| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 273,819 | (C)5→6 | coding (973/1146 nt) | ykfC → | CP4‑6 prophage; PF00078 domain‑containing protein YkfC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 273,814 | 1 | . | C | 99.3% | 1222.8 / 0.2 | 296 | coding (968/1146 nt) | ykfC | CP4‑6 prophage; PF00078 domain‑containing protein YkfC |
| Reads supporting (aligned to +/- strand): ref base . (0/2); new base C (161/133); total (161/135) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.07e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.69e-01 | |||||||||||
Only 100 of 335 total aligned reads displayed.
GTCAAAGGCACCAAAGCACAGGTGGAAGCCATCAGGGAGGAGTGTCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑T‑CCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGTCTCAACGATCCCGC > NC_000913/273714‑273909 | tCAAAGGCACCAAAGCACAGGTGGAAGCCATCAGGGAGGAGTGTCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑T‑c < 1:534730/101‑1 (MQ=255) tCAAAGGCACCAAAGCACAGGTGGAAGCCATCAGGGAGGAGTGTCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑T‑c > 1:534928/1‑101 (MQ=255) cAAAGGCACCAAAGCACAGGTGGAAGCCATCAGGGAGGAGTGTCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATATGACTAAAA‑T‑cc < 1:534413/101‑1 (MQ=255) cAAAGGCACCAAAGCACAGGTGGAAGCCATCAGGGAGGAGTGTCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑T‑cc > 1:534931/1‑101 (MQ=255) ggCACCAAAGCACAGGTGGAAGCCATCAGGGAGGAGTGTCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑T‑cccccc > 2:534939/1‑100 (MQ=255) ggCACCAAAGCACAGGTGGAAGCCATCAGGGAGGAGTGTCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑T‑cccccc > 1:534937/1‑100 (MQ=255) gCACCAAAGCACAGGTGGAAGCCATCAGGGAGGAGTGTCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑T‑cccccca < 2:534236/101‑3 (MQ=255) cACCAAAGCACAGGTGGAAGCCATCAGGGAGGAGTGTCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑T‑ccccccat > 2:534944/1‑98 (MQ=255) aCCAAAGCACAGGTGGAAGCCATCAGGGAGGAGTGTCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑T‑ccccccatg < 1:534449/101‑5 (MQ=255) aCCAAAGCACAGGTGGAAGCCATCAGGGAGGAGTGTCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑T‑ccccccatg > 1:534946/1‑97 (MQ=255) cAAAGCACAGGTGGAAGCCATCAGGGAGGAGTGTCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑T‑c < 2:534437/91‑1 (MQ=255) aaaGCACAGGTGGAAGCCATCAGGGAGGAGTGTCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTa > 1:534949/1‑101 (MQ=255) aaaGCACAGGTGGAAGCCATCAGGGAGGAGTGTCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTa < 2:534626/101‑1 (MQ=255) aGCACAGGTGGAAGCCATCAGGGAGGAGTGTCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAAt > 2:534953/1‑101 (MQ=255) cacaGGTGGAAGCCATCAGGGAGGAGTGTCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGa < 2:534903/101‑1 (MQ=255) caGGTGGAAGCCATCAGGGAGGAGTGTCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACg > 2:534957/1‑101 (MQ=255) gTGGAAGCCATCAGGGAGGAGTGTCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCt > 1:534960/1‑101 (MQ=255) gTGGAAGCCATCAGGGAGGAGTGTCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCt < 1:534366/101‑1 (MQ=255) tGGAAGCCATCAGGGAGGAGTGTCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCtt > 1:534963/1‑101 (MQ=255) tGGAAGCCATCAGGGAGGAGTGTCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCtt < 1:534175/101‑1 (MQ=255) aaGCCATCAGGGAGGAGTGTCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTAt < 1:534433/101‑1 (MQ=255) aGCCATCAGGGAGGAGTGTCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATc > 2:534969/1‑101 (MQ=255) aGCCATCAGGGAGGAGTGTCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATc > 1:534968/1‑101 (MQ=255) gCCATCAGGGAGGAGTGTCGGGGTGTGCTCGTAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAACC‑CCCCCATGTTAATGACGGCTTTATCt < 1:534316/101‑1 (MQ=255) gCCATCAGGGAGGAGTGTCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCt < 1:534234/101‑1 (MQ=255) gCCATCAGGGAGGAGTGTCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCt < 1:534619/101‑1 (MQ=255) ccATCAGGGAGGAGTGTCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCtt > 2:534972/1‑101 (MQ=255) cATCAGGGAGGAGTGTCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCttt < 2:534525/101‑1 (MQ=255) cATCAGGGAGGAGTGTCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑T‑c < 2:534647/73‑1 (MQ=255) aTCAGGGAGGAGTGTCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCtt < 1:534553/99‑1 (MQ=255) tCAGGGAGGAGTGTCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCt < 1:534530/101‑1 (MQ=255) tCAGGGAGGAGTGTCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCt < 1:534327/101‑1 (MQ=255) cAGGGAGGAGTGTCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTg > 1:534976/1‑101 (MQ=255) aGGGAGGAGTGTCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTgg < 2:534395/101‑1 (MQ=255) aGGGAGGAGTGTCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTgg < 2:534480/101‑1 (MQ=255) gggAGGAGTGTCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTggg > 2:534980/1‑101 (MQ=255) aggagTGTCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGca < 1:534390/101‑1 (MQ=255) gagTGTCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGcaca < 1:534459/101‑1 (MQ=255) gagTGTCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGcaca < 1:534475/101‑1 (MQ=255) gagTGTCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGcaca < 2:534719/101‑1 (MQ=255) agTGTCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAg > 1:534983/1‑101 (MQ=255) gtCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCt > 2:534986/1‑101 (MQ=255) tCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTc < 1:534295/101‑1 (MQ=255) ggggTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCAt > 2:534990/1‑101 (MQ=255) ggTGTGCTCGAAGGCGGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTc < 2:534513/101‑1 (MQ=255) gtgtGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCg < 2:534831/101‑1 (MQ=255) gtgtGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCg < 1:534501/101‑1 (MQ=255) gtgCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCa > 1:534993/1‑101 (MQ=255) tgCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCaa > 2:534996/1‑101 (MQ=255) tCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACg > 1:535002/1‑101 (MQ=255) cGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGc < 2:534602/101‑1 (MQ=255) cGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGc < 1:534487/101‑1 (MQ=255) gAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCa > 2:535005/1‑101 (MQ=255) gAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCa < 2:534687/101‑1 (MQ=255) gAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCa > 1:535008/1‑101 (MQ=255) aaGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAg > 1:535012/1‑101 (MQ=255) aGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGt > 2:535013/1‑101 (MQ=255) ggCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTc < 2:534418/101‑1 (MQ=255) ggCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTc < 1:534341/101‑1 (MQ=255) aGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGtt > 2:535019/1‑101 (MQ=255) aGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGtt > 1:535018/1‑101 (MQ=255) tCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTAt > 1:535023/1‑101 (MQ=255) tGAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATgg < 1:534660/101‑1 (MQ=255) gAAACTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGc > 1:535028/1‑101 (MQ=255) aaaCTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCg > 2:535032/1‑101 (MQ=255) aaCTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCga > 2:535037/1‑101 (MQ=255) aaCTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCga > 1:535033/1‑101 (MQ=255) aCTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGagag > 2:535042/1‑101 (MQ=255) aCTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCgag < 2:534349/101‑1 (MQ=255) aCTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCgag > 1:535041/1‑101 (MQ=255) cTCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCgaga < 1:534699/101‑1 (MQ=255) tCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGAt < 2:534570/101‑1 (MQ=255) tCAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGAt < 2:534639/101‑1 (MQ=255) cAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATg < 2:534496/101‑1 (MQ=255) cAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATg > 2:535049/1‑101 (MQ=255) cAGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATg > 1:535050/1‑101 (MQ=255) aGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGc > 2:535055/1‑101 (MQ=255) aGGCTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGc > 1:535056/1‑101 (MQ=255) cTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAg > 2:535063/1‑101 (MQ=255) cTGAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAg > 1:535061/1‑101 (MQ=255) gAACATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAg > 2:535068/1‑99 (MQ=255) aCATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGt > 2:535073/1‑101 (MQ=255) aCATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGt > 1:535072/1‑101 (MQ=255) cATGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGtc > 1:535077/1‑101 (MQ=255) aTGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGtct > 2:535080/1‑101 (MQ=255) tGGATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGtctc > 1:535085/1‑101 (MQ=255) gATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGTCTCaa < 1:534584/101‑1 (MQ=255) gATAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGTCTCaa > 2:535088/1‑101 (MQ=255) aTAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGTCTCAAc > 1:535090/1‑101 (MQ=255) aTAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGTCTCAAc < 1:534605/101‑1 (MQ=255) aTAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGTCTCAAc < 1:534547/101‑1 (MQ=255) aTAAGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGTCTCAAc < 1:534523/101‑1 (MQ=255) aaGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGTCTCAACGa > 2:535094/1‑101 (MQ=255) aGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGTCTCAACGAt > 1:535097/1‑101 (MQ=255) aGACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGTCTCAACGAt < 1:534560/101‑1 (MQ=255) gACTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGTCTCAACGATc < 1:534800/101‑1 (MQ=255) aCTAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGTCTCAACGATcc > 1:535102/1‑101 (MQ=255) tAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGTCTCAACGATCCCg < 2:534541/101‑1 (MQ=255) tAAAA‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGTCTCAACGATCCCg > 1:535106/1‑101 (MQ=255) aaaa‑TCCCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGTCTCAACGATCCCGc > 1:535109/1‑101 (MQ=255) | GTCAAAGGCACCAAAGCACAGGTGGAAGCCATCAGGGAGGAGTGTCGGGGTGTGCTCGAAGGCAGTCTGAAACTCAGGCTGAACATGGATAAGACTAAAA‑T‑CCCCCATGTTAATGACGGCTTTATCTTTCTGGGGCACAGGCTCATTCGCAAACGCAGTCGTTATGGCGAGATGCGAGTGGTCTCAACGATCCCGC > NC_000913/273714‑273909 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |