BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	2,048,065	T→C	V1043A (GTT→GCT)	yeeJ →	inverse autotransporter adhesin

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	2,048,065	0	T	C	100.0%	1218.8 / NA	294	V1043A (GTT→GCT)	yeeJ	inverse autotransporter adhesin
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (127/167); total (127/167)

Only 100 of 294 total aligned reads displayed.

CACGTTAGCGGGCACGCATATGATCATGGCTCGTCTGGCTAACAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGTTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAACTCTGACAGCAACAGTGAAAGATCCGTCGAATCATCCGGTG  >  NC_000913/2047967‑2048162

cACGTTAGCGGGCACGCATATGATCATGGCTCGTCTGGCTAACAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTg                                                                                                 <  2:3921657/101‑1 (MQ=255)

cACGTTAGCGGGCACGCATATGATCATGGCTCGTCTGGCTAACAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTg                                                                                                 <  1:3921398/101‑1 (MQ=255)

  cGTTAGCGGGCACGCATATGATCATGGCTCGTCTGGCTAACAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTc                                                                                               <  2:3921016/101‑1 (MQ=255)

   gTTAGCGGGCACGCATATGATCATGGCTCGTCTGGCTAACAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCg                                                                                              >  1:3921873/1‑101 (MQ=255)

     tAGCGGGCACGCATATGATCATGGCTCGTCTGGCTAACAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGtt                                                                                            <  2:3921243/101‑1 (MQ=255)

     tAGCGGGCACGCATATGATCATGGCTCGTCTGGCTAACAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGtt                                                                                            <  2:3921561/101‑1 (MQ=255)

       gCGGGCACGCATATGATCATGGCTCGTCTGGCTAACAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGtttt                                                                                          <  1:3921484/101‑1 (MQ=255)

       gCGGGCACGCATATGATCATGGCTCGTCTGGCTAACAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGtttt                                                                                          >  1:3921878/1‑101 (MQ=255)

          ggCACGCATATGATCATGGCTCGTCTGGCTAACAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCa                                                                                       <  2:3921216/101‑1 (MQ=255)

           gCACGCATATGATCATGGCTCGTCTGGCTAACAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCaa                                                                                      <  2:3921506/101‑1 (MQ=255)

              cGCATATGATCATGGCTCGTCTGGCTAACAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACa                                                                                   <  2:3921433/101‑1 (MQ=255)

               gCATATGATCATGGCTCGTCTTGCTAACAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGGTTTGCAAACAt                                                                                  >  1:3921884/1‑101 (MQ=255)

                    tGATCATGGCTCGTCTGGCTAACAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGaaa                                                                             <  2:3921333/101‑1 (MQ=255)

                     gATCATGGCTCGTCTGGCTAACAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAg                                                                            <  2:3921194/101‑1 (MQ=255)

                      aTCATGGCTCGTCTGGCTAACAGCAATGTCAGCGGTGCAAAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTTCaaa                                                                                     >  1:3921889/1‑91 (MQ=255)

                        cATGGCTCGTCTGGCTAACAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCgg                                                                         <  1:3921002/101‑1 (MQ=255)

                        cATGGCTCGTCTGGCTAACAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCgg                                                                         >  1:3921894/1‑101 (MQ=255)

                           ggCTCGTCTGGCTAACAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGaaa                                                                      <  1:3921452/101‑1 (MQ=255)

                            gCTCGTCTGGCTAACAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAAt                                                                     <  1:3921135/101‑1 (MQ=255)

                            gCTCGTCTGGCTAACAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAAt                                                                     <  1:3921246/101‑1 (MQ=255)

                              tCGTCTGGCTAACAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCa                                                                   <  2:3921314/101‑1 (MQ=255)

                               cGTCTGGCTAACAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCAt                                                                  >  1:3921898/1‑101 (MQ=255)

                               cGTCTGGCTAACAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCAt                                                                  <  2:3921748/101‑1 (MQ=255)

                                gTCTGGCTAACAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCAtt                                                                 <  1:3921348/101‑1 (MQ=255)

                                gTCTGGCTAACAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCAtt                                                                 >  1:3921901/1‑101 (MQ=255)

                                  cTGGCTAACAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTgg                                                               <  2:3921495/101‑1 (MQ=255)

                                  cTGGCTAACAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTgg                                                               <  2:3921513/101‑1 (MQ=255)

                                  cTGGCTAACAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTgg                                                               >  1:3921906/1‑101 (MQ=255)

