BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,213,306	T→C	V87A (GTG→GCG)	rpoD →	RNA polymerase, sigma 70 (sigma D) factor

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,213,306	0	T	C	100.0%	1353.8 / NA	326	V87A (GTG→GCG)	rpoD	RNA polymerase, sigma 70 (sigma D) factor
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (152/174); total (152/174)

Only 100 of 330 total aligned reads displayed.

GTGATGGAAGAAGCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATC  >  NC_000913/3213209‑3213403

 tGATGGAAGAAGCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGaa                                                                                               >  1:6184743/1‑101 (MQ=255)

  gATGGAAGAAGCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAAt                                                                                              <  1:6184050/101‑1 (MQ=255)

   aTGGAAGAAGCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATc                                                                                             >  2:6184747/1‑101 (MQ=255)

      gaagaaGCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATc                                                                                             >  2:6184754/1‑98 (MQ=255)

      gaagaaGCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGa                                                                                          >  1:6184753/1‑101 (MQ=255)

       aagaagCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGaa                                                                                         <  1:6184333/101‑1 (MQ=255)

        agaagCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGaaa                                                                                        >  2:6184759/1‑101 (MQ=255)

        agaagCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGaaa                                                                                        <  1:6184315/101‑1 (MQ=255)

          aagCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATc                                                                                      >  1:6184763/1‑101 (MQ=255)

          aagCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATc                                                                                      <  1:6184163/101‑1 (MQ=255)

           agCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCg                                                                                     <  1:6183600/101‑1 (MQ=255)

            gCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCgg                                                                                    <  2:6184170/101‑1 (MQ=255)

            gCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCgg                                                                                    >  1:6184766/1‑101 (MQ=255)

             cACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCggg                                                                                   <  2:6183879/101‑1 (MQ=255)

             cACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCggg                                                                                   <  1:6184131/101‑1 (MQ=255)

               ccGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGaa                                                                                               <  2:6184149/87‑1 (MQ=255)

               ccGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGgcg                                                                                 >  2:6184770/1‑101 (MQ=255)

               ccGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGgcg                                                                                 <  1:6184527/101‑1 (MQ=255)

                 ggATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCa                                                                               <  2:6184266/101‑1 (MQ=255)

                  gATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCAc                                                                              <  1:6184232/101‑1 (MQ=255)

                  gATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCAc                                                                              <  2:6184190/101‑1 (MQ=255)

                   aTGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCggg                                                                                   >  2:6184774/1‑95 (MQ=255)

                   aTGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACg                                                                             <  2:6184335/101‑1 (MQ=255)

                    tGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGa                                                                            >  1:6184775/1‑101 (MQ=255)

                     gCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGAc                                                                           <  1:6184183/101‑1 (MQ=255)

                      ccGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACt                                                                          <  2:6183906/101‑1 (MQ=255)

                      ccGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACt                                                                          <  1:6184260/101‑1 (MQ=255)

                       cGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGgcg                                                                                 >  2:6184782/1‑93 (MQ=255)

                        gatgatCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGa                                                                        >  1:6184783/1‑101 (MQ=255)

                           gatCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGAccc                                                                     >  1:6184789/1‑101 (MQ=255)

                            atCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCg                                                                    >  2:6184791/1‑101 (MQ=255)

                             tCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCgg                                                                   >  1:6184792/1‑101 (MQ=255)

                             tCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCgg                                                                   <  2:6184137/101‑1 (MQ=255)

                              cTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGt                                                                  <  2:6184439/101‑1 (MQ=255)

                                gATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTAc                                                                >  1:6184799/1‑101 (MQ=255)

                                gATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTAc                                                                >  2:6184798/1‑101 (MQ=255)

                                  tGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGgcg                                                                                 >  2:6184807/1‑82 (MQ=255)

                                  tGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGc                                                              >  1:6184805/1‑101 (MQ=255)

                                    ctggctgAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCAt                                                            <  1:6184215/101‑1 (MQ=255)

                                     tggctgAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATg                                                           <  1:6184167/101‑1 (MQ=255)

                                      ggctgAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGt                                                          >  2:6184811/1‑101 (MQ=255)

                                      ggctgAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGt                                                          <  1:6183859/101‑1 (MQ=255)

                                       gctgAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTa                                                         <  2:6184184/101‑1 (MQ=255)

                                         tgAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACa                                                       >  1:6184816/1‑101 (MQ=255)

                                          gAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACAt                                                      <  2:6184021/101‑1 (MQ=255)

                                            aaaCACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGc                                                    >  2:6184821/1‑101 (MQ=255)

                                            aaaCACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGc                                                    <  2:6183999/101‑1 (MQ=255)

                                            aaaCACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGc                                                    <  1:6184403/101‑1 (MQ=255)

                                            aaaCACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGc                                                    >  1:6184819/1‑101 (MQ=255)

                                             aaCACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCg                                                   <  2:6184383/101‑1 (MQ=255)

