BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,241,426	T→C	T107A (ACC→GCC)	ygjV ←	inner membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,241,426	0	T	C	100.0%	1294.1 / NA	309	T107A (ACC→GCC)	ygjV	inner membrane protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (169/140); total (169/140)

Only 100 of 309 total aligned reads displayed.

TATCGACCCCGCCCAGAAGTTGTGAATCACCCAGCAACACGTTGAAAACCACATTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGTACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGCCAATTCCGCCAGTCAGCACAATAAAAATCGCCATTACC  >  NC_000913/3241328‑3241523

   cGACCCCGCCCAGAAGTTGTGAATCACCCAGCAACACGTTGAAAACCACATTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGa                                                                                              >  1:5299197/1‑101 (MQ=255)

    gACCCCGCCCAGAAGTTGTGAATCACCCAGCAACACGTTGAAAACCACATTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGAc                                                                                             >  2:5299198/1‑101 (MQ=255)

      ccccGCCCAGAAGTTGTGAATCACCCAGCAACACGTTGAAAACCACATTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACaa                                                                                           <  1:5298712/101‑1 (MQ=255)

        ccGCCCAGAAGTTGTGAATCACCCAGCAACACGTTGAAAACCACATTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATc                                                                                         >  2:5299203/1‑101 (MQ=255)

        ccGCCCAGAAGTTGTGAATCACCCAGCAACACGTTGAAAACCACATTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATc                                                                                         <  2:5298699/101‑1 (MQ=255)

          gCCCAGAAGTTGTGAATCACCCAGCAACACGTTGAAAACCGCATTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGt                                                                                       >  2:5299208/1‑101 (MQ=255)

          gCCCAGAAGTTGTGAATCACCCAGCAACACGTTGAAAACCACATTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGt                                                                                       >  1:5299207/1‑101 (MQ=255)

            ccAGAAGTTGTGAATCACCCAGCAACACGTTGAAAACCACATTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGc                                                                                     >  1:5299212/1‑101 (MQ=255)

            ccAGAAGTTGTGAATCACCCAGCAACACGTTGAAAACCACATTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGc                                                                                     <  2:5298947/101‑1 (MQ=255)

                 aGTTGTGAATCACCCAGCAACACGTTGAAAACCACATTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATa                                                                                >  2:5299218/1‑101 (MQ=255)

                   ttGTGAATCACCCAGCAACACGTTGAAAACCACATTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAAc                                                                              >  1:5299221/1‑101 (MQ=255)

                   ttGTGAATCACCCAGCAACACGTTGAAAACCACATTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAAc                                                                              <  1:5298619/101‑1 (MQ=255)

                   ttGTGAATCACCCAGCAACACGTTGAAAACCACATTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAAc                                                                              >  2:5299223/1‑101 (MQ=255)

                     gtgAATCACCCAGCAACACGTTGAAAACCACATTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCg                                                                            <  2:5298848/101‑1 (MQ=255)

                     gtgAATCACCCAGCAACACGTTGAAAACCACATTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCg                                                                            >  1:5299227/1‑101 (MQ=255)

                      tgAATCACCCAGCAACACGTTGAAAACCACATTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAAc                                                                              >  1:5299233/1‑98 (MQ=255)

                      tgAATCACCCAGCAACACGTTGAAAACCACATTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCgg                                                                           >  2:5299231/1‑101 (MQ=255)

                       gAATCACCCAGCAACACGTTGAAAACCACATTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGc                                                                          <  2:5298601/101‑1 (MQ=255)

                        aaTCACCCAGCAACACGTTGAAAACCACATTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCa                                                                         <  2:5298537/101‑1 (MQ=255)

                        aaTCACCCAGCAACACGTTGAAAACCACATTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCa                                                                         >  2:5299236/1‑101 (MQ=255)

                          tCACCCAGCAACACGTTGAAAACCACATTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAAt                                                                       <  2:5298606/101‑1 (MQ=255)

                            aCCCAGCAACACGTTGAAAACCACATTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAg                                                                     >  2:5299241/1‑101 (MQ=255)

                             cccAGCAACACGTTGAAAACCACATTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGt                                                                    <  2:5298820/101‑1 (MQ=255)

                               cAGCAACACGTTGAAAACCACATTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTc                                                                  <  2:5298808/101‑1 (MQ=255)

                                aGCAACACGTTGAAAACCACATTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCg                                                                 >  1:5299244/1‑101 (MQ=255)

                                aGCAACACGTTGAAAACCACATTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCg                                                                 <  1:5298748/101‑1 (MQ=255)

                                 gCAACACGTTGAAAACCACATTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGa                                                                <  1:5298552/101‑1 (MQ=255)

                                  cAACACGTTGAAAACCACATTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGAc                                                               >  1:5299247/1‑101 (MQ=255)

                                    acacGTTGAAAACCACATTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAg                                                             <  2:5298673/101‑1 (MQ=255)

                                    acacGTTGAAAACCACATTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAg                                                             >  2:5299251/1‑101 (MQ=255)

                                      acGTTGAAAACCACATTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGAc                                                               >  1:5299255/1‑97 (MQ=255)

                                      acGTTGAAAACCACATTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGga                                                           <  2:5298769/101‑1 (MQ=255)

                                      acGTTGAAAACCACATTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGga                                                           >  2:5299254/1‑101 (MQ=255)

                                       cGTTGAAAACCACATTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGgat                                                          <  1:5298804/101‑1 (MQ=255)

                                        gTTGAAAACCACATTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGgatg                                                         >  1:5299259/1‑101 (MQ=255)

                                        gTTGAAAACCACATTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGgatg                                                         >  2:5299261/1‑101 (MQ=255)

                                          tGAAAACCACATTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGgatgat                                                       <  1:5298948/101‑1 (MQ=255)

                                           gAAAACCACATTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGatgatg                                                      <  1:5298771/101‑1 (MQ=255)

                                            aaaaCCACATTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATgg                                                     >  2:5299265/1‑101 (MQ=255)

                                             aaaCCACATTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGa                                                    <  1:5299088/101‑1 (MQ=255)

                                              aaCCACATTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGaa                                                   >  1:5299269/1‑101 (MQ=255)

                                                ccACATTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACt                                                 <  2:5298742/101‑1 (MQ=255)

                                                ccACATTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACt                                                 >  2:5299271/1‑101 (MQ=255)

                                                 cacaTTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACtt                                                <  1:5298656/101‑1 (MQ=255)

                                                  acaTTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTc                                               <  1:5298571/101‑1 (MQ=255)

                                                  acaTTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTc                                               <  2:5298655/101‑1 (MQ=255)

                                                  acaTTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTc                                               <  1:5298829/101‑1 (MQ=255)

                                                   caTTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTcg                                              <  2:5298733/101‑1 (MQ=255)

                                                    aTTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTcgc                                             <  1:5298625/101‑1 (MQ=255)

                                                     ttACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTcgcg                                            >  2:5299277/1‑101 (MQ=255)

                                                     ttACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTcgc                                             >  1:5299279/1‑100 (MQ=255)

                                                      tACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGa                                           >  2:5299283/1‑101 (MQ=255)

                                                       aCGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAg                                          >  1:5299284/1‑101 (MQ=255)

                                                        cGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAgg                                         <  2:5298706/101‑1 (MQ=255)

                                                         gCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGc                                        >  2:5299289/1‑101 (MQ=255)

                                                         gCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGc                                        >  1:5299292/1‑101 (MQ=255)

                                                          cAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGcc                                       >  2:5299294/1‑101 (MQ=255)

                                                           aGCGCATGGTCAGCCCTTTACAGCGGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGCCa                                      <  2:5298756/101‑1 (MQ=255)

                                                           aGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGCCa                                      <  2:5298685/101‑1 (MQ=255)

                                                           aGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGCCa                                      >  2:5299297/1‑101 (MQ=255)

                                                            gcgcATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGCCaa                                     <  1:5298436/101‑1 (MQ=255)

                                                            gcgcATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGCCaa                                     <  2:5298792/101‑1 (MQ=255)

                                                            gcgcATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGCCaa                                     >  1:5299300/1‑101 (MQ=255)

                                                              gcATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTg                                                                                      >  1:5299306/1‑50 (MQ=255)

                                                              gcATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGCCAAtt                                   >  2:5299304/1‑101 (MQ=255)

                                                               cATGGTCAGCCCGTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACt                                                 <  2:5298860/86‑1 (MQ=255)

                                                                aTGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGCCAATTc                                  >  2:5299310/1‑100 (MQ=255)

                                                                   gTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGCCAATTCCGcc                              <  1:5298790/101‑1 (MQ=255)

                                                                   gTCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGCCAATTCCGcc                              <  1:5298704/101‑1 (MQ=255)

                                                                    tCAGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGCCAATTCCGCCa                             >  1:5299313/1‑101 (MQ=255)

