Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,152,085 T→C E338E (GAA→GAG ppc ← phosphoenolpyruvate carboxylase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,152,0850TC100.0% 1050.8 / NA 257E338E (GAA→GAGppcphosphoenolpyruvate carboxylase
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (136/121);  total (136/121)

Only 100 of 269 total aligned reads displayed.

ATAATACCCATGCCACACGCCTGAAGTGACTGGTAGCAAGCGTAGAGCGGTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGTTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAGGTTTTTCATCAGATAGCGATACGGTTCTGCGGCACCTT  >  NC_000913/4151987‑4152182
                                                                                                  |                                                                                                 
ataataCCCATGCCACACGCCTGAAGTGACTGGTAGCAAGCGTAGAGCGGTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGctc                                                                                                 >  1:6842342/1‑101 (MQ=255)
   ataCCCATGCCACACGCCTGAAGTGACTGGTAGCAAGCGTAGAGCGGTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGctcttc                                                                                              <  2:6841800/101‑1 (MQ=255)
   ataCCCATGCCACACGCCTGAAGTGACTGGTAGCAAGCGTAGAGCGGTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGctcttc                                                                                              <  1:6841989/101‑1 (MQ=255)
    taCCCATGCCACACGCCTGAAGTGACTGGTAGCAAGCGTAGAGCGGTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCg                                                                                             >  2:6842346/1‑101 (MQ=255)
    taCCCATGCCACACGCCTGAAGTGACTGGTAGCAAGCGTAGAGCGGTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCg                                                                                             >  1:6842347/1‑101 (MQ=255)
       ccATGCCACACGCCTGAAGTGACTGGTAGCAAGCGTAGAGCGGTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCt                                                                                          <  2:6841939/101‑1 (MQ=255)
         aTGCCACACGCCTGAAGTGACTGGTAGCAAGCGTAGAGCGGTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCttt                                                                                        >  2:6842352/1‑101 (MQ=255)
         aTGCCACACGCCTGAAGTGACTGGTAGCAAGCGTAGAGCGGTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCttt                                                                                        >  2:6842355/1‑101 (MQ=255)
         aTGCCACACGCCTGAAGTGACTGGTAGCAAGCGTAGAGCGGTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCttt                                                                                        <  1:6841992/101‑1 (MQ=255)
         aTGCCACACGCCTGAAGTGACTGGTAGCAAGCGTAGAGCGGTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCttt                                                                                        >  1:6842353/1‑101 (MQ=255)
          tGCCACACGCCTGAAGTGACTGGTAGCAAGCGTAGAGCGGTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGctctt                                                                                               >  2:6842359/1‑93 (MQ=255)
           gCCACACGCCTGAAGTGACTGGTAGCAAGCGTAGAGCGGTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCa                                                                                      <  2:6842156/101‑1 (MQ=255)
           gCCACACGCCTGAAGTGACTGGTAGCAAGCGTAGAGCGGTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCa                                                                                      >  1:6842361/1‑101 (MQ=255)
            ccACACGCCTGAAGTGACTGGTAGCAAGCGTAGAGCGGTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAg                                                                                     <  1:6841787/101‑1 (MQ=255)
            ccACACGCCTGAAGTGACTGGTAGCAAGCGTAGAGCGGTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAg                                                                                     >  1:6842364/1‑101 (MQ=255)
             cacaCGCCTGAAGTGACTGGTAGCAAGCGTAGAGCGGTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAgg                                                                                    >  2:6842369/1‑101 (MQ=255)
             cacaCGCCTGAAGTGACTGGTAGCAAGCGTAGAGCGGTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAgg                                                                                    <  2:6842037/101‑1 (MQ=255)
             cacaCGCCTGAAGTGACTGGTAGCAAGCGTAGAGCGGTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAgg                                                                                    <  2:6842136/101‑1 (MQ=255)
             cacaCGCCTGAAGTGACTGGTAGCAAGCGTAGAGCGGTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAgg                                                                                    >  1:6842368/1‑101 (MQ=255)
              acacGCCTGAAGTGACTGGTAGCAAGCGTAGAGCGGTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGgc                                                                                   <  1:6841934/101‑1 (MQ=255)
               cacGCCTGAAGTGACTGGTAGCAAGCGTAGAGCGGTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGgcg                                                                                  <  2:6841847/101‑1 (MQ=255)
                 cGCCTGAAGTGACTGGTAGCAAGCGTAGAGCGGTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGgcgcg                                                                                >  1:6842374/1‑101 (MQ=255)
                 cGCCTGAAGTGACTGGTAGCAAGCGTAGAGCGGTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGgcgcg                                                                                <  1:6841969/101‑1 (MQ=255)
                  gCCTGAAGTGACTGGTAGCAAGCGTAGAGCGGTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGgcgcgc                                                                               <  1:6841955/101‑1 (MQ=255)
                    cTGAAGTGACTGGTAGCAAGCGTAGAGCGGTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCtt                                                                             <  2:6842125/101‑1 (MQ=255)
                    cTGAAGTGACTGGTAGCAAGCGTAGAGCGGTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCtt                                                                             <  1:6842203/101‑1 (MQ=255)
                       aaGTGACTGGTAGCAAGCGTAGAGCGGTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCa                                                                          <  2:6842056/101‑1 (MQ=255)
                        aGTGACTGGTAGCAAGCGTAGAGCGGTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAg                                                                         >  1:6842377/1‑101 (MQ=255)
                         gTGACTGGTAGCAAGCGTAGAGCGGTTCCCACAGTTCTTCGTTTTGTGTCAGCGGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGc                                                                        >  2:6842379/1‑101 (MQ=255)
