New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4556760139 (0.400)287 (0.780)
+TTT
127/172 1.5 66.1% coding (107/144 nt) ytiD protein YtiD
?NC_000913 4556761 = 151 (0.400)coding (108/144 nt) ytiD protein YtiD

Only 100 of 479 total aligned reads displayed.

TTATGCGGAAATAAATAATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGA  >  NC_000913/4556662‑4556861
                                                                                                    |                                                                                                    
atgcggaaataaataatttcccaccggaattaagtagcagcggtgacaagtattttcatctacgtaactattcggaatattcagaatatactagcggtttt                                                                                                      <  2:8857169‑M2/1‑1 (MQ=255)
atgcggaaataaataatttcccaccggaattaagtagcagcggtgacaagtattttcatctacgtaactattcggaatattcagaatatactagcggtttt                                                                                                      <  1:8857314‑M2/1‑1 (MQ=255)
 tgcggaaataaataatttcccaccggaattaagtagcagcggtgacaagtattttcatctacgtaactattcggaatattcagaatatactagcggttttt                                                                                                     <  2:8857615‑M2/2‑1 (MQ=255)
 tgcggaaataaataatttcccaccggaattaagtagcagcggtgacaagtattttcatctacgtaactattcggaatattcagaatatactagcggttttt                                                                                                     >  1:8857965‑M2/100‑101 (MQ=255)
   cggaaataaataatttcccaccggaattaagtagcagcggtgacaagtattttcatctacgtaactattcggaatattcagaatatactagcggttttttt                                                                                                   >  2:8857967‑M2/98‑101 (MQ=255)
   cggaaataaataatttcccaccggaattaagtagcagcggtgacaagtattttcatctacgtaactattcggaatattcagaatatactagcggttttttt                                                                                                   <  1:8857108‑M2/4‑1 (MQ=255)
     gaaataaataatttcccaccggaattaagtagcagcggtgacaagtattttcatctacgtaactattcggaatattcagaatatactagcggttttttttt                                                                                                 <  2:8856913‑M2/6‑1 (MQ=255)
     gaaataaataatttcccaccggaattaagtagcagcggtgacaagtattttcatctacgtaactattcggaatattcagaatatactagcggttttttttt                                                                                                 <  2:8857343‑M2/6‑1 (MQ=255)
       aataaataatttcccaccggaattaagtagcagcggtgacaagtattttcatctacgtaactattcggaatattcagaatatactagcggttttttttttt                                                                                               <  2:8857417‑M2/8‑1 (MQ=255)
        ataaataatttcccaccggaattaagtagcagcggtgacaagtattttcatctacgtaactattcggaatattcagaatatactagcggtttttttttttg                                                                                              <  1:8857072‑M2/9‑2 (MQ=255)
        ataaataatttcccaccggaattaagtagcagcggtgacaagtattttcatctacgtaactattcggaatattcagaatatactagcggtttttttttttg                                                                                              >  1:8857977‑M2/93‑100 (MQ=255)
        ataaataatttcccaccggaattaagtagcagcggtgacaagtattttcatctacgtaactattcggaatattcagaatatactagcggtttttttttt                                                                                                >  2:8857976‑M2/93‑99 (MQ=255)
          aaataatttcccaccggaattaagtagcagcggtgacaagtattttcatctacgtaactattcggaatattcagaatatactagcggtttttttttttgag                                                                                            <  1:8857245‑M2/11‑4 (MQ=255)
          aaataatttcccaccggaattaagtagcagcggtgacaagtattttcatctacgtaactattcggaatattcagaatatactagcggttttttttttgagt                                                                                            <  2:8857315‑M2/11‑5 (MQ=255)
             taatttcccaccggaattaagtagcagcggtgacaagtattttcatctacgtaactattcggaatattcagaatatactagcggtttttttttt                                                                                                >  2:8857985‑M2/88‑94 (MQ=255)
               aatttcccaccggaattaagtagcagcggtgacaagtattttcatctacgtaactattcggaatattcagaatatactagcggttTTTTTTTTTGAGTTtg                                                                                       >  1:8857987‑M2/86‑101 (MQ=255)
                 atTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTTTGAGTTtgat                                                                                     <  2:8857018/101‑1 (MQ=255)
                  tttCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTTTGAGTTtgatg                                                                                    >  2:8857993/1‑101 (MQ=255)
                       cACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTTTGAGTTTGATGAtttt                                                                               >  1:8857998/1‑101 (MQ=255)
                       accggaattaagtagcagcggtgacaagtattttcatctacgtaactattcggaatattcagaatatactagcggttTTTTTTTTTGAGTTTGATGAtttt                                                                               <  1:8857411‑M2/24‑1 (MQ=255)
                          ggaattaagtagcagcggtgacaagtattttcatctacgtaactattcggaatattcagaatatactagcggttTTTTTTTTTGAGTTTGATGATTTTTAt                                                                            <  1:8857124‑M2/27‑1 (MQ=255)
                          cGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTTTGAGTTtg                                                                                       >  2:8858004/1‑90 (MQ=255)
                           ggAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTTTGAGTTtgatga                                                                                   <  1:8857193/93‑1 (MQ=255)