                                                                      aGCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGCCAATTCCGCCAGt                           >  1:5299317/1‑101 (MQ=255)

                                                                       gCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGCCAATTCCGCCAGTc                          >  1:5299320/1‑101 (MQ=255)

                                                                       gCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGCCAATTCCGCCAGTc                          >  2:5299321/1‑101 (MQ=255)

                                                                       gCCCTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGCCAATTCCGCCAGTc                          <  1:5298677/101‑1 (MQ=255)

                                                                        cccTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGCCAATTCCGCCAGTCa                         <  2:5298988/101‑1 (MQ=255)

                                                                        cccTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGCCAATTCCGCCAGTCa                         <  1:5298897/101‑1 (MQ=255)

                                                                          cTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGCCAATTCCGCCAGTCAGc                       <  1:5299215/101‑1 (MQ=255)

                                                                          cTTTACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGCCAATTCCGCCAGTCAGc                       <  2:5298890/101‑1 (MQ=255)

                                                                           tttACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGCCAATTCCGCCAGTCAGca                      >  2:5299326/1‑101 (MQ=255)

                                                                           tttACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGCCAATTCCGCCAGTCAGca                      <  2:5299133/101‑1 (MQ=255)

                                                                           tttACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGCCAATTCCGCCAGTCAGca                      >  1:5299328/1‑101 (MQ=255)

                                                                            ttACAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGc                                        >  2:5299330/1‑82 (MQ=255)

                                                                              aCAGCAGAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGCCAATTCCGCCAGTCAGCACaa                   <  2:5298718/101‑1 (MQ=255)

                                                                               cagcagAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGCCAATTCCGCCAGTCAGCACAAt                  <  2:5298828/101‑1 (MQ=255)

                                                                               cagcagAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGCCAATTCCGCCAGTCAGCACAAt                  <  1:5298604/101‑1 (MQ=255)

                                                                                agcagAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGCCAATTCCGCCAGTCAGCACAATa                 >  2:5299334/1‑101 (MQ=255)

                                                                                  cagAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGCCAATTCCGCCAGTCAGCACAATaaa               >  2:5299337/1‑101 (MQ=255)

                                                                                  cagAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGCCAATTCCGCCAGTCAGCACAATaaa               <  1:5298930/101‑1 (MQ=255)

                                                                                   agAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGCCAATTCCGCCAGTCAGCACAATaaaa              <  1:5298863/101‑1 (MQ=255)

                                                                                    gAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGCCAATTCCGCCAGTCAGCACAATaaaaa             >  1:5299342/1‑101 (MQ=255)

                                                                                    gAATAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGCCAATTCCGCCAGTCAGCACAATaaaaa             >  2:5299341/1‑101 (MQ=255)

                                                                                      aTAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGCCAATTCCGCCAGTCAGCACAATaaaa              >  2:5299347/1‑98 (MQ=255)

                                                                                      aTAGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGCCAATTCCGCCAGTCAGCACAATAAAAATc           <  2:5298644/101‑1 (MQ=255)

                                                                                        aGCGCCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGCCAATTCCGCCAGTCAGCACAATAAAAATCGc         >  2:5299350/1‑101 (MQ=255)

                                                                                         gcgcCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGCCAATTCCGCCAGTCAGCACAATAAAAATCGcc        >  1:5299351/1‑101 (MQ=255)

                                                                                           gcCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGCCAATTcc                                 <  1:5298630/74‑1 (MQ=255)

                                                                                           gcCCAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGCCAATTCCGCCAGTCAGCACAATAAAAATCGCCAt      >  1:5299357/1‑101 (MQ=255)

                                                                                            cccAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGCCAAt                                    <  1:5298646/70‑1 (MQ=255)

                                                                                            cccAGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGCCAATTCCGCCAGTCAGCACAATAAAAATCGCCAtt     >  2:5299359/1‑101 (MQ=255)

                                                                                               aGGCACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGCCAATTCCGCCAGTCAGCACAATAAAAATCGCCATTAcc  >  1:5299363/1‑101 (MQ=255)

TATCGACCCCGCCCAGAAGTTGTGAATCACCCAGCAACACGTTGAAAACCACATTACGCAGCGCATGGTCAGCCCTTTACAGCAGAATAGCGCCCAGGTACTGACAATCGTGCCGATAACCGGCAATAGTTCGACAGGATGATGGAACTTCGCGAGGCCAATTCCGCCAGTCAGCACAATAAAAATCGCCATTACC  >  NC_000913/3241328‑3241523

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`