                                  cTGGCTAACAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTgg                                                               >  2:3921905/1‑101 (MQ=255)

                                   tGGCTAACAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCgg                                                                         >  1:3921912/1‑90 (MQ=255)

                                   tGGCTAACAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTggg                                                              >  2:3921910/1‑101 (MQ=255)

                                    ggCTAACAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGa                                                             <  2:3921594/101‑1 (MQ=255)

                                    ggCTAACAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGa                                                             <  1:3921286/101‑1 (MQ=255)

                                    ggCTAACAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGa                                                             <  1:3921217/101‑1 (MQ=255)

                                      cTAACAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAAt                                                           <  2:3921395/101‑1 (MQ=255)

                                      cTAACAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAAt                                                           >  2:3921916/1‑101 (MQ=255)

                                       tAACAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATg                                                          >  2:3921918/1‑101 (MQ=255)

                                       tAACAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATg                                                          <  2:3921379/101‑1 (MQ=255)

                                       caaCAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTggg                                                              >  1:3921920/2‑97 (MQ=255)

                                         aCAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGc                                                        <  1:3921596/101‑1 (MQ=255)

                                          cAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCg                                                       <  2:3921469/101‑1 (MQ=255)

                                           aGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGt                                                      <  1:3921666/101‑1 (MQ=255)

                                           aGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGt                                                      >  2:3921924/1‑101 (MQ=255)

                                            gCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTg                                                                                                 >  2:3921928/1‑57 (MQ=255)

                                            gCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTg                                                     <  1:3921162/101‑1 (MQ=255)

                                             cAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTgg                                                    >  1:3921929/1‑101 (MQ=255)

                                              aaTGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGa                                                   <  2:3921584/101‑1 (MQ=255)

                                              aaTGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGa                                                   <  2:3921416/101‑1 (MQ=255)

                                               aTGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGAt                                                  <  1:3921436/101‑1 (MQ=255)

                                                tGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTg                                                                                                 >  1:3921936/1‑53 (MQ=255)

                                                tGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATg                                                 <  1:3921269/101‑1 (MQ=255)

                                                 gTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATga                                                <  1:3921310/101‑1 (MQ=255)

                                                 gTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATga                                                <  2:3921353/101‑1 (MQ=255)

                                                   cAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATgaga                                              >  1:3921942/1‑101 (MQ=255)

                                                    aGCGATGCACTGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGAc                                             >  2:3921944/1‑101 (MQ=255)

                                                    aGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGAc                                             >  1:3921946/1‑101 (MQ=255)

                                                       gATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGttg                                                                                              >  2:3921950/1‑47 (MQ=38)

                                                        aTGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAAct                                         <  2:3921106/101‑1 (MQ=255)

                                                            acaGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAACTCTGa                                     >  1:3921953/1‑101 (MQ=255)

                                                            acaGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAACTCTGa                                     <  2:3921447/101‑1 (MQ=255)

                                                              aGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATgaga                                              >  2:3921955/1‑90 (MQ=255)

                                                                ccAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAACTCTGACAGc                                 <  1:3921499/101‑1 (MQ=255)

                                                                ccAATGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAACTCTGACAGc                                 >  2:3921960/1‑101 (MQ=255)

                                                                  aaTGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGcaa                                                                      >  2:3921965/1‑62 (MQ=255)

                                                                  aaTGACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAACTCTGACAGCaa                               >  1:3921963/1‑101 (MQ=255)

                                                                     gACGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAACTCTGACAGCAACAg                            <  1:3921449/101‑1 (MQ=255)

                                                                      aCGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAACTCTGACAGCAACAGt                           <  1:3921620/101‑1 (MQ=255)

                                                                       cGTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAACTCTGACAGCAACAGTg                          >  2:3921969/1‑101 (MQ=255)

                                                                        gTTTGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAACTCTGACAGCAACAGTGa                         >  1:3921971/1‑101 (MQ=255)

                                                                         tttGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAACTCTGACAGCAACAGTGaa                        >  1:3921975/1‑101 (MQ=255)

                                                                          ttGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAACTCTGACAGCAACAGTGaaa                       >  2:3921978/1‑101 (MQ=255)

                                                                          ttGTGGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAACTCTGACAGCAACAGTGaaa                       <  1:3921420/101‑1 (MQ=255)

                                                                          ctgtgGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAACTCTGACAGCAACAGTGaaa                       >  1:3921980/2‑101 (MQ=255)