                             ttaagtagcagcggtgacaagtattttcatctacgtaactattcggaatattcagaatatactagcggttttttttttt                                                                                               >  1:8858022‑M2/72‑79 (MQ=255)
                             ttaagtagcagcggtgacaagtattttcatctacgtaactattcggaatattcagaatatactagcggttttttttttt                                                                                               >  2:8858023‑M2/72‑79 (MQ=255)
                             attaagtagcagcggtgacaagtattttcatctacgtaactattcggaatattcagaatatactagcggttTTTTTTTTTGAGTTTGATGATTTTTATCaa                                                                         <  1:8856514‑M2/30‑1 (MQ=255)
                             attaagtagcagcggtgacaagtattttcatctacgtaactattcggaatattcagaatatactagcggttTTTTTTTTTGAGTTTGATGATTTTTATCaa                                                                         >  2:8858015‑M2/72‑101 (MQ=255)
                             attaagtagcagcggtgacaagtattttcatctacgtaactattcggaatattcagaatatactagcggttTTTTTTTTTGAGTTTGATGATTTTTATCaa                                                                         <  1:8857033‑M2/30‑1 (MQ=255)
                             attaagtagcagcggtgacaagtattttcatctacgtaactattcggaatattcagaatatactagcggttTTTTTTTTTGAGTTTGATGATTTTTATCaa                                                                         <  1:8856959‑M2/30‑1 (MQ=255)
                             aaTTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTTTGAGTTTGATGATTTTTATCaa                                                                         >  1:8858012/1‑101 (MQ=255)
                               taagtagcagcggtgacaagtattttcatctacgtaactattcggaatattcagaatatactagcggttTTTTTTTTTGAGTTTGATGATTTTTATCAAAt                                                                       <  1:8857326‑M2/32‑1 (MQ=255)
                                aagtagcagcggtgacaagtattttcatctacgtaactattcggaatattcagaatatactagcggttTTTTTTTTTGAGTTTtatgat                                                                                  >  1:8858030‑M2/69‑89 (MQ=255)
                                   tagcagcggtgacaagtattttcatctacgtaactattcggaatattcagaatatactagcggttTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATg                                                                   <  2:8857283‑M2/36‑1 (MQ=255)
                                     gcagcggtgacaagtattttcatctacgtaactattcggaatattcagaatatactagcggttTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGAc                                                                 <  2:8857547‑M2/38‑1 (MQ=255)
                                     gcagcggtgacaagtattttcatctacgtaactattcggaatattcagaatatactagcggttTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGAc                                                                 >  1:8858037‑M2/64‑101 (MQ=255)
                                     agcagcGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGAc                                                                 >  2:8858034/1‑101 (MQ=255)
                                      cagcggtgacaagtattttcatctacgtaactattcggaatattcagaatatactagcggttTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACt                                                                <  1:8857304‑M2/39‑1 (MQ=255)
                                      cagcggtgacaagtattttcatctacgtaactattcggaatattcagaatatactagcggttTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACt                                                                <  1:8857684‑M2/39‑1 (MQ=255)
                                         ggtgacaagtattttcatctacgtaactattcggaatattcagaatatactagcggtttTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACtt                                                               <  1:8856877‑M2/40‑1 (MQ=255)
                                         gcGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACtttt                                                             <  2:8857569/101‑1 (MQ=255)
                                         cggtgacaagtattttcatctacgtaactattcggaatattcagaatatactagcggttTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACtttt                                                             <  2:8857472‑M2/42‑1 (MQ=255)
                                          ggtgacaagtattttcatctacgtaactattcggaatattcagaatatactagcggttTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACttttt                                                            <  1:8857371‑M2/43‑1 (MQ=255)
                                          cGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACttttt                                                            >  2:8858042/1‑101 (MQ=255)
                                           tgacaagtattttcatctacgtaactattcggaatattcagaatatactagcggttttttttttgag                                                                                             >  1:8858049‑M2/58‑64 (MQ=255)
                                           tgacaagtattttcatctacgtaactattcggaatattcagaatatactagcggtttttttttt                                                                                                >  2:8858051‑M2/58‑64 (MQ=255)
                                           gtgacaagtattttcatctacgtaactattcggaatattcagaatatactagcggttTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACtttttt                                                           <  2:8857050‑M2/44‑1 (MQ=255)
                                               aCAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTg                                                       <  1:8857779/101‑1 (MQ=255)
                                                aagtattttcatctacgtaactattcggaatattcagaatatactagcggttTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGa                                                      >  2:8858057‑M2/53‑101 (MQ=255)
