BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,040,839	T→C	T78A (ACA→GCA)	sdhE ←	FAD assembly factor

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,040,839	0	T	C	100.0%	1119.3 / NA	271	T78A (ACA→GCA)	sdhE	FAD assembly factor
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (146/125); total (146/125)

Only 100 of 273 total aligned reads displayed.

CAGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGTCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGA  >  NC_000913/3040742‑3040936

cAGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTg                                                                                                >  2:4959131/1‑101 (MQ=255)

 aGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTgg                                                                                               <  1:4958541/101‑1 (MQ=255)

  gCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGa                                                                                              <  2:4958710/101‑1 (MQ=255)

  gCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGa                                                                                              <  1:4958695/101‑1 (MQ=255)

  gCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGa                                                                                              >  1:4959135/1‑101 (MQ=255)

   cGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGAt                                                                                             <  1:4958925/101‑1 (MQ=255)

    ggCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATg                                                                                            <  2:4958656/101‑1 (MQ=255)

     gCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGa                                                                                           <  1:4958641/101‑1 (MQ=255)

       aaCCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGt                                                                                         <  2:4958945/101‑1 (MQ=255)

       aaCCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGt                                                                                         >  2:4959140/1‑101 (MQ=255)

       aaCCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGt                                                                                         >  1:4677350/1‑101 (MQ=255)

       aaCCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGt                                                                                         <  1:4958647/101‑1 (MQ=255)

        aCCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTc                                                                                        >  2:4959143/1‑101 (MQ=255)

         ccAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCg                                                                                       >  2:4959148/1‑101 (MQ=255)

         ccAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCg                                                                                       >  1:4959145/1‑101 (MQ=255)

           aGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGa                                                                                     >  2:4959154/1‑101 (MQ=255)

           aGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGa                                                                                     >  1:4959157/1‑101 (MQ=255)

           aGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGa                                                                                     >  1:4959155/1‑101 (MQ=255)

           aGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGa                                                                                     >  1:4959150/1‑101 (MQ=255)

           aGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGa                                                                                     <  1:4959096/101‑1 (MQ=255)

            gCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGAc                                                                                    >  2:4959161/1‑101 (MQ=255)

              ccATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACca                                                                                  >  2:4959165/1‑101 (MQ=255)

                 tGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACcatca                                                                               >  1:4959168/1‑101 (MQ=255)

                   aaTCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCAtt                                                                             >  2:4959172/1‑101 (MQ=255)

                     tCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTc                                                                           >  1:4959175/1‑101 (MQ=255)

                      cAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTcc                                                                          <  2:4958781/101‑1 (MQ=255)

                       aGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCa                                                                         >  2:4959177/1‑101 (MQ=255)

                       aGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCa                                                                         >  1:4959179/1‑101 (MQ=255)

                        gCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAg                                                                        <  2:4958831/101‑1 (MQ=255)

                          aaGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGtt                                                                      <  2:4958724/101‑1 (MQ=255)

                           aGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTc                                                                     >  2:4959182/1‑101 (MQ=255)

                               aaGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCa                                                                 >  2:4959186/1‑101 (MQ=255)

                               aaGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCa                                                                 <  1:4958606/101‑1 (MQ=255)

                                aGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCAt                                                                >  1:4959188/1‑101 (MQ=255)

                                aGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCAt                                                                <  1:4958750/101‑1 (MQ=255)

                                aGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCAt                                                                <  2:4958744/101‑1 (MQ=255)

                                  ccACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCg                                                              >  1:4959192/1‑101 (MQ=255)

                                   cACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCgg                                                             >  2:4959194/1‑101 (MQ=255)

                                     cTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGcc                                                           <  2:4958865/101‑1 (MQ=255)

                                       gtgCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCgg                                                         <  2:4958688/101‑1 (MQ=255)

                                       gtgCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCgg                                                         >  2:4959197/1‑101 (MQ=255)

                                         gcgcgcCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGtt                                                       >  2:4959199/1‑101 (MQ=255)

                                           gcgcCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTa                                                     <  2:4958839/101‑1 (MQ=255)

                                             gcCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTGCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTAcc                                                   <  2:4958670/101‑1 (MQ=255)

                                              ccAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCg                                                  <  2:4958603/101‑1 (MQ=255)

                                               cAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGt                                                 <  1:4958866/101‑1 (MQ=255)

                                               cAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGt                                                 >  2:4959203/1‑101 (MQ=255)

                                                aGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTg                                                >  1:4959205/1‑101 (MQ=255)

                                                 ggAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTAcc                                                   >  1:4959207/1‑97 (MQ=255)

                                                 ggAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGa                                               <  1:4958790/101‑1 (MQ=255)

                                                    gaCGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATtc                                            <  1:4958771/101‑1 (MQ=255)

                                                    gaCGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATtc                                            <  2:4958546/101‑1 (MQ=255)

