BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,604,150	T→C	L35S (TTG→TCG)	lsrD →	Autoinducer‑2 ABC transporter membrane subunit LsrD

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,604,150	0	T	C	100.0%	1434.8 / NA	341	L35S (TTG→TCG)	lsrD	Autoinducer‑2 ABC transporter membrane subunit LsrD
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (184/157); total (184/157)

Only 100 of 341 total aligned reads displayed.

TATTCGCTACGGTTGGGAACTGGCTCTTGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTTGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCG  >  NC_000913/1604052‑1604247

  ttCGCTACGGTTGGGAACTGGCTCTTGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTg                                                                                               <  1:3083550/101‑1 (MQ=255)

   tCGCTACGGTTGGGAACTGGCTCTTGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGt                                                                                              >  1:3084015/1‑101 (MQ=255)

   tCGCTACGGTTGGGAACTGGCTCTTGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGt                                                                                              <  2:3083714/101‑1 (MQ=255)

    cGCTACGGTTGGGAACTGGCTCTTGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGtt                                                                                             <  2:3083649/101‑1 (MQ=255)

      cTACGGTTGGGAACTGGCTCTTGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCa                                                                                           <  1:3083511/101‑1 (MQ=255)

      cTACGGTTGGGAACTGGCTCTTGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCa                                                                                           <  2:3083861/101‑1 (MQ=255)

       tACGGTTGGGAACTGGCTCTTGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAg                                                                                          <  1:3083472/101‑1 (MQ=255)

       tACGGTTGGGAACTGGCTCTTGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAg                                                                                          >  2:3084017/1‑101 (MQ=255)

         cGGTTGGGAACTGGCTCTTGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCa                                                                                        >  2:3084020/1‑101 (MQ=255)

          ggTTGGGAACTGGCTCTTGCCGCACTGCTCGTTATTGAGGTTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCAc                                                                                       >  2:3084025/1‑101 (MQ=255)

                gAACTGGCTCTTGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGa                                                                                 >  2:3084028/1‑101 (MQ=255)

                gAACTGGCTCTTGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGa                                                                                 <  1:3083698/101‑1 (MQ=255)

                gAACTGGCTCTTGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGa                                                                                 >  1:3084030/1‑101 (MQ=255)

                 aaCTGGCTCTTGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGAc                                                                                >  1:3084034/1‑101 (MQ=255)

                   cTGGCTCTTGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACtt                                                                              <  2:3083417/101‑1 (MQ=255)

                    tGGCTCTTGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACttt                                                                             <  1:3083628/101‑1 (MQ=255)

                      gCTCTTGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTAt                                                                           <  2:3083728/101‑1 (MQ=255)

                       ctctTGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATc                                                                          <  1:3083735/101‑1 (MQ=255)

                        tctTGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCt                                                                         >  1:3084041/1‑101 (MQ=255)

                        tctTGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCt                                                                         >  2:3084042/1‑101 (MQ=255)

                         ctTGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTg                                                                        <  1:3083535/101‑1 (MQ=255)

                          ttGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTgc                                                                       <  2:3083283/101‑1 (MQ=255)

                          ttGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTgc                                                                       >  1:3084046/1‑101 (MQ=255)

                          ttGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTgc                                                                       <  1:3083788/101‑1 (MQ=255)

                          ttGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTgc                                                                       <  2:3083477/101‑1 (MQ=255)

                            gCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTgcat                                                                     <  1:3083539/101‑1 (MQ=255)

                             ccGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTgcatt                                                                    <  2:3083564/101‑1 (MQ=255)

                              cGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTAt                                                                           <  1:3083683/93‑1 (MQ=255)

                               gCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTgcattgg                                                                  >  1:3084052/1‑101 (MQ=255)

                                cACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTgcattggc                                                                 <  2:3083209/101‑1 (MQ=255)

                                cACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTgcattggc                                                                 >  1:3084055/1‑101 (MQ=255)

                                cACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTgcattggc                                                                 <  1:3083641/101‑1 (MQ=255)

                                cACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTgcattggc                                                                 >  2:3084056/1‑101 (MQ=255)

                                  cTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTgcattggcat                                                               >  1:3084060/1‑101 (MQ=255)

                                   tGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTgcattggcatt                                                              <  2:3083372/101‑1 (MQ=255)

                                    gCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTgcattggcattg                                                             >  2:3084062/1‑101 (MQ=255)

                                    gCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTgcattggcattg                                                             <  1:3083413/101‑1 (MQ=255)

                                      tCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTgcattg                                                                   <  1:3083454/93‑1 (MQ=255)

                                      tCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTc                                                           <  1:3083830/101‑1 (MQ=255)

                                       cGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCg                                                          >  2:3084068/1‑101 (MQ=255)

                                          tATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGccc                                                       >  1:3084073/1‑101 (MQ=255)

                                           aTTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCt                                                      >  2:3084074/1‑101 (MQ=255)

                                             tGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTAc                                                    >  1:3084077/1‑101 (MQ=255)

                                               agaTTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCg                                                  >  1:3084084/1‑101 (MQ=255)

                                               agaTTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCg                                                  >  2:3084085/1‑101 (MQ=255)

                                                 aTTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCt                                                >  2:3084089/1‑101 (MQ=255)

