BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,138,175	(G)_5→6	coding (805/942 nt)	flgJ →	putative peptidoglycan hydrolase FlgJ

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,138,170	1	.	G	100.0%	1154.5 / NA	274	Q267R (CAG→CGG)	flgJ	putative peptidoglycan hydrolase FlgJ
Reads supporting (aligned to +/- strand): ref base . (0/0); new base G (146/128); total (146/128)

Only 100 of 313 total aligned reads displayed.

CGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACA‑GGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCG  >  NC_000913/1138070‑1138265

cgcgTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACa                                                                                                  >  2:2199142/1‑101 (MQ=255)

cgcgTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACa                                                                                                  >  1:2199141/1‑101 (MQ=255)

 gcgTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACA‑g                                                                                                >  1:2199146/1‑101 (MQ=255)

  cgTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACA‑gg                                                                                               <  2:2198707/101‑1 (MQ=255)

   gTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACA‑ggg                                                                                              >  1:2199152/1‑101 (MQ=255)

      tACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACA‑gggggg                                                                                           >  2:2199155/1‑100 (MQ=255)

      tACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACA‑gggggg                                                                                           <  2:2198431/101‑2 (MQ=255)

       aCAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACA‑ggggggc                                                                                          >  1:2199157/1‑99 (MQ=255)

        cAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACA‑ggggggcg                                                                                         <  1:2198843/101‑4 (MQ=255)

         aGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACA‑ggggggcgc                                                                                        >  2:2199160/1‑97 (MQ=255)

           cTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAg                                                                                       >  1:2199165/1‑101 (MQ=255)

            tCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAgg                                                                                      >  2:2199166/1‑101 (MQ=255)

             cGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGc                                                                                     >  2:2199171/1‑101 (MQ=255)

              gTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGcc                                                                                    >  1:2199173/1‑101 (MQ=255)

               tATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGccc                                                                                   <  1:2198523/101‑1 (MQ=255)

               tATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACA‑gg                                                                                               >  2:2199176/1‑88 (MQ=255)

                aTCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCt                                                                                  <  2:2198678/101‑1 (MQ=255)

                aTCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCt                                                                                  >  2:2199179/1‑101 (MQ=255)

                 tCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTa                                                                                 <  2:2198317/101‑1 (MQ=255)

                  cTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTAc                                                                                >  1:2199185/1‑101 (MQ=255)

                  cTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTAc                                                                                >  2:2199183/1‑101 (MQ=255)

                   tGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACa                                                                               >  1:2199190/1‑101 (MQ=255)

                     gAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAgg                                                                             >  1:2199193/1‑101 (MQ=255)

                       aGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGAc                                                                           >  2:2199195/1‑101 (MQ=255)

                        gCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGAcg                                                                          >  1:2199197/1‑101 (MQ=255)

                         ccTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGAcgc                                                                         >  1:2199201/1‑101 (MQ=255)

                          cTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGAcgcg                                                                        >  1:2199205/1‑101 (MQ=255)

                            tGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCggg                                                                      <  1:2198687/101‑1 (MQ=255)

                               cGGATTACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTa                                                                   <  1:2198902/101‑1 (MQ=255)

                               cGGATTACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTa                                                                   >  1:2199212/1‑101 (MQ=255)

                               cGGATTACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTa                                                                   >  2:2199210/1‑101 (MQ=255)

                               cGGATTACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTa                                                                   <  2:2198656/101‑1 (MQ=255)

                                  aTTACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGc                                                                >  2:2199218/1‑101 (MQ=255)

                                  aTTACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGc                                                                >  1:2199217/1‑101 (MQ=255)

                                   ttACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGcc                                                               <  1:2198423/101‑1 (MQ=255)

                                    tACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCa                                                              >  2:2199222/1‑101 (MQ=255)

                                     aCGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCAc                                                             <  1:2198196/101‑1 (MQ=255)

                                       gTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCg                                                           >  1:2199228/1‑101 (MQ=255)

                                       gTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCg                                                           >  2:2199227/1‑101 (MQ=255)

                                            gCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCt                                                      <  1:2198722/101‑1 (MQ=255)

                                             cTGTTAACGCGTACCCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGACTATGCCACCGATCCTc                                                     <  2:2198527/101‑1 (MQ=255)

                                             cTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTc                                                     >  2:2199232/1‑101 (MQ=255)

                                                 tAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTa                                                 <  1:2198565/101‑1 (MQ=255)

                                                  aaCGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTAt                                                >  1:2199236/1‑101 (MQ=255)

                                                  aaCGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTAt                                                <  1:2198621/101‑1 (MQ=255)

                                                   aCGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATg                                               >  2:2199238/1‑101 (MQ=255)

                                                   aCGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATg                                               <  1:2198880/101‑1 (MQ=255)

                                                     gcgTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGcc                                             >  1:2199241/1‑101 (MQ=255)

                                                      cgTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTAt                                                                  >  2:2199244/1‑79 (MQ=255)

                                                      cgTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGccc                                            <  1:2198361/101‑1 (MQ=255)

                                                       gTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCg                                           >  1:2199246/1‑101 (MQ=255)