                                                     aCGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATtca                                           >  1:4959211/1‑101 (MQ=255)

                                                      cgcgCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATtcat                                          >  1:4959214/1‑101 (MQ=255)

                                                       gcgcAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATtcatc                                         >  1:4959217/1‑101 (MQ=255)

                                                       gcgcAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATtcatc                                         >  2:4959216/1‑101 (MQ=255)

                                                        cgcAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATtcatca                                        <  1:4958677/101‑1 (MQ=255)

                                                        cgcAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATtcatca                                        >  2:4959220/1‑101 (MQ=255)

                                                         gcAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATTCATCAg                                       <  1:4958798/101‑1 (MQ=255)

                                                          cAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATTCATCAGc                                      >  1:4959224/1‑101 (MQ=255)

                                                          cAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATTCACCAGc                                      >  2:4959225/1‑101 (MQ=255)

                                                           aaaTCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATTCATCAGcc                                     >  2:4959229/1‑101 (MQ=255)

                                                            aaTCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCgg                                                                                      <  2:4958434/51‑1 (MQ=255)

                                                            aaTCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCa                                    <  1:4958701/101‑1 (MQ=255)

                                                            aaTCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCa                                    <  1:4959164/101‑1 (MQ=255)

                                                             aTCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAg                                   >  1:4959233/1‑101 (MQ=255)

                                                             aTCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAg                                   <  1:4958739/101‑1 (MQ=255)

                                                              tCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGt                                  <  2:4958727/101‑1 (MQ=255)

                                                                aGATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTa                                >  2:4959234/1‑101 (MQ=255)

                                                                 gATTGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTaa                               <  1:4958764/101‑1 (MQ=255)

                                                                   ttGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTa                                >  2:4959238/1‑98 (MQ=255)

                                                                   ttGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAAc                             <  1:4958729/101‑1 (MQ=255)

                                                                   ttGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAAc                             <  1:4958903/101‑1 (MQ=255)

                                                                    tGCCACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACa                            >  1:4959239/1‑101 (MQ=255)

                                                                      ccACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAgg                          <  2:4958794/101‑1 (MQ=255)

                                                                      ccACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAgg                          <  2:4958648/101‑1 (MQ=255)

                                                                      ccACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAgg                          >  2:4959243/1‑101 (MQ=255)

                                                                      ccACAGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAgg                          <  1:4958947/101‑1 (MQ=255)

                                                                       cacaGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGt                         <  1:4958837/101‑1 (MQ=255)

                                                                        acaGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTc                        >  2:4959246/1‑101 (MQ=255)

                                                                        acaGGACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTc                        >  1:4959247/1‑101 (MQ=255)

                                                                            gACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGa                    <  2:4958985/101‑1 (MQ=255)

                                                                            gACCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGa                    <  1:4958721/101‑1 (MQ=255)

                                                                             aCCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGAt                   <  2:4958878/101‑1 (MQ=255)

                                                                             aCCACGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGAt                   <  1:4958707/101‑1 (MQ=255)

                                                                                aCGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGt                >  1:4959252/1‑101 (MQ=255)

                                                                                 cGTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATc                  >  2:4959254/1‑98 (MQ=255)

                                                                                  gTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTca              >  1:4959256/1‑101 (MQ=255)

                                                                                  gTTCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTca              >  1:4959260/1‑101 (MQ=255)

                                                                                   ttCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTcac             >  1:4959262/1‑101 (MQ=255)

                                                                                    tCCCGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTcaca            >  2:4959265/1‑101 (MQ=255)

                                                                                     cccGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACAt           <  2:4958642/101‑1 (MQ=255)

                                                                                      ccGGTTCCGTGCCTGGATGCGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGtt                                                       >  2:4959270/1‑56 (MQ=255)

                                                                                      ccGGTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACAtt          >  1:4959268/1‑101 (MQ=255)

                                                                                        ggTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTcc        <  1:4958807/101‑1 (MQ=255)

                                                                                         gTTCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCca       >  2:4959274/1‑101 (MQ=255)

                                                                                          ttCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCcag      >  1:4959275/1‑101 (MQ=255)

                                                                                           tCCGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCcagc     <  1:4958828/101‑1 (MQ=255)

                                                                                             cGTGCCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCcagcag   >  1:4959279/1‑101 (MQ=255)

                                                                                              gtgcCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGa  <  1:4958779/101‑1 (MQ=255)

CAGCGGCAACCAGCCCATGAATCAGCAAGGAAAGCCACTGTGCGCGCCAGGAGACGCGCAAATCAGATTGCCACAGGACCACGTTCCCGGTTCCGTGTCTGGATGAGTCGGACCATCATTTCCAGTTCTGCATCGGCCGGTTTACCGTGATTCATCAGCCAGTTAAACAGGTCCGGATCGTCACATTCCAGCAGA  >  NC_000913/3040742‑3040936

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`