BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,397,384	A→G	V20A (GTG→GCG)	nuoH ←	NADH:quinone oxidoreductase subunit H

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,397,384	0	A	G	100.0%	1053.0 / NA	253	V20A (GTG→GCG)	nuoH	NADH:quinone oxidoreductase subunit H
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (110/143); total (110/143)

Only 100 of 257 total aligned reads displayed.

CAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGATGCGCGCCAGCC  >  NC_000913/2397286‑2397481

cAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATcgcc                                                                                                 <  1:3905058/101‑1 (MQ=255)

  acacGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATcgccac                                                                                               >  1:3905387/1‑101 (MQ=255)

      ggTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCt                                                                                           <  1:3904676/101‑1 (MQ=255)

       gTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCtt                                                                                          <  2:3904973/101‑1 (MQ=255)

        ttAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCttt                                                                                         >  2:3905389/1‑101 (MQ=255)

        ttAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACAACCAGCAGGATCGCCACCGCttt                                                                                         <  1:3905126/101‑1 (MQ=255)

         tAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTg                                                                                        <  1:3905043/101‑1 (MQ=255)

               cGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATg                                                                                  <  1:3904947/101‑1 (MQ=255)

               cGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATg                                                                                  >  1:3905395/1‑101 (MQ=255)

               cGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATg                                                                                  >  2:3905394/1‑101 (MQ=255)

                 tAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGt                                                                                <  2:3904922/101‑1 (MQ=255)

                   aCGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTca                                                                              >  2:3905398/1‑101 (MQ=255)

                    cGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTcag                                                                             >  2:3905400/1‑101 (MQ=255)

                    cGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTcag                                                                             <  1:3904874/101‑1 (MQ=255)

                     ggTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTcagc                                                                            >  1:3905403/1‑101 (MQ=255)

                     ggTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTcagc                                                                            >  2:3905405/1‑101 (MQ=255)

                      gTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCCCCGCTTTGAGGATGGTcagca                                                                           <  2:3904971/101‑1 (MQ=255)

                      gTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTcagca                                                                           <  1:3905071/101‑1 (MQ=255)

                      gTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTcagca                                                                           <  2:3905021/101‑1 (MQ=255)

                      gTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTcagca                                                                           <  1:3904964/101‑1 (MQ=255)

                       ttCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTcagcag                                                                          <  1:3905110/101‑1 (MQ=255)

                          tGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGAt                                                                       >  2:3905410/1‑101 (MQ=255)

                          tGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGAt                                                                       >  1:3905407/1‑101 (MQ=255)

                          tGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGCAt                                                                       <  1:3904776/101‑1 (MQ=255)

                                aGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAAt                                                                 >  1:3905416/1‑101 (MQ=255)

                                aGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAAt                                                                 <  2:3905142/101‑1 (MQ=255)

                                aGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAAt                                                                 <  1:3904694/101‑1 (MQ=255)

                                 gACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATc                                                                <  2:3904855/101‑1 (MQ=255)

                                   cccAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAg                                                              >  1:3905419/1‑101 (MQ=255)

                                    ccAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGt                                                             >  2:3905420/1‑101 (MQ=255)

                                      agcagGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTc                                                           <  1:3905065/101‑1 (MQ=255)

                                      agcagGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTc                                                           >  2:3905422/1‑101 (MQ=255)

                                       gcagGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTcc                                                          <  2:3905057/101‑1 (MQ=255)

                                         agGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCgg                                                        <  2:3904895/101‑1 (MQ=255)

                                         agGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCgg                                                        <  1:3905154/101‑1 (MQ=255)

                                          ggCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGt                                                       <  1:3904817/101‑1 (MQ=255)

                                           gCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTg                                                      <  2:3904931/101‑1 (MQ=255)

                                            cGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGa                                                     <  2:3905102/101‑1 (MQ=255)

                                             gACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGat                                                    >  1:3905428/1‑101 (MQ=255)

                                             gACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGat                                                    >  1:3905430/1‑101 (MQ=255)

                                             gACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGat                                                    <  2:3904943/101‑1 (MQ=255)

                                             gACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGat                                                    >  2:3905427/1‑101 (MQ=255)

                                              aCGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGata                                                   <  2:3905015/101‑1 (MQ=255)

                                               cGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGt                                                       <  2:3904966/96‑1 (MQ=255)

                                               cGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGatat                                                  <  1:3904914/101‑1 (MQ=255)

                                               cGTTCGCCAAAGCTCATGAATGCCCCGCAGGGGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGatat                                                  >  1:3905433/1‑101 (MQ=255)

                                                gTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATc                                                 >  2:3905438/1‑101 (MQ=255)

                                                  tCGCCAAAGGTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCa                                               >  1:3905439/1‑101 (MQ=255)

                                                   cGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCaa                                              >  2:3905441/1‑101 (MQ=255)

                                                    gCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAAc                                             >  1:3905444/1‑101 (MQ=255)

                                                     ccAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACt                                            >  2:3905449/1‑101 (MQ=255)

