Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 879,250 G→A R170H (CGC→CAC)  yliI → aldose sugar dehydrogenase YliI

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913879,2500GA98.9% 1061.2 / NA 268R170H (CGC→CAC) yliIaldose sugar dehydrogenase YliI
Reads supporting (aligned to +/- strand):  ref base G (0/1);  major base A (147/117);  minor base C (0/3);  total (147/121)
Fisher's exact test for biased strand distribution p-value = 8.95e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 268 total aligned reads displayed.

CCAGATGCCAAAACTGTCTACCGGCAACCATTTTGGCGGGCGGCTGGTATTCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCGCCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGAAATCCCGGATGATAATCCTTTTATAAAGGAATCC  >  NC_000913/879152‑879347
                                                                                                  |                                                                                                 
ccAGATGCCAAAACTGTCTACCGGCAACCATTTTGGCGGGCGGCTGGTATTCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCAcc                                                                                                 <  1:1443236/101‑1 (MQ=255)
ccAGATGCCAAAACTGTCTACCGGCAACCATTTTGGCGGGCGGCTGGTATTCGACGGGAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCAcc                                                                                                 >  2:1443530/1‑101 (MQ=255)
 cAGATGCCAAAACTGTCTACCGGCAACCATTTTGGCGGGCGGCTGGTATTCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCAccc                                                                                                >  1:1443534/1‑101 (MQ=255)
  aGATGCCAAAACTGTCTACCGGCAACCATTTTGGCGGGCGGCTGGTATTCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCg                                                                                               <  1:1443243/101‑1 (MQ=255)
  aGATGCCAAAACTGTCTACCGGCAACCATTTTGGCGGGCGGCTGGTATTCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAAAAATCAGCACCCg                                                                                               >  2:1443535/1‑101 (MQ=255)
     tGCCAAAACTGTCTACCGGCAACCATTTTGGCGGGCGGCTGGTATTCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACg                                                                                            <  1:1443349/101‑1 (MQ=255)
      gCCAAAACTGTCTACCGGCAACCATTTTGGCGGGCGGCTGGTATTCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACgg                                                                                           >  1:1443540/1‑101 (MQ=255)
         aaaaCTGTCTACCGGCAACCATTTTGGCGGGCGGCTGGTATTCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGgcgc                                                                                        >  2:1443544/1‑101 (MQ=255)
          aaaCTGTCTACCGGCAACCATTTTGGCGGGCGGCTGGTATTCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCa                                                                                       <  1:1442958/101‑1 (MQ=255)
            aCTGTCTACCGGCAACCATTTTGGCGGGCGGCTGGTATTCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCa                                                                                       >  1:1443548/1‑99 (MQ=255)
            aCTGTCTACCGGCAACCATTTTGGCGGGCGGCTGGTATTCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAgg                                                                                     <  2:1443136/101‑1 (MQ=255)
              tGTCTACCGGCAACCATTTTGGCGGGCGGCTGGTATTCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGAt                                                                                   <  2:1443268/101‑1 (MQ=255)
               gTCTACCGGCAACCATTTTGGCGGGCGGCTGGTATTCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATc                                                                                  <  2:1443072/101‑1 (MQ=255)
                 cTACCGGCAACCATTTTGGCGGGCGGCTGGTATTCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACgg                                                                                           >  2:1443552/1‑90 (MQ=255)
                 cTACCGGCAACCATTTTGGCGGGCGGCTGGTATTCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTg                                                                                >  1:1443551/1‑101 (MQ=255)
                    ccGGCAACCATTTTGGCGGGCGGCTGGTATTCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGAt                                                                             <  1:1443174/101‑1 (MQ=255)
                     cGGCAACCATTTTGGCGGGCGGCTGGTATTCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAg                                                                                      <  2:1443086/91‑1 (MQ=255)
                      ggCAACCATTTTGGCGGGCGGCTGGTATTCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATaa                                                                           <  1:1443063/101‑1 (MQ=255)
                         aaCCATTTTGGCGGGCGGCTGGTATTCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAAtt                                                                        <  2:1443120/101‑1 (MQ=255)
                         aaCCATTTTGGCGGGCGGCTGGTATTCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAAtt                                                                        >  1:1443558/1‑101 (MQ=255)
                          aCCATTTTGGCGGGCGGGTGGTATTCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTa                                                                       >  1:1443561/1‑101 (MQ=255)
                            cATTTTGGCGGGCGGCTGGTATTCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACa                                                                     <  1:1443092/101‑1 (MQ=255)
                             aTTTTGGCGGGCGGCTGGTATTCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAg                                                                    <  1:1443411/101‑1 (MQ=255)
                               tttGGCGGGCGGCTGGTATTCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAggg                                                                  >  1:1443564/1‑101 (MQ=255)
                                 tGGCGGGCGGCTGGTATTCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCa                                                                <  2:1443196/101‑1 (MQ=255)
                                  ggcgggcgGCTGGTATTCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAgg                                                                   <  2:1442962/97‑1 (MQ=255)
                                    cgggcggCTGGTATTCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAAc                                                             >  2:1443567/1‑101 (MQ=255)
                                    cgggcggCTGGTATTCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAAc                                                             <  1:1443250/101‑1 (MQ=255)
                                     gggcggCTGGTATTCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACt                                                            >  2:1443569/1‑101 (MQ=255)
                                      ggcggcTGGTATTCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTg                                                           >  1:1443571/1‑101 (MQ=255)
                                       gcggcTGGTATTCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGgcgc                                                                                        >  2:1443574/1‑71 (MQ=255)
                                       gcggcTGGTATTCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTgg                                                          <  2:1443199/101‑1 (MQ=255)
                                        cggcTGGTATTCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGt                                                         <  1:1443209/101‑1 (MQ=255)
                                         ggcTGGTATTCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTg                                                        <  2:1443181/101‑1 (MQ=255)
                                         ggcTGGTATTCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTg                                                        <  1:1443162/101‑1 (MQ=255)
                                          gcTGGTATTCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGc                                                       >  2:1443578/1‑101 (MQ=255)
                                            tGGTATTCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGt                                                     >  1:1443585/1‑101 (MQ=255)
                                            tGGTATTCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGt                                                     >  2:1443584/1‑101 (MQ=255)
                                            tGGTATTCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGt                                                     >  2:1443581/1‑101 (MQ=255)
                                              gTATTCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCt                                                   <  2:1443279/101‑1 (MQ=255)
                                               tATTCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTg                                                  <  2:1443367/101‑1 (MQ=255)
                                               tATTCGACGGTAAAGGCTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCAccc                                                                                                >  2:1443589/1‑55 (MQ=255)
                                                aTTCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTga                                                 >  1:1443590/1‑101 (MQ=255)
                                                 ttCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTgac                                                >  2:1443592/1‑101 (MQ=255)
                                                  tCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTgacc                                               <  1:1442979/101‑1 (MQ=255)
                                                    gACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTgaccga                                             >  2:1443600/1‑101 (MQ=255)
                                                    gACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTgaccga                                             >  2:1443597/1‑101 (MQ=255)
                                                     aCGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTgaccgac                                            >  2:1443602/1‑101 (MQ=255)
                                                     aCGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTgaccgac                                            >  1:1443603/1‑101 (MQ=255)
                                                        gTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAg                                         >  2:1443608/1‑101 (MQ=255)
                                                        gTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAg                                         <  2:1443026/101‑1 (MQ=255)
                                                        gTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAg                                         >  1:1443609/1‑101 (MQ=255)
                                                        gTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAg                                         <  1:1443188/101‑1 (MQ=255)
                                                         tAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAgg                                        <  2:1443145/101‑1 (MQ=255)
                                                          aaaGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAggg                                       >  1:1443613/1‑101 (MQ=255)
                                                             ggTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGa                                    >  1:1443616/1‑101 (MQ=255)
                                                             ggTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGa                                    <  1:1443214/101‑1 (MQ=255)
                                                              gTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGaa                                   <  1:1443300/101‑1 (MQ=255)
                                                               ttATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGaaa                                  >  2:1443619/1‑101 (MQ=255)
                                                                tATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAg                                                                                      <  2:1443111/48‑1 (MQ=255)
                                                                tATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGAAAt                                 >  2:1443621/1‑101 (MQ=255)
                                                                tATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGAAAt                                 >  1:1443622/1‑101 (MQ=255)
                                                                tATCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGAAAt                                 <  2:1443425/101‑1 (MQ=255)
                                                                 aTCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGAAATc                                >  1:1443624/1‑101 (MQ=255)
                                                                  tCTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGAAATcc                               >  1:1443627/1‑101 (MQ=255)
                                                                   cTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGAAATccc                              <  1:1443287/101‑1 (MQ=255)
                                                                   cTTTTTATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGAAATccc                              <  2:1443221/101‑1 (MQ=255)