                                                   gTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGaaaa                                                   <  2:8857077/101‑1 (MQ=255)
                                                    tATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAg                                                  <  2:8857195/101‑1 (MQ=255)
                                                    attttcatctacgtaactattcggaatattcagaatatactagcggttTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGaaaa                                                   >  2:8858066‑M2/49‑100 (MQ=255)
                                                     ttttcatctacgtaactattcggaatattcagaatatactagcggttTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGt                                                 <  1:8857354‑M2/54‑1 (MQ=255)
                                                     aTTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGt                                                 >  1:8858065/1‑101 (MQ=255)
                                                      ttttCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTc                                                <  1:8857513/101‑1 (MQ=255)
                                                          cATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTa                                            >  2:8858074/1‑101 (MQ=255)
                                                          cATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTa                                            >  1:8858073/1‑101 (MQ=255)
                                                          atctacgtaactattcggaatattcagaatatactagcggttTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTa                                            <  2:8857233‑M2/59‑1 (MQ=255)
                                                            tCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGa                                          <  2:8857436/101‑1 (MQ=255)
                                                            ctacgtaactattcggaatattcagaatatactagcggttTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAg                                                  >  1:8858082‑M2/41‑93 (MQ=255)
                                                             tacgtaactattcggaatattcagaatatactagcggttTTTTTTTTTGAGTTTGATGCtt                                                                                 >  1:8858087‑M2/40‑61 (MQ=255)
                                                              tACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGata                                        <  2:8857697/101‑1 (MQ=255)
                                                               gtaactattcggaatattcagaatatactagcggtttTTTTTTTTTGAg                                                                                           >  2:8858094‑M2/38‑49 (MQ=255)
                                                                  tAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCa                                    <  1:8857597/101‑1 (MQ=255)
                                                                  actattcggaatattcagaatatactagcggtttttttttttga                                                                                             >  2:8858103‑M2/35‑42 (MQ=255)
                                                                  aactattcggaatattcagaatatactagcggttTTTTTTTTTGAGTTtgatg                                                                                    >  1:8858100‑M2/35‑53 (MQ=255)
                                                                  aactattcggaatattcagaatatactagcggttTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCa                                    <  1:8857425‑M2/67‑1 (MQ=255)
                                                                    ctattcggaatattcagaatatactagcggttTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATa                                  <  1:8857553‑M2/69‑1 (MQ=255)
                                                                     tattcggaatattcagaatatactagcggttTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAg                                 <  2:8857863‑M2/70‑1 (MQ=255)
                                                                      attcggaatattcagaatatactagcggttTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAgg                                >  2:8858113‑M2/31‑101 (MQ=255)
                                                                       aTTCGGAATATTCAGAATATACTAGCGGTTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGc                               >  1:8858112/1‑101 (MQ=255)
                                                                         tCGGAATATTCAGAATATACTAGCGGTTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAg                                 <  2:8856978/97‑1 (MQ=255)
                                                                         tCGGAATATTCAGAATATACTAGCGGTTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCaa                             <  1:8857210/101‑1 (MQ=255)
                                                                          ggaatattcagaatatactagcggttTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAg                            >  1:8858122‑M2/27‑101 (MQ=255)
                                                                          ggaatattcagaatatactagcggttTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAg                            >  2:8858121‑M2/27‑101 (MQ=255)
                                                                           gaatattcagaatatactagcggttTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGTCTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGt                           <  1:8857167‑M2/76‑1 (MQ=255)
                                                                           gaatattcagaatatactagcggttTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGt                           <  2:8857138‑M2/76‑1 (MQ=255)
                                                                            aatattcagaatatactagcggttTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTa                          <  2:8857510‑M2/77‑1 (MQ=255)
                                                                             atattcagaatatactagcggttTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTaa                         <  1:8857622‑M2/78‑1 (MQ=255)
                                                                              atatTCAGAATATACTAGCGGTTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAg                        <  2:8857456/101‑1 (MQ=255)
                                                                              atatTCAGAATATACTAGCGGTTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAg                        >  2:8858129/1‑101 (MQ=255)
                                                                               attcagaatatactagcggttTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAgg                       <  1:8857489‑M2/80‑1 (MQ=255)
                                                                                ttcagaatatactagcggttTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGt                      >  1:8858135‑M2/21‑101 (MQ=255)
                                                                                   cAGAATATACTAGCGGTTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGtttt                   >  2:8858138/1‑101 (MQ=255)
                                                                                     aatatactagcggttTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGtttt                   <  1:8857480‑M2/84‑1 (MQ=255)
                                                                                     aatatactagcggttTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTtat                 <  2:8857390‑M2/86‑1 (MQ=255)
                                                                                      atatactagcggttTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTtata                >  1:8858145‑M2/15‑101 (MQ=255)
                                                                                       tatactagcggttTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATAc               <  1:8857394‑M2/88‑1 (MQ=255)
                                                                                         ttctagcggttTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGt                                                 <  1:8857468‑M2/54‑1 (MQ=255)
                                                                                         tactagcggttTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTa                                            >  2:8858151‑M2/12‑70 (MQ=255)
                                                                                          taCTAGCGGTTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACttt            <  1:8857274/101‑1 (MQ=255)
                                                                                          actagcggttTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACttt            <  2:8857360‑M2/91‑1 (MQ=255)
                                                                                           aCTAGCGGTTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATAtt                                      <  1:8857531/74‑1 (MQ=255)
                                                                                            tagcggttTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGc          <  2:8857262‑M2/93‑1 (MQ=255)
                                                                                            cTAGCGGTTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGc          <  1:8857447/101‑1 (MQ=255)
                                                                                               cggttTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGa       <  2:8857656‑M2/96‑1 (MQ=255)
                                                                                                ggttTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTa                          <  2:8857406‑M2/77‑1 (MQ=255)
                                                                                                ggttTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGAc      >  1:8858162‑M2/5‑101 (MQ=255)
                                                                                                 gttTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACa     <  1:8857341‑M2/98‑1 (MQ=255)
                                                                                                   tTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAgg   >  2:8858159‑M2/2‑101 (MQ=255)
                                                                                                    tttttttttGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGa  <  1:8857719/101‑1 (MQ=255)
                                                                                                    |                                                                                                    
TTATGCGGAAATAAATAATTTCCCACCGGAATTAAGTAGCAGCGGTGACAAGTATTTTCATCTACGTAACTATTCGGAATATTCAGAATATACTAGCGGTTTTTTTTTGAGTTTGATGATTTTTATCAAATCATGACTTTTTTCCTGAAAAGTCAGTAGATATTCATAGGCAAGTAAGGTTTTATACTTTGCTGACAGGA  >  NC_000913/4556662‑4556861

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.