                                                  ttGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTa                                               >  1:3084091/1‑101 (MQ=255)

                                                   tGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTaa                                              <  1:3083589/101‑1 (MQ=255)

                                                   tGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTaa                                              <  1:3083754/101‑1 (MQ=255)

                                                    gTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAAc                                             <  1:3083292/101‑1 (MQ=255)

                                                    gTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAAc                                             >  2:3084095/1‑101 (MQ=255)

                                                    gTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAAc                                             <  2:3083497/101‑1 (MQ=255)

                                                     tCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACg                                            >  1:3084097/1‑101 (MQ=255)

                                                        cATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATg                                         >  1:3084103/1‑101 (MQ=255)

                                                         aTTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATgg                                        >  1:3084106/1‑101 (MQ=255)

                                                          tttGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGt                                       >  2:3084109/1‑101 (MQ=255)

                                                           ttGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTg                                      >  1:3084112/1‑101 (MQ=255)

                                                             ggTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGAt                                    <  2:3083617/101‑1 (MQ=255)

                                                              gTGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGAtt                                   <  2:3083660/101‑1 (MQ=255)

                                                               tGCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTg                                  <  2:3083611/101‑1 (MQ=255)

                                                                gCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGt                                 >  2:3084116/1‑101 (MQ=255)

                                                                gCAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGt                                 <  2:3083799/101‑1 (MQ=255)

                                                                 cAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTc                                >  1:3084125/1‑101 (MQ=255)

                                                                 cAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTc                                >  2:3084124/1‑101 (MQ=255)

                                                                 cAATTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTc                                >  1:3084120/1‑101 (MQ=255)

                                                                  aaTTAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTACATTGGCATTGGCg                                                          >  1:3084131/1‑74 (MQ=255)

                                                                    ttAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGt                             >  2:3084134/1‑101 (MQ=255)

                                                                    ttAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGt                             <  1:3083782/101‑1 (MQ=255)

                                                                     tAACCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAg                              >  1:3084136/1‑99 (MQ=255)

                                                                      aaCCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTgg                           >  2:3084139/1‑101 (MQ=255)

                                                                       aCCCGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGc                          <  2:3083630/101‑1 (MQ=255)

                                                                        cccGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCg                         <  2:3083521/101‑1 (MQ=255)

                                                                        cccGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCg                         >  1:3084144/1‑101 (MQ=255)

                                                                        cccGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCg                         <  2:3083676/101‑1 (MQ=255)

                                                                         ccGCGAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCgg                        >  2:3084147/1‑101 (MQ=255)

                                                                          cgcgAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCggg                       >  2:3084150/1‑101 (MQ=255)

                                                                           gcgAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCggg                       >  1:3084152/1‑100 (MQ=255)

                                                                           gcgAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGa                      <  2:3083583/101‑1 (MQ=255)

                                                                             gAATGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCggg                       >  2:3084157/1‑98 (MQ=255)

                                                                              aaTGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCgg                        >  1:3084161/1‑96 (MQ=255)

                                                                               aTGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCgg                        >  1:3084165/1‑95 (MQ=255)

                                                                                tGTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCgg                        >  2:3084167/1‑94 (MQ=255)

                                                                                 gTTAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGata                <  2:3083450/101‑1 (MQ=255)

                                                                                  ttAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCggg                       >  2:3084171/1‑93 (MQ=255)

                                                                                  ttAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGatat               <  1:3083716/101‑1 (MQ=255)

                                                                                   tAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCggg                       >  1:3084175/1‑92 (MQ=255)

                                                                                   tAGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCggg                       >  2:3084176/1‑92 (MQ=255)

                                                                                    aGATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATAttt             <  2:3083737/101‑1 (MQ=255)

                                                                                     gATCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTc            <  2:3083685/101‑1 (MQ=255)

                                                                                      aTCTCAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCggg                       >  2:3084181/1‑89 (MQ=255)

                                                                                       tctcAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGt          <  2:3083906/101‑1 (MQ=255)

                                                                                         tcAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCggg                       >  1:3084186/1‑86 (MQ=255)

                                                                                          cAATATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCggg                       >  2:3084188/1‑85 (MQ=255)

                                                                                           aaTATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTgg      <  1:3083600/101‑1 (MQ=255)

                                                                                           aaTATGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTgg      <  2:3083820/101‑1 (MQ=255)

                                                                                            atatGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGGTCGATATTTTGt          >  1:3084191/1‑96 (MQ=255)

                                                                                             tatGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGtt    <  2:3083765/101‑1 (MQ=255)

                                                                                              atGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCggg                       >  2:3084196/1‑81 (MQ=255)

                                                                                              atGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTc   <  1:3083908/101‑1 (MQ=255)

                                                                                               tGTCGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCg  <  1:3083607/101‑1 (MQ=255)

TATTCGCTACGGTTGGGAACTGGCTCTTGCCGCACTGCTCGTTATTGAGATTGTCGCATTTGGTGCAATTAACCCGCGAATGTTAGATCTCAATATGTTGCTGTTCAGCACCAGTGACTTTATCTGCATTGGCATTGTCGCCCTACCGCTAACGATGGTGATTGTCAGTGGCGGGATCGATATTTCGTTTGGTTCG  >  NC_000913/1604052‑1604247

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`