                                                        taccccGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGccc                                                                                   <  2:2198810/57‑1 (MQ=255)

                                                        tAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGc                                          <  1:2198546/101‑1 (MQ=255)

                                                         aaCCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCa                                         <  1:2198740/101‑1 (MQ=255)

                                                          aCCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCaa                                        >  2:2199250/1‑101 (MQ=255)

                                                           cccGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCaaa                                       >  1:2199252/1‑101 (MQ=255)

                                                              gcgcTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAg                                                                              <  1:2198627/59‑1 (MQ=255)

                                                                 cTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCAcc                                 >  1:2199258/1‑101 (MQ=255)

                                                                  tACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCa                                >  1:2199263/1‑101 (MQ=255)

                                                                  tACGCCGCCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCa                                >  2:2199259/1‑101 (MQ=255)

                                                                    cgccgcCGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGa                                                                            <  2:2198647/55‑1 (MQ=255)

                                                                    cgccgcCGTGACGACCGCCGCGAGTGCGGAACA‑ggg                                                                                              <  2:2198496/36‑1 (MQ=255)

                                                                     gccgccGTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACa                             >  1:2199267/1‑101 (MQ=255)

                                                                      ccgccgTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCt                                                      <  2:2198257/75‑1 (MQ=255)

                                                                      ccgccgTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCa                                   <  2:2198746/94‑1 (MQ=255)

                                                                      ccgccgTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACa                             <  2:2198594/100‑1 (MQ=255)

                                                                      ccgccgTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACAt                            <  2:2198574/101‑1 (MQ=255)

                                                                      ccgccgTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACAt                            <  1:2198464/101‑1 (MQ=255)

                                                                       cgccgTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATg                           >  2:2199270/1‑101 (MQ=255)

                                                                       cgccgTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATg                           <  1:2198753/101‑1 (MQ=255)

                                                                       cgccgTGACGACCGCCGCGAGTGCGGAACAGGGGGGAGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCAc                                  <  1:2198636/94‑1 (MQ=255)

                                                                         ccgTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGAt                         <  2:2198670/101‑1 (MQ=255)

                                                                         ccgTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGAt                         >  1:2199275/1‑101 (MQ=255)

                                                                          cgTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACATGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGAtt                        >  2:2199277/1‑101 (MQ=255)

                                                                           gTGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAgg                                                                             <  2:2198563/47‑1 (MQ=255)

                                                                            tGACGACCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTca                      <  1:2198798/101‑1 (MQ=255)

                                                                             gacgacCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTca                      >  1:2199280/1‑100 (MQ=255)

                                                                              acgacCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTcagc                    <  1:2198663/101‑1 (MQ=255)

                                                                                gacCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTcagcag                  >  1:2199285/1‑101 (MQ=255)

                                                                                gacCGCCGCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTcagcag                  >  2:2199283/1‑101 (MQ=255)

                                                                                  ccgccgCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGAt                >  1:2199289/1‑101 (MQ=255)

                                                                                  ccgccgCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGAt                <  2:2198718/101‑1 (MQ=255)

                                                                                  ccgccgCGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGAt                <  1:2198383/101‑1 (MQ=255)

                                                                                   cgccgcGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCt                                                      <  2:2198640/62‑1 (MQ=255)

                                                                                    gccgcGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGa              >  2:2199292/1‑101 (MQ=255)

                                                                                    gccgcGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGa              <  1:2198597/101‑1 (MQ=255)

                                                                                     ccgcGAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGaa             >  1:2199295/1‑101 (MQ=255)

                                                                                      cgcgAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGaaa            >  1:2199299/1‑101 (MQ=255)

                                                                                       gcgAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGAc                                                                           >  1:2199302/1‑37 (MQ=38)

                                                                                        cgAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATc          >  2:2199303/1‑101 (MQ=255)

                                                                                         gAGTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATg                                               <  1:2198691/63‑1 (MQ=255)

                                                                                           gTGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGAt       >  1:2199308/1‑101 (MQ=255)

                                                                                            tGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATa      <  2:2198873/101‑1 (MQ=255)

                                                                                            tGCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATa      <  1:2198860/101‑1 (MQ=255)

                                                                                             gCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATaa     <  1:2198825/101‑1 (MQ=255)

                                                                                             gCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATaa     <  1:2198978/101‑1 (MQ=255)

                                                                                             gCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATaa     <  2:2198622/101‑1 (MQ=255)

                                                                                             gCGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATaa     <  2:2198699/101‑1 (MQ=255)

                                                                                              cGGAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAg    >  2:2199312/1‑101 (MQ=255)

                                                                                                gAACAGGGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCg  <  2:2198962/101‑1 (MQ=255)

CGCGTCTACAGCTCGTATCTGGAAGCCTTGTCGGATTACGTTGGGCTGTTAACGCGTAACCCGCGCTACGCCGCCGTGACGACCGCCGCGAGTGCGGAACA‑GGGGGCGCAGGCCCTACAGGACGCGGGCTATGCCACCGATCCTCACTATGCCCGCAAACTCACCAACATGATTCAGCAGATGAAATCGATAAGCG  >  NC_000913/1138070‑1138265

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`