| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 657,402 | G→A | Q37Q (CAG→CAA) | cspE → | transcription antiterminator and regulator of RNA stability |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 657,402 | 0 | G | A | 79.1% | 785.8 / 197.1 | 306 | Q37Q (CAG→CAA) | cspE | transcription antiterminator and regulator of RNA stability |
| Reads supporting (aligned to +/- strand): ref base G (32/32); new base A (106/136); total (138/168) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.99e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.73e-01 | |||||||||||
Only 100 of 307 total aligned reads displayed.
TTAAAGGTAACGTTAAGTGGTTTAATGAGTCCAAAGGATTCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGTAA > NC_000913/657302‑657501 | aaaGGTAACGTTAAGTGGTTTAATGAGTCCAAAGGATTCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAAc > 2:1084853/1‑101 (MQ=255) aaaGGTAACGTTAAGTGGTTTAATGAGTCCAAAGGATTCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAAc < 1:1084451/101‑1 (MQ=255) aaaGGTAACGTTAAGTGGTTTAATGAGTCCAAAGGATTCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAAc < 2:1084284/101‑1 (MQ=255) aaGGTAACGTTAAGTGGTTTAATGAGTCCAAAGGATTCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACt > 1:1084856/1‑101 (MQ=255) tAACGTTAAGTGGTTTAATGAGTCCAAAGGATTCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAATg > 2:1084859/1‑101 (MQ=255) tAACGTTAAGTGGTTTAATGAGTCCAAAGGATTCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATg < 1:1084293/101‑1 (MQ=255) aaCGTTAAGTGGTTTAATGAGTCCAAAGGATTCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATgg > 2:1084864/1‑101 (MQ=255) cGTTAAGTGGTTTAATGAGTCCAAAGGATTCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAATg < 1:1084538/98‑1 (MQ=255) cGTTAAGTGGTTTAATGAGTCCAAAGGATTCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGtt < 1:1084448/101‑1 (MQ=255) gTTAAGTGGTTTAATGAGTCCAAAGGATTCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAATGGttt < 1:1084394/101‑1 (MQ=255) gTTAAGTGGTTTAATGAGTCCAAAGGATTCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGttt < 1:1084416/101‑1 (MQ=255) gTTAAGTGGTTTAATGAGTCCAAAGGATTCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGttt > 2:1084867/1‑101 (MQ=255) ttAAGTGGTTTAATGAGTCCAAAGGATTCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGtttt < 1:1084513/101‑1 (MQ=255) tAAGTGGTTTAATGAGTCCAAAGGATTCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTa > 2:1084870/1‑101 (MQ=255) gTTTAATGAGTCCAAAGGATTCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAActc < 1:1084482/101‑1 (MQ=255) gTTTAATGAGTCCAAAGGATTCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAActc < 1:1084348/101‑1 (MQ=255) gTTTAATGAGTCCAAAGGATTCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAActc < 2:1084422/101‑1 (MQ=255) tttAATGAGTCCAAAGGATTCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAATGGTTTTAAAActct > 2:1084878/1‑101 (MQ=255) tttAATGAGTCCAAAGGATTCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAActct < 1:1083890/101‑1 (MQ=255) tttAATGAGTCCAAAGGATTCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAActct > 1:1084876/1‑101 (MQ=255) tttAATGAGTCCAAAGGATTCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAActct < 2:1084701/101‑1 (MQ=255) ttAATGAGTCCAAAGGATTCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCtt < 1:1084428/101‑1 (MQ=255) aaTGAGTCCAAAGGATTCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGc > 2:1084881/1‑101 (MQ=255) aaTGAGTCCAAAGGATTCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGc < 1:1084249/101‑1 (MQ=255) tGAGTCCAAAGGATTCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTg < 2:1084329/101‑1 (MQ=255) tGAGTCCAAAGGATTCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTg > 1:1084884/1‑101 (MQ=255) gAGTCCAAAGGATTCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGa < 1:1084403/101‑1 (MQ=255) gAGTCCAAAGGATTCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGa < 1:1084198/101‑1 (MQ=255) gTCCAAAGGATTCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAg < 1:1084500/101‑1 (MQ=255) gTCCAAAGGATTCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAg > 1:1084888/1‑101 (MQ=255) cAAAGGATTCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTg > 2:1084896/1‑92 (MQ=255) cAAAGGATTCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTc < 1:1084565/101‑1 (MQ=255) cAAAGGATTCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTc > 1:1084895/1‑101 (MQ=255) cAAAGGATTCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTc > 2:1084892/1‑101 (MQ=255) aaaGGATTCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCa < 2:1084455/101‑1 (MQ=255) aaaGGATTCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCa < 1:1084386/101‑1 (MQ=255) aGGATTCGGTTTCATTTCTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCtt < 1:1084436/88‑1 (MQ=255) aGGATTCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAgc < 1:1084367/101‑1 (MQ=255) aGGATTCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAgc < 1:1084868/101‑1 (MQ=255) gATTCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAgcgc > 1:1084901/1‑101 (MQ=255) aTTCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGcgcg > 1:1084905/1‑101 (MQ=255) aTTCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGcgcg > 2:1084904/1‑101 (MQ=255) tCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTa < 1:1084705/101‑1 (MQ=255) ggTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTaga < 1:1084407/101‑1 (MQ=255) gTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTagag < 1:1084624/101‑1 (MQ=255) gTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTagag < 1:1084465/101‑1 (MQ=255) tttCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGt > 1:1084911/1‑101 (MQ=255) tttCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGt > 2:1084909/1‑101 (MQ=255) ttCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGtt < 1:1084543/101‑1 (MQ=255) tCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTc < 1:1084279/101‑1 (MQ=255) tCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTc < 2:1084526/101‑1 (MQ=255) cATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCg > 2:1084915/1‑101 (MQ=255) aTTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGa < 1:1084304/101‑1 (MQ=255) ttACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGaa > 1:1084917/1‑101 (MQ=255) ttACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGaa < 2:1084668/101‑1 (MQ=255) aCTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAAt > 2:1084923/1‑101 (MQ=255) cTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATc > 1:1084924/1‑101 (MQ=255) tCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCa < 1:1084590/101‑1 (MQ=255) tCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCa < 2:1084444/101‑1 (MQ=255) ccGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCAc > 2:1084928/1‑101 (MQ=255) aaGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAAc > 1:1084932/1‑101 (MQ=255) aGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACg > 2:1084934/1‑101 (MQ=255) aCGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAATggct > 1:1084937/1‑49 (MQ=255) aCGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGt < 1:1084462/101‑1 (MQ=255) ggCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTg < 1:1084441/100‑1 (MQ=255) ggCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGc > 2:1084940/1‑101 (MQ=255) ggCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGc > 1:1084943/1‑101 (MQ=255) gcagcaAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGcc > 2:1084945/1‑101 (MQ=255) agcaAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCaa > 2:1084948/1‑101 (MQ=255) caAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAg > 1:1084953/1‑101 (MQ=255) caAAGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAg < 2:1084552/101‑1 (MQ=255) aaGACGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAGGc > 2:1084956/1‑101 (MQ=255) gACGTGTTCGTACACTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAg > 2:1084959/1‑97 (MQ=255) aCGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAGGCCCt < 2:1084160/101‑1 (MQ=255) aCGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAGGCCCt > 1:1084960/1‑101 (MQ=255) cGTGTTCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAGGCCCtt < 2:1084515/101‑1 (MQ=255) gtgtTCGTACACTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAGGCCCTTc < 1:1084663/101‑1 (MQ=255) tgtTCGTACACTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAGGCCCTTct < 2:1084402/101‑1 (MQ=255) tCGTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAGGCCCTTctgct > 2:1084965/1‑101 (MQ=255) gTACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAGGCCCTTCtgctgc > 1:1084968/1‑101 (MQ=255) tACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAGGCCCTTCTGCTGCa < 1:1084652/101‑1 (MQ=255) tACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAGGCCCTTCTGCTGCa < 1:1084631/101‑1 (MQ=255) tACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAGGCCCTTCTGCTGCa < 2:1084571/101‑1 (MQ=255) tACACTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAGGCCCTTCTGCTGCa > 2:1084971/1‑101 (MQ=255) cacTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAGGCCCTTCTGCTGCaaa > 1:1084972/1‑101 (MQ=255) cTTCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAGGCCCTTCTGCTGCAAACg < 2:1084483/101‑1 (MQ=255) ttCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGt < 1:1084424/101‑1 (MQ=255) ttCTCTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGt > 2:1084976/1‑101 (MQ=255) tctcTGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTa < 2:1084595/101‑1 (MQ=255) tctGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAAt < 1:1084520/101‑1 (MQ=255) tGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAg > 2:1084981/1‑38 (MQ=255) tGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCg < 1:1084690/101‑1 (MQ=255) tGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCg > 1:1084978/1‑101 (MQ=255) tGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCg < 2:1084592/101‑1 (MQ=255) tGCAATCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCg < 2:1084505/101‑1 (MQ=255) cAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGct > 2:1084984/1‑101 (MQ=255) aTCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGctct > 2:1084987/1‑101 (MQ=255) aTCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGctat < 1:1084478/101‑3 (MQ=255) tCCAAACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTg < 1:1084474/101‑1 (MQ=255) cAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGTa < 1:1084836/101‑1 (MQ=255) | TTAAAGGTAACGTTAAGTGGTTTAATGAGTCCAAAGGATTCGGTTTCATTACTCCGGAAGACGGCAGCAAAGACGTGTTCGTACACTTCTCTGCAATCCAGACTAATGGTTTTAAAACTCTTGCTGAAGGTCAGCGCGTAGAGTTCGAAATCACTAACGGTGCCAAAGGCCCTTCTGCTGCAAACGTAATCGCTCTGTAA > NC_000913/657302‑657501 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |