Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,442,210 G→A T149T (ACG→ACA)  mnmC → fused 5‑methylaminomethyl‑2‑thiouridine‑forming methyltransferase and FAD‑dependent demodification enzyme

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,442,2100GA100.0% 1552.6 / NA 362T149T (ACG→ACA) mnmCfused 5‑methylaminomethyl‑2‑thiouridine‑forming methyltransferase and FAD‑dependent demodification enzyme
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (143/219);  total (143/219)

Only 100 of 362 total aligned reads displayed.

TGGCCGGAACTGGCTCCGTGGGCAGAACAACTTCAGGCGCAGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACGCTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTCGCTAAATCAAAAAGTAGATGCCTGGTTTCTGGACGGCTTTGCGC  >  NC_000913/2442112‑2442307
                                                                                                  |                                                                                                 
tGGCCGGAACTGGCTCCGTGGGCAGAACAACTTCAGGCGCAGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACt                                                                                                 >  1:4678110/1‑101 (MQ=255)
tGGCCGGAACTGGCTCCGTGGGCAGAACAACTTCAGGCGCAGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACt                                                                                                 <  1:4677413/101‑1 (MQ=255)
tGGCCGGAACTGGCTCCGTGGGCAGAACAACTTCAGGCGCAGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACt                                                                                                 <  1:4677558/101‑1 (MQ=255)
tGGCCGGAACTGGCTCCGTGGGCAGAACAACTTCAGGCGCAGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACt                                                                                                 <  2:4677435/101‑1 (MQ=255)
  gCCGGAACTGGCTCCGTGGGCAGAACAACTTCAGGCGCAGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTgg                                                                                               <  1:4677702/101‑1 (MQ=255)
   ccGGAACTGGCTCCGTGGGCAGAACAACTTCAGGCGCAGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTgg                                                                                               >  1:4678117/1‑100 (MQ=255)
    cGGAACTGGCTCCGTGGGCAGAACAACTTCAGGCGCAGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGAt                                                                                             <  1:4677632/101‑1 (MQ=255)
    cGGAACTGGCTCCGTGGGCAGAACAACTTCAGGCGCAGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGAt                                                                                             <  2:4677457/101‑1 (MQ=255)
     ggAACTGGCTCCGTGGGCAGAACAACTTCAGGCGCAGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGAtt                                                                                            <  2:4677288/101‑1 (MQ=255)
     ggAACTGGCTCCGTGGGCAGAACAACTTCAGGCGCAGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGAtt                                                                                            >  2:4678121/1‑101 (MQ=255)
          tGGCTCCGTGGGCAGAACAACTTCAGGCGCAGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTGTTGCTCGATGAAGGCCGCGTGACACTGGATTTATgg                                                                                       >  2:4678126/1‑101 (MQ=255)
          tGGCTCCGTGGGCAGAACAACTTCAGGCGCAGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATgg                                                                                       >  1:4678129/1‑101 (MQ=255)
           ggCTCCGTGGGCAGAACAACTTCAGGCGCAGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGt                                                                                      >  1:4678132/1‑101 (MQ=255)
           ggCTCCGTGGGCAGAACAACTTCAGGCGCAGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGt                                                                                      <  1:4677389/101‑1 (MQ=255)
            gCTCCGTGGGCAGAACAACTTCAGGCGCAGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGtt                                                                                     <  2:4677742/101‑1 (MQ=255)
             cTCCGTGGGCAGAACAACTTCAGGCGCAGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGa                                                                                              <  1:4677568/91‑1 (MQ=255)
             cTCCGTGGGCAGAACAACTTCAGGCGCAGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGttt                                                                                    >  2:4678134/1‑101 (MQ=255)
             cTCCGTGGGCAGAACAACTTCAGGCGCAGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGttt                                                                                    <  2:4677690/101‑1 (MQ=255)
               ccGTGGGCAGAACAACTTCAGGCGCAGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTgg                                                                                  <  1:4677614/101‑1 (MQ=255)
                 gTGGGCAGAACAACTTCAGGCGCAGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCg                                                                                <  1:2123368/101‑1 (MQ=255)
                  tGGGCAGAACAACTTCAGGCGCAGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGa                                                                               >  1:4678141/1‑101 (MQ=255)
                     gCAGAACAACTTCAGGCGCAGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGatat                                                                            >  2:4678144/1‑101 (MQ=255)
                       aGAACAACTTCAGGCGCAGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTa                                                                          >  1:4678146/1‑101 (MQ=255)
                          acaacTTCAGGCGCAGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACg                                                                       >  1:4678152/1‑101 (MQ=255)
                           caacTTCAGGCGCAGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGa                                                                      <  2:4677525/101‑1 (MQ=255)
                            aacTTCAGGCGCAGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGaa                                                                     <  1:4677199/101‑1 (MQ=255)
                            aacTTCAGGCGCAGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGaa                                                                     >  2:4678154/1‑101 (MQ=255)
                            aacTTCAGGCGCAGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGaa                                                                     <  1:4677593/101‑1 (MQ=255)
                             acTTCAGGCGCAGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAAc                                                                    <  1:4677352/101‑1 (MQ=255)
                               ttCAGGCGCAGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTg                                                                  <  1:4677298/101‑1 (MQ=255)
                               ttCAGGCGCAGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTg                                                                  <  1:4677439/101‑1 (MQ=255)
                                 cAGGCGCAGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGAc                                                                >  2:4678159/1‑101 (MQ=255)
                                  aGGCGCAGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGAcc                                                               <  1:4677765/101‑1 (MQ=255)
                                  aGGCGCAGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGAcc                                                               >  1:4678161/1‑101 (MQ=255)
                                   ggCGCAGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCa                                                              <  1:4677918/101‑1 (MQ=255)
                                      gcAGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGcc                                                           >  1:4678165/1‑101 (MQ=255)
                                       cAGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCa                                                          <  1:4677623/101‑1 (MQ=255)
                                       cAGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCa                                                          <  2:4677609/101‑1 (MQ=255)
                                       cAGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCa                                                          <  2:4677552/101‑1 (MQ=255)
                                        aGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCaa                                                         <  1:4677424/101‑1 (MQ=255)
                                        aGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCaa                                                         >  2:4678169/1‑101 (MQ=255)
                                         gTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAAc                                                        >  1:4678171/1‑101 (MQ=255)
                                          tGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACt                                                       <  2:4677683/101‑1 (MQ=255)
                                           ggCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTg                                                      <  1:4677656/101‑1 (MQ=255)
                                           ggCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTg                                                      <  1:4677524/101‑1 (MQ=255)
                                           ggCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTg                                                      <  1:4677754/101‑1 (MQ=255)
                                             ccAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGa                                                    <  1:4678001/101‑1 (MQ=255)
                                              cAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGAc                                                   <  2:4677877/101‑1 (MQ=255)
                                              cAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGAc                                                   >  2:4678177/1‑101 (MQ=255)
                                              cAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGAc                                                   <  1:4677714/101‑1 (MQ=255)
                                              cAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGAc                                                   <  1:4677737/101‑1 (MQ=255)
                                               aaTGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACg                                                  <  1:4677585/101‑1 (MQ=255)
                                               aaTGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACg                                                  >  1:4678180/1‑101 (MQ=255)
                                                 tGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGAt                                                <  2:4677544/101‑1 (MQ=255)
                                                  gCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGAt                                                >  2:4678185/1‑100 (MQ=255)
                                                   cccTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACt                                                       <  1:4677455/92‑1 (MQ=255)
                                                   cccTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTc                                              <  1:4677674/101‑1 (MQ=255)
                                                    ccTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGAt                                                >  2:4678189/1‑98 (MQ=255)
                                                    ccTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTCg                                             >  1:4678188/1‑101 (MQ=255)
                                                     cTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACt                                                                   <  2:4677494/78‑1 (MQ=255)
                                                       tGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTCGCTa                                          <  2:4677513/101‑1 (MQ=255)
                                                        gCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTCGCTaa                                         >  2:4678194/1‑101 (MQ=255)
                                                          ccGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTCGCTAAAt                                       <  2:4677380/101‑1 (MQ=255)
                                                           cGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTCGCTAAATc                                      >  2:4678200/1‑101 (MQ=255)
                                                            ggTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTCGCTAAATCa                                     >  1:4678201/1‑101 (MQ=255)
                                                             gTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTCGCTAAATCaa                                    >  2:4678204/1‑101 (MQ=255)
                                                               tGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGa                                                                 <  2:4677839/70‑1 (MQ=255)
                                                               tGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTCGCTAAATCaaaa                                  <  2:4678042/101‑1 (MQ=255)
                                                                  cATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTCGCTAAATCAAAAAGt                               >  1:4678207/1‑101 (MQ=255)
                                                                  cATCGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTCGCTAAATCAAAAAGt                               <  1:4677546/101‑1 (MQ=255)
                                                                     cGTTTATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTCGCTAAATCAAAAAGTAGa                            <  1:4677478/101‑1 (MQ=255)
                                                                       tttATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTCGCTAAATCAAAAAGTAGATg                          <  1:4677832/101‑1 (MQ=255)
                                                                       tttATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTCGCTAAATCAAAAAGTAGATg                          <  2:4677903/101‑1 (MQ=255)
                                                                       tttATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTCGCTAAATCAAAAAGTAGATg                          <  2:4677563/101‑1 (MQ=255)
                                                                       tttATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTCGCTAAATCAAAAAGTAGATg                          >  1:4678214/1‑101 (MQ=255)
                                                                        ttATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTCGCTAAATCAAAAAGTAGATGc                         <  2:4677580/101‑1 (MQ=255)
                                                                        ttATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTCGCTAAATCAAAAAGTAGATGc                         >  2:4678215/1‑101 (MQ=255)
                                                                         tATTGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTCGCTAAATCAAAAAGTAGATGcc                        <  2:4677575/101‑1 (MQ=255)
                                                                           ttGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTCGCTAAATCAAAAAGTAGATGCCTg                      <  2:4677422/101‑1 (MQ=255)
                                                                           ttGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTCGCTAAATCAAAAAGTAGATGCCTg                      <  2:4677780/101‑1 (MQ=255)
                                                                           ttGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTCGCTAAATCAAAAAGTAGATGCCTg                      >  2:4678219/1‑101 (MQ=255)
                                                                           ttGCTCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTCGCTAAATCAAAAAGTAGATGCCTg                      <  2:4677447/101‑1 (MQ=255)
                                                                              cTCGATGAAGGCCACGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTCGCTAAATCAAAAAGTAGATGCCTGGtt                   >  2:4678225/1‑101 (MQ=255)
                                                                               tCGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTCGCTAAATCAAAAAGTAGATGCCTGGttt                  >  1:4678227/1‑101 (MQ=255)
                                                                                cGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTCGCTAAATCAAAAAGTAGATGCCTGGTTTc                 <  2:4677647/101‑1 (MQ=255)
                                                                                cGATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTCGCTAAATCAAAAAGTAGATGCCTGGTTTc                 <  2:4677195/101‑1 (MQ=255)
                                                                                 gATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTCGCTAAATCAAAAAGTAGATGCCTGGTTTCt                <  2:4677660/101‑1 (MQ=255)
                                                                                 gATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTCGCTAAATCAAAAAGTAGATGCCTGGTTTCt                >  2:4678233/1‑101 (MQ=255)
                                                                                 gATGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTCGCTAAATCAAAAAGTAGATGCCTGGTTTCt                >  1:4678232/1‑101 (MQ=255)
                                                                                  aTGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTCGCTAAATCAAAAAGTAGATGCCTGGTTTCTg               <  2:4677762/101‑1 (MQ=255)
                                                                                  aTGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTCGCTAAATCAAAAAGTAGATGCCTGGTTTCTg               <  2:4677703/101‑1 (MQ=255)
                                                                                  aTGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTCGCTAAATCAAAAAGTAGATGCCTGGTTTCTg               <  1:4677488/101‑1 (MQ=255)
                                                                                   tGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTCGCTAAATCAAAAAGTAGATGCCTGGTTTCTgg              <  2:4677800/101‑1 (MQ=255)
                                                                                   tGAAGGCCGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTCGCTAAATCAAAAAGTAGATGCCTGGTTTCTgg              >  2:4678237/1‑101 (MQ=255)
                                                                                         ccGCGTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTCGCTAAATCAAAAAGTAGATGCCTGGTTTCTGGACGGCt        >  1:4678241/1‑101 (MQ=255)
                                                                                          cgcgTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTCGCTAAATCAAAAAGTAGATGCCTGGTTTCTGGACGGCtt       <  1:4677503/101‑1 (MQ=255)
                                                                                            cgTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTCGCTAAATCAAAAAGTAGATGCCTGGTTTCTGGACGGCTTTg     >  2:4678247/1‑101 (MQ=255)
                                                                                             gTGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTCGCTAAATCAAAAAGTAGATGCCTGGTTTCTGGACGGCTTTgc    >  1:4678249/1‑101 (MQ=255)
                                                                                              tGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTCGCTAAATCAAAAAGTAGATGCCTGGTTTCTGGACGGCTTTgcg   >  1:4678252/1‑101 (MQ=255)
                                                                                              tGACACTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTCGCTAAATCAAAAAGTAGATGCCTGGTTTCTGGACGGCTTTgcg   <  1:4677646/101‑1 (MQ=255)
                                                                                                  |                                                                                                 
TGGCCGGAACTGGCTCCGTGGGCAGAACAACTTCAGGCGCAGTGGCCAATGCCCTTGCCCGGTTGCCATCGTTTATTGCTCGATGAAGGCCGCGTGACGCTGGATTTATGGTTTGGCGATATTAACGAACTGACCAGCCAACTGGACGATTCGCTAAATCAAAAAGTAGATGCCTGGTTTCTGGACGGCTTTGCGC  >  NC_000913/2442112‑2442307

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