                          tGACTGGTAGCAAGCGTAGAGCGGTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGcc                                                                       <  2:6842082/101‑1 (MQ=255)
                           gACTGGTAGCAAGCGTAGAGCGGTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCa                                                                      <  1:6842038/101‑1 (MQ=255)
                               ggTAGCAAGCGTAGAGCGGTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGcc                                                                  >  2:6842381/1‑101 (MQ=255)
                                    cAAGCGTAGAGCGGTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTgtgt                                                             >  2:6842384/1‑101 (MQ=255)
                                       gCGTAGAGCGGTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGc                                                          >  2:6842387/1‑101 (MQ=255)
                                        cGTAGAGCGGTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGcc                                                         >  1:6842388/1‑101 (MQ=255)
                                             agCGGTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAg                                                    <  2:6842100/101‑1 (MQ=255)
                                             agCGGTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAg                                                    >  1:6842392/1‑101 (MQ=255)
                                             agCGGTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAg                                                    <  2:6842018/101‑1 (MQ=255)
                                               cGGTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGc                                                  >  2:6842393/1‑101 (MQ=255)
                                                ggTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCg                                                 <  2:6841975/101‑1 (MQ=255)
                                                ggTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCg                                                 <  1:6842153/101‑1 (MQ=255)
                                                ggTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCg                                                 >  1:6842397/1‑101 (MQ=255)
                                                 gTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCga                                                >  2:6842399/1‑101 (MQ=255)
                                                 gTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCga                                                <  1:6842135/101‑1 (MQ=255)
                                                 gTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCga                                                <  2:6842216/101‑1 (MQ=255)
                                                  ttCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCgag                                               >  1:6842403/1‑101 (MQ=255)
                                                  ttCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCgag                                               >  2:6842405/1‑101 (MQ=255)
                                                  ttCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCgag                                               <  1:6841816/101‑1 (MQ=255)
                                                   tCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCgaga                                              >  2:6842408/1‑101 (MQ=255)
                                                   tCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCgaga                                              <  2:6842174/101‑1 (MQ=255)
                                                     ccACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAAc                                            >  2:6842411/1‑101 (MQ=255)
                                                       acaGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGc                                          <  1:6842027/101‑1 (MQ=255)
                                                        caGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCa                                         <  1:6841841/101‑1 (MQ=255)
                                                        caGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCa                                         >  2:6842414/1‑101 (MQ=255)
                                                          gTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAgg                                       <  1:6842236/101‑1 (MQ=255)
                                                          gTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAgg                                       >  1:6842416/1‑101 (MQ=255)
                                                           ttcttcGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAGGt                                      >  2:6842417/1‑101 (MQ=255)
                                                           ttcttcGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAGGt                                      <  2:6841925/101‑1 (MQ=255)
                                                           ttcttcGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAGGt                                      >  2:6842420/1‑101 (MQ=255)
                                                              ttcGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAGGtttt                                   <  1:6842065/101‑1 (MQ=255)
                                                               tcGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAGGttttt                                  >  2:6842423/1‑101 (MQ=255)
                                                                 gTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAGGTTTTtca                                >  2:6842426/1‑101 (MQ=255)
                                                                  ttttGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAGGTTTTtcat                               >  2:6842429/1‑101 (MQ=255)
                                                                  ttttGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAGGTTTTtcat                               <  2:6842264/101‑1 (MQ=255)
                                                                   tttGTGTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAGGttttt                                  <  1:6842172/97‑1 (MQ=255)
                                                                     tgtgTCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAGGTTTTTCATCAg                            <  2:6842051/101‑1 (MQ=255)
                                                                      gtgtCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAGGTTTTTCATCAGa                           <  1:6842101/101‑1 (MQ=255)
                                                                      gtgtCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAGGTTTTTCATCAGa                           >  1:6842433/1‑101 (MQ=255)