                                                acCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCAc                                                                              <  2:6184205/71‑1 (MQ=255)

                                                acCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGa                                                >  2:6184827/1‑101 (MQ=255)

                                                 ccGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGAc                                                                           <  2:6184142/73‑1 (MQ=255)

                                                 ccGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGaa                                               <  2:6184578/101‑1 (MQ=255)

                                                 ccGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGaa                                               <  2:6184090/101‑1 (MQ=255)

                                                   gcgGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAAt                                             <  1:6184430/101‑1 (MQ=255)

                                                   gcgGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAAt                                             <  2:6184645/101‑1 (MQ=255)

                                                   gcgGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAAt                                             <  1:6184291/101‑1 (MQ=255)

                                                   gcgGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAAt                                             <  1:6184278/101‑1 (MQ=255)

                                                   gcgGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAAt                                             >  1:6184829/1‑101 (MQ=255)

                                                    cgGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATg                                            >  2:6184833/1‑101 (MQ=255)

                                                    cgGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATg                                            <  1:6184084/101‑1 (MQ=255)

                                                    cgGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATg                                            >  1:6184834/1‑101 (MQ=255)

                                                    cgGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATg                                            <  2:6184052/101‑1 (MQ=255)

                                                        cGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCa                                        >  1:6184838/1‑101 (MQ=255)

                                                         gAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCa                                        <  1:6184065/100‑1 (MQ=255)

                                                         gAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCAc                                       <  2:6184469/101‑1 (MQ=255)

                                                          aaGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCAcc                                      >  2:6184843/1‑101 (MQ=255)

                                                             aTGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGtt                                   >  1:6184847/1‑101 (MQ=255)

                                                             aTGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGtt                                   <  2:6184281/101‑1 (MQ=255)

                                                              tgctgcCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTg                                  >  2:6184848/1‑101 (MQ=255)

                                                               gctgcCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGa                                 <  2:6184224/101‑1 (MQ=255)

                                                               gctgcCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGa                                 <  2:6184289/101‑1 (MQ=255)

                                                                 tgcCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAAc                               >  1:6184852/1‑101 (MQ=255)

                                                                  gcCGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAAc                               >  2:6184854/1‑100 (MQ=255)

                                                                    cGAAGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGt                            >  2:6184858/1‑101 (MQ=255)

                                                                      aaGCCGCCGCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTg                          >  1:6184861/1‑101 (MQ=255)

                                                                         ccgccgCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGAcc                       <  1:6184359/101‑1 (MQ=255)

                                                                         ccgccgCGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGAcc                       >  2:6184864/1‑101 (MQ=255)

                                                                           gccgcGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCcg                     <  1:6184482/101‑1 (MQ=255)

                                                                           gccgcGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCcg                     <  2:6184366/101‑1 (MQ=255)

                                                                           gccgcGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCcg                     >  2:6184867/1‑101 (MQ=255)

                                                                           gccgcGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCcg                     <  2:6184248/101‑1 (MQ=255)

                                                                            ccgcGCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCcgc                    >  2:6184870/1‑101 (MQ=255)

                                                                             cgcgCAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCcgcg                   <  2:6184304/101‑1 (MQ=255)

                                                                               cgcAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGaa                 <  1:6184570/101‑1 (MQ=255)

                                                                                gcAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAg                <  2:6184404/101‑1 (MQ=255)

                                                                                gcAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAg                >  2:6184878/1‑101 (MQ=255)

                                                                                gcAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAg                >  1:6184875/1‑101 (MQ=255)

                                                                                 cAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAgg               <  1:6184664/101‑1 (MQ=255)

                                                                                 cAGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAgg               >  1:6184881/1‑101 (MQ=255)

                                                                                  aGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGc              <  1:6184264/101‑1 (MQ=255)

                                                                                  aGGTGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGc              >  1:6184885/1‑101 (MQ=255)

                                                                                     tGCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGaa           >  2:6184889/1‑101 (MQ=255)

                                                                                      gCTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGaaa          >  1:6184890/1‑101 (MQ=255)

                                                                                       cTTTCCAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAAt         <  1:6184013/101‑1 (MQ=255)

                                                                                            cAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACa    <  2:6184228/101‑1 (MQ=255)

                                                                                            cAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACa    >  1:6184895/1‑101 (MQ=255)

                                                                                            cAGCGCGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACa    >  2:6184897/1‑101 (MQ=255)

                                                                                              gcgcGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATc  <  2:6184321/101‑1 (MQ=255)

GTGATGGAAGAAGCACCGGATGCCGATGATCTGATGCTGGCTGAAAACACCGCGGACGAAGATGCTGCCGAAGCCGCCGCGCAGGTGCTTTCCAGCGTGGAATCTGAAATCGGGCGCACGACTGACCCGGTACGCATGTACATGCGTGAAATGGGCACCGTTGAACTGTTGACCCGCGAAGGCGAAATTGACATC  >  NC_000913/3213209‑3213403

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`