930/1‑101 (MQ=255)

                                         aCGAAAGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGa                                                        >  1:1534932/1‑101 (MQ=255)

                                          cGAAAGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGAc                                                       >  1:1534933/1‑101 (MQ=255)

                                          cGAAAGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGAc                                                       >  2:1534934/1‑101 (MQ=255)

                                           gAAAGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGAcc                                                      >  1:1534937/1‑101 (MQ=255)

                                            aaaGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCg                                                     <  2:1534783/101‑1 (MQ=255)

                                            aaaGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCg                                                     >  1:1534939/1‑101 (MQ=255)

                                             aaGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTg                                                                                 >  2:1534941/1‑72 (MQ=255)

                                             aaGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGa                                                    >  1:1534940/1‑101 (MQ=255)

                                              aGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAg                                                   >  2:1534942/1‑101 (MQ=255)

                                               gggggCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGt                                                  <  2:1534926/101‑1 (MQ=255)

                                                   gCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATa                                              <  2:1534823/101‑1 (MQ=255)

                                                    cAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATaa                                             <  2:1534739/101‑1 (MQ=255)

                                                     aaGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATaaa                                            <  2:1534787/101‑1 (MQ=255)

                                                     aaGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATaaa                                            >  1:1534946/1‑101 (MQ=255)

                                                     aaGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATaaa                                            >  2:1534945/1‑101 (MQ=255)

                                                      aGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAAt                                           <  2:1534741/101‑1 (MQ=255)

                                                      aGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAAt                                           <  2:1534565/101‑1 (MQ=255)

                                                         tAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATcac                                        >  1:1534948/1‑101 (MQ=255)

                                                         tAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATcac                                        >  1:1534949/1‑101 (MQ=255)

                                                          aaaGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATcacc                                       >  2:1534950/1‑101 (MQ=255)

                                                           aaGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATcacca                                      >  2:1534952/1‑101 (MQ=255)

                                                           aaGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATcacca                                      <  2:1534649/101‑1 (MQ=255)

                                                            aGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATcaccac                                     >  1:1534954/1‑101 (MQ=255)

                                                             gATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATCaccacc                                    >  2:1534956/1‑101 (MQ=255)

                                                             gATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATCaccacc                                    >  2:1534957/1‑101 (MQ=255)

                                                                  aaaTAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATCACCACCAGACa                               >  1:1534961/1‑101 (MQ=255)

                                                                  aaaTAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATCACCACCAGACa                               >  2:1534960/1‑101 (MQ=255)

                                                                  aaaTAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATCACCACCAGACa                               >  1:1534963/1‑101 (MQ=255)

                                                                   aaTAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATCACCACCAGACaa                              >  2:1534964/1‑101 (MQ=255)

                                                                    aTAGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATCACCACCAGACaaa                             >  2:1534966/1‑101 (MQ=255)

                                                                      ataTCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATCACCACCAGACAAATa                           >  1:1534968/3‑101 (MQ=255)

                                                                      aGATCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATCACCACCAGACAAATa                           >  2:1534969/1‑101 (MQ=255)

                                                                        aTCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATCACCACCAGACAAATACa                         >  1:1534971/1‑101 (MQ=255)

                                                                         tCCAGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATCACCACCAGACAAATACAt                        >  1:1534972/1‑101 (MQ=255)

                                                                            aGCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATCACCACCAGACAAATACATAAc                     >  2:1534974/1‑101 (MQ=255)

                                                                             gCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGTTAAATCACCACCAGACAAATACATAAcc                    >  2:1534978/1‑101 (MQ=255)

                                                                             gCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATCACCACCAGACAAATACATAAcc                    >  2:1534976/1‑101 (MQ=255)

                                                                             gCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATCACCACCAGACAAATACATAAcc                    <  2:1534722/101‑1 (MQ=255)

                                                                             gCATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATCACCACCAGACAAATACATAAcc                    <  1:1534760/101‑1 (MQ=255)

                                                                              caattGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATCACCACCAGACAAATACATAAccc                   >  1:1534980/4‑101 (MQ=255)

                                                                              cATTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATCACCACCAGACAAATACATAAccc                   >  2:1534982/1‑101 (MQ=255)

                                                                               aTTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATCACCACCAGACAAATACATACCCCt                  <  2:1534701/101‑1 (MQ=255)

                                                                               aTTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATCACCACCAGACAAATACATAACCCt                  <  2:1534791/101‑1 (MQ=255)

                                                                               aTTTGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATCACCACCAGACAAATACATAACCCt                  >  2:1534983/1‑101 (MQ=255)

                                                                                tttGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATCACCACCAGACAAATACATAACCCtt                 >  1:1534984/1‑101 (MQ=255)

                                                                                tttGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATCACCACCAGACAAATACATAACCCtt                 <  2:1534718/101‑1 (MQ=255)

                                                                                 ttGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATCACCACCAGACAAATACATAACCCttt                <  2:1534704/101‑1 (MQ=255)

                                                                                 ttGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATCACCACCAGACAAATACATAACCCttt                >  1:1534986/1‑101 (MQ=255)

                                                                                  tGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATCACCACCAGACAAATACATAACCCTTTg               <  2:1534779/101‑1 (MQ=255)

                                                                                  tGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATCACCACCAGACAAATACATAACCCTTTg               <  2:1534732/101‑1 (MQ=255)

                                                                                  tGCTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATCACCACCAGACAAATACATAACCCTTTg               >  2:1534988/1‑101 (MQ=255)

                                                                                    cTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGa                                                                           >  1:1534989/1‑39 (MQ=255)

                                                                                    cTCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATCACCACCAGACAAATACATAACCCTTTGAt             <  2:1534770/101‑1 (MQ=255)

                                                                                     tCAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATCACCACCAGACAAATACATAACCCTTTGATc            >  1:1534990/1‑101 (MQ=255)

                                                                                      cAGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATCACCACCAGACAAATACATAACCCTTTGATCt           >  1:1534993/1‑101 (MQ=255)

                                                                                       aGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATCACCACCAGACAAATACATAACCCTTTGATCTg          <  1:1534821/101‑1 (MQ=255)

                                                                                       aGGACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATCACCACCAGACAAATACATAACCCTTTGATCTg          >  2:1534994/1‑101 (MQ=255)

                                                                                        ggACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATCACCACCAGACAAATACATAACCCTTTGATCTgg         >  2:1534996/1‑101 (MQ=255)

                                                                                         gACTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATCACCACCAGACAAATACATAACCCTTTGATCTGGt        >  1:1534997/1‑101 (MQ=255)

                                                                                           cTTCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATCACCACCAGACAAATACATAACCCTTTGATCTGGTTa      >  1:1534999/1‑101 (MQ=255)

                                                                                             tCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATCACCACCAGACAAATACATAACCCTTTGATCTGGTTAAt    <  2:1534782/101‑1 (MQ=255)

                                                                                             tCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATCACCACCAGACAAATACATAACCCTTTGATCTGGTTAAt    >  1:1535001/1‑101 (MQ=255)

                                                                                             tCCGACAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATCACCACCAGACAAATACATAACCCTTTGATCTGGTTAAt    >  2:1535002/1‑101 (MQ=255)

CGGCGAATCAAATAGCCGGATATAAAGAAAAAAACCGGCATACGAAAGGGGGCAAGGTAAAGATTGAAATAGATCCAGCATTTGCTCAGGACTTCCGATAACGGATGCTGAAAAGTGGTCAGATGCGGATAAAAGGTAATGACCGAGTGATAAATCACCACCAGACAAATACATAACCCTTTGATCTGGTTAATCC  >  NC_000913/1174951‑1175146

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`