                                                                    tttttATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGAAATCCCg                             >  2:1443630/1‑101 (MQ=255)
                                                                     ttttATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGAAATCCCgg                            <  1:1443135/101‑1 (MQ=255)
                                                                      tttATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGAAATCCCGga                           >  1:1443634/1‑101 (MQ=255)
                                                                       ttATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGAAATCCCGgat                          >  2:1443636/1‑101 (MQ=255)
                                                                       ttATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGAAATCCCGgat                          <  2:1443386/101‑1 (MQ=255)
                                                                       ttATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGAAATCCCGgat                          <  2:1443320/101‑1 (MQ=255)
                                                                       ttATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGAAATCCCGgat                          >  1:1443639/1‑101 (MQ=255)
                                                                       ttATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGAAATCCCGgat                          <  2:1443228/101‑1 (MQ=255)
                                                                        tATTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGAAATCCCGgatg                         >  1:1443642/1‑101 (MQ=255)
                                                                         aTTGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGAAATCCCGgatga                        >  2:1443643/1‑101 (MQ=255)
                                                                           tGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGAAATCCCGGATGATa                      >  2:1443649/1‑101 (MQ=255)
                                                                           tGCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGAAATCCCGGATGATa                      >  1:1443648/1‑101 (MQ=255)
                                                                            gCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGAAATCCCGGATGATaa                     >  2:1443653/1‑101 (MQ=255)
                                                                            gCTCTGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGAAATCCCGGATGATaa                     >  1:1443655/1‑101 (MQ=255)
                                                                             ctctGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGAAATCCCGGATGATAAt                    <  1:1443331/101‑1 (MQ=255)
                                                                             ctctGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGAAATCCCGGATGATAAt                    >  2:1443658/1‑101 (MQ=255)
                                                                             ctctGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGAAATCCCGGATGATAAt                    <  1:1443112/101‑1 (MQ=255)
                                                                              tctGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGAAATCCCGGATGATAATc                   >  2:1443661/1‑101 (MQ=255)
                                                                               ctGGGCGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGAAATCCCGGATGATAATcc                  >  1:1443663/1‑101 (MQ=255)
                                                                                    cGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGAAATCCCGGATGATAATCCTTTta             <  1:1443280/101‑1 (MQ=255)
                                                                                    cGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGAAATCCCGGATGATAATCCTTTta             >  1:1443667/1‑101 (MQ=255)
                                                                                    cGAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGAAATCCCGGATGATAATCCTTTta             >  2:1443668/1‑101 (MQ=255)
                                                                                     gAAAACAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGAAATCCCGGATGATAATCCTTTtat            >  2:1443671/1‑101 (MQ=255)
                                                                                      aaaaCAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGAAATCCCGGATGATAATCCTTTtata           <  1:1443325/101‑1 (MQ=255)
                                                                                       aaaCAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGAAATCCCGGATGATAATCCTTTTATaa          <  2:1442991/101‑1 (MQ=255)
                                                                                       aaaCAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGAAATCCCGGATGATAATCCTTTTATaa          <  1:1443380/101‑1 (MQ=255)
                                                                                       aaaCAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGAAATCCCGGATGATAATCCTTTTATaa          >  1:1175745/1‑101 (MQ=255)
                                                                                        aaCAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGAAATCCCGGATGATAATCCTTTTATaaa         >  1:1443673/1‑101 (MQ=255)
                                                                                          cAATCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGAAATCCCGGATGATAATCCTTTTATAAAgg       >  2:1443675/1‑101 (MQ=255)
                                                                                           aaTCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGAAATCCCGGATGATAATCCTTTTATaa          >  2:1443678/1‑97 (MQ=255)
                                                                                            aTCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGAAATCCCGGATGATAATCCTTTTATAAAGGaa     <  2:1443210/101‑1 (MQ=255)
                                                                                            aTCAGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGAAATCCCGGATGATAATCCTTTTATAAAGGaa     <  2:1443176/101‑1 (MQ=255)
                                                                                               aGCACCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGAAATCCCGGATGATAATCCTTTTATAAAGGAATcc  <  2:1443253/101‑1 (MQ=255)
                                                                                                  |                                                                                                 
CCAGATGCCAAAACTGTCTACCGGCAACCATTTTGGCGGGCGGCTGGTATTCGACGGTAAAGGTTATCTTTTTATTGCTCTGGGCGAAAACAATCAGCGCCCGACGGCGCAGGATCTGGATAAATTACAGGGCAAACTGGTGCGTCTGACCGACCAGGGCGAAATCCCGGATGATAATCCTTTTATAAAGGAATCC  >  NC_000913/879152‑879347

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