                                                     ccAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACt                                            >  1:3905448/1‑101 (MQ=255)

                                                     ccAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACt                                            <  2:3904977/101‑1 (MQ=255)

                                                      cAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTc                                           <  2:3905085/101‑1 (MQ=255)

                                                       aaaGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCa                                          <  2:3905369/101‑1 (MQ=255)

                                                        aaGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCAt                                         >  2:3905453/1‑101 (MQ=255)

                                                        aaGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCAt                                         >  1:3905452/1‑101 (MQ=255)

                                                        aaGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCAt                                         <  1:3905136/101‑1 (MQ=255)

                                                         aGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCAtt                                        <  2:3904992/101‑1 (MQ=255)

                                                          gCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCAttg                                       >  1:3905457/1‑101 (MQ=255)

                                                           cTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCAttgt                                      <  2:3904700/101‑1 (MQ=255)

                                                            tCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCAttgtt                                     >  2:3905459/1‑101 (MQ=255)

                                                              aTGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCAttgt                                      <  2:3905156/98‑1 (MQ=255)

                                                              aTGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATtgttgt                                   <  2:3905012/101‑1 (MQ=255)

                                                              aTGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATtgttgt                                   >  1:3905461/1‑101 (MQ=255)

                                                              aTGAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATtgttgt                                   <  1:3905006/101‑1 (MQ=255)

                                                                gAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTtgtg                                  <  1:3905028/100‑1 (MQ=255)

                                                                gAATGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGc                                 <  1:3905290/101‑1 (MQ=255)

                                                                 aaTGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGcc                                <  1:3904880/101‑1 (MQ=255)

                                                                 aaTGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGcc                                >  2:3905464/1‑101 (MQ=255)

                                                                  aTGCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGcct                               <  1:3904918/101‑1 (MQ=255)

                                                                    gCCCCGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGcctcc                             >  2:3905468/1‑101 (MQ=255)

                                                                     ccccGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGcctcct                            <  1:3905023/101‑1 (MQ=255)

                                                                     ccccGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGcctcct                            <  2:3904985/101‑1 (MQ=255)

                                                                      cccGCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCtt                           >  1:3905469/1‑101 (MQ=255)

                                                                         gCAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTgag                        >  2:3905472/1‑101 (MQ=255)

                                                                          cAGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTgaga                       >  2:3905474/1‑101 (MQ=255)

                                                                           aGGTGACAACCACTAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGAt                      >  1:3905478/1‑101 (MQ=255)

                                                                           aGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGAt                      <  1:3905092/101‑1 (MQ=255)

                                                                           aGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGAt                      <  2:3905074/101‑1 (MQ=255)

                                                                           aGGTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGAt                      <  2:3904997/101‑1 (MQ=255)

                                                                            ggTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATc                     <  1:3904967/101‑1 (MQ=255)

                                                                            ggTGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATc                     <  2:3905081/101‑1 (MQ=255)

                                                                              tGACAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCt                   >  1:3905481/1‑101 (MQ=255)

                                                                                aCAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATc                                                                >  2:3905482/1‑54 (MQ=255)

                                                                                 cAACCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCaa                <  2:3904951/101‑1 (MQ=255)

                                                                                  aaCCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAg               <  1:3905183/101‑1 (MQ=255)

                                                                                  aaCCACCAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAg               >  2:3905484/1‑101 (MQ=255)

                                                                                   accaccAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGa              <  1:3905079/101‑1 (MQ=255)

                                                                                   accaccAGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGa              <  1:3905116/101‑1 (MQ=255)

                                                                                    ccaccaGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGAt             >  1:3905488/1‑101 (MQ=255)

                                                                                     caccaGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGATg            <  2:3905119/101‑1 (MQ=255)

                                                                                     caccaGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGATg            >  2:3905490/1‑101 (MQ=255)

                                                                                     caccaGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGATg            >  2:3905493/1‑101 (MQ=255)

                                                                                      accaGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGATgc           <  1:3905169/101‑1 (MQ=255)

                                                                                       ccaGCAGGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGATgcg          >  1:3905495/1‑101 (MQ=255)

                                                                                         agcagGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGATgcgcg        >  2:3905498/1‑101 (MQ=255)

                                                                                            agGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGATGCGCgcca     <  2:3904948/101‑1 (MQ=255)

                                                                                            agGATCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGATGCGCgcca     >  1:3905501/1‑101 (MQ=255)

                                                                                               aTCGCCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGATGCGCgccagcc  <  2:3905234/101‑1 (MQ=255)

CAACACGGTTAGGTCCGTAACGGTTCTGGAACAGACCCAGCAGGCGACGTTCGCCAAAGCTCATGAATGCCCCGCAGGTGACAACCACCAGCAGGATCACCACCGCTTTGAGGATGGTCAGCAGGATCTCAATCAGTTCCGGTGATATCCAACTCATTGTTGTGCCTCCTTGAGATCCTCAAGATGCGCGCCAGCC  >  NC_000913/2397286‑2397481

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`