                                                                           tgtgGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAACTCTGACAGCAACAGTGaa                        <  1:3921387/99‑1 (MQ=255)

                                                                           tgtgGCGGAAAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAACTCTGACAGCAACAGTGAAAg                      >  2:3921983/1‑101 (MQ=255)

                                                                             tgGCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAACTCTGACAGCAACAGTGAAAGAt                    <  2:3921527/101‑1 (MQ=255)

                                                                              ggCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAACTCTGACAGCAACAGTGAAAGATc                   <  1:3921329/101‑1 (MQ=255)

                                                                              ggCGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAACTCTGACAGCAACAGTGAAAGATc                   >  1:3921986/1‑101 (MQ=255)

                                                                                cGGATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGa                                                                               >  2:3921990/1‑39 (MQ=255)

                                                                                 ggATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAACTCTGACAGCAACAGTGAAAGATCCGt                <  1:3921363/101‑1 (MQ=255)

                                                                                 ggATAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAACTCTGACAGCAACAGTGAAAGATCCGt                <  1:3921553/101‑1 (MQ=255)

                                                                                   aTAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAACTCTGACAGCAACAGTGAAAGa                     >  2:3921996/1‑94 (MQ=255)

                                                                                   aTAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAACTCTGACAGCAACAGTGAAAGATCCGt                <  2:3921633/99‑1 (MQ=255)

                                                                                   aTAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAACTCTGACAGCAACAGTGAAAGATCCGTCg              >  1:3921992/1‑101 (MQ=255)

                                                                                   aTAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAACTCTGACAGCAACAGTGAAAGATCCGTCg              >  1:3921995/1‑101 (MQ=255)

                                                                                   aTAAAGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAACTCTGACAGCAACAGTGAAAGATCCGTCg              <  1:3921458/101‑1 (MQ=255)

                                                                                     aaaGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAACTCTGACAGCAACAGTGAAAGATCCGTCGaa            <  1:3921742/101‑1 (MQ=255)

                                                                                     aaaGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAACTCTGACAGCAACAGTGAAAGATCCGTCGaa            <  1:3921673/101‑1 (MQ=255)

                                                                                     aaaGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAACTCTGACAGCAACAGTGAAAGATCCGTCGaa            <  1:3921541/101‑1 (MQ=255)

                                                                                     aaaGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAACTCTGACAGCAACAGTGAAAGATCCGTCGaa            <  1:3921466/101‑1 (MQ=255)

                                                                                      aaGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAACTCTGACAGCAACAGTGAAAGATCCGTCGAat           <  2:3921267/101‑1 (MQ=255)

                                                                                      aaGACAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAACTCTGACAGCAACAGTGAAAGATCCGTCGAat           >  1:3921999/1‑101 (MQ=255)

                                                                                         aCAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAACTCTGACAGCAACAGTGAAAGATCCGTCGAatcat        <  2:3921426/101‑1 (MQ=255)

                                                                                         aCAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAACTCTGACAGCAACAGTGAAAGATCCGTCGAatcat        >  2:3922004/1‑101 (MQ=255)

                                                                                          cAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAACTCTGACAGCAACAGTGAAAGATCCGTCGAatcatc       >  1:3922007/1‑101 (MQ=255)

                                                                                          cAGAGCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAACTCTGACAGCAACAGTGAAAGATCCGTCGAatcatc       >  2:3922008/1‑101 (MQ=255)

                                                                                           agagCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAACTCTGACAGCAACAGTGAAAGATCCGTCGAATCATcc      >  2:3922012/1‑101 (MQ=255)

                                                                                             agCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAACTCTGACAGCAACAGTGAAAGATCCGTCGAATCATCCgg    <  1:3921645/101‑1 (MQ=255)

                                                                                              gCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAACTCTGACAGCAACAGTGAAAGATCCGTCGAATCATCCGGt   <  2:3921572/101‑1 (MQ=255)

                                                                                              gCGGCTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAACTCTGACAGCAACAGTGAAAGATCCGTCGAATCATCCGGt   <  1:3921820/101‑1 (MQ=255)

CACGTTAGCGGGCACGCATATGATCATGGCTCGTCTGGCTAACAGCAATGTCAGCGATGCACAGCCAATGACGTTTGTGGCGGATAAAGACAGAGCGGTTGTCGTTTTGCAAACATCGAAAGCGGAAATCATTGGGAATGGCGTGGATGAGACAACTCTGACAGCAACAGTGAAAGATCCGTCGAATCATCCGGTG  >  NC_000913/2047967‑2048162

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`