                                                                       tgtCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAGGTTTTTCATCAGAt                          <  2:6841862/101‑1 (MQ=255)
                                                                       tgtCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAGGTTTTTCATCAGAt                          >  2:6842434/1‑101 (MQ=255)
                                                                       tgtCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAGGTTTTTCATCAGAt                          <  1:6841918/101‑1 (MQ=255)
                                                                        gtCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCTCTTCCAGCCATGCCTGTGTCGc                                                          >  1:6842439/1‑68 (MQ=39)
                                                                        gtCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAGGTTTTTCATCAGATa                         >  2:6842438/1‑101 (MQ=255)
                                                                         tCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAGGTTTTTCATCAGATAg                        <  1:6842109/101‑1 (MQ=255)
                                                                         tCAGCAGGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAGGTTTTTCATCAGATAg                        <  1:6841576/101‑1 (MQ=255)
                                                                          cagcagGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAGGTTTTTCATCAg                            <  2:6841964/96‑1 (MQ=255)
                                                                          cagcagGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAGGTTTTTCATCAGATAGc                       >  2:6842441/1‑101 (MQ=255)
                                                                           agcagGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAGGTTTTTCATCAGATAGCg                      <  1:6842007/101‑1 (MQ=255)
                                                                            gcagGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAGGTTTTTCATCAGATAGCGa                     >  2:6842445/1‑101 (MQ=255)
                                                                             cagGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAGGTTTTTCATCAGATAGCGAt                    <  2:6842107/101‑1 (MQ=255)
                                                                              agGCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAGGTTTTTCATCAGATAGCGATa                   >  1:6842448/1‑101 (MQ=255)
                                                                               ggCCTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAGGTTTTTCATCAGATAGCGATAc                  >  2:6842451/1‑101 (MQ=255)
                                                                                  cTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAGGTTTTTCATCAGATAGCGATACGGt               >  1:6842454/1‑101 (MQ=255)
                                                                                  cTTCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAGGTTTTTCATCAGATAGCGATACGGt               >  2:6842455/1‑101 (MQ=255)
                                                                                   ttCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAGGTTTTTCATCAGATAGCGATACGGtt              <  2:6841871/101‑1 (MQ=255)
                                                                                   ttCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAGGTTTTTCATCAGATAGCGATACGGtt              >  1:6842458/1‑101 (MQ=255)
                                                                                    tCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAGGTTTTTCATCAGATAGCGATACGGTTc             <  1:6842021/101‑1 (MQ=255)
                                                                                    tCTGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAGGTTTTTCATCAGATAGCGATACGGTTc             >  2:6842460/1‑101 (MQ=255)
                                                                                      tGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAGGTTTTTCATCAGATAGCGATACGGTTCt            <  2:6841986/100‑1 (MQ=255)
                                                                                      tGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAGGTTTTTCATCAGATAGCGATACGGTTCTg           >  1:6842464/1‑101 (MQ=255)
                                                                                      tGGTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAGGTTTTTCATCAGATAGCGATACGGTTCTg           <  1:6842178/101‑1 (MQ=255)
                                                                                       ggTTTTGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAGGTTTTTCATCAGATAGCGATACGGTTCTGc          >  2:6842466/1‑101 (MQ=255)
                                                                                         ttttGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAGGTTTTTCATCAGATAGCGATACGGTTCTGCgg        <  1:6841877/101‑1 (MQ=255)
                                                                                         ttttGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAGGTTTTTCATCAGATAGCGATACGGTTCTGCgg        >  2:6842470/1‑101 (MQ=255)
                                                                                          tttGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAGGTTTTTCATCAGATAGCGATACGGTTCTGCGGc       >  1:6842473/1‑101 (MQ=255)
                                                                                           ttGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAGGTTTTTCATCAGATAGCGATACGGTTCTGCGGCa      >  2:6842474/1‑101 (MQ=255)
                                                                                            tGGCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAGGTTTTTCATCAGATAGAGATACGGTTCTg           >  2:6842478/1‑95 (MQ=255)
                                                                                              gCAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAGGTTTTTCATCAGATAGCGATACGGTTCTGCGGCACct   >  1:6842480/1‑101 (MQ=255)
                                                                                               cAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAGGTTTTTCATCAGATAGCGATACGGTTCTGCGGCACctt  >  1:6842484/1‑101 (MQ=255)
                                                                                               cAGCTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAGGTTTTTCATCAGATAGCGATACGGTTCTGCGGCACctt  <  1:6842159/101‑1 (MQ=255)
                                                                                                  |                                                                                                 
ATAATACCCATGCCACACGCCTGAAGTGACTGGTAGCAAGCGTAGAGCGGTTCCCACAGTTCTTCGTTTTGTGTCAGCAGGCCTTCTGGTTTTGGCAGTTCTTCGCCTTTCAGGCGCGCTTCCAGCCATGCCTGTGTCGCCATCAGGCGAGAACGCAGGTTTTTCATCAGATAGCGATACGGTTCTGCGGCACCTT  >  NC_000913/4151987‑